RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 COPB1P53618 953 aaKnown RBP16.2■□□□□ 0.18
SMG6-215ENST00000574501 SETQ01105 290 aaPredicted RBP16.2■□□□□ 0.18
SMG6-215ENST00000574501 TMEM67Q5HYA8 995 aa16.2■□□□□ 0.18
SMG6-215ENST00000574501 ZNF579Q8NAF0 562 aaKnown RBP16.2■□□□□ 0.18
SMG6-215ENST00000574501 AIDAQ96BJ3 306 aa16.2■□□□□ 0.18
SMG6-215ENST00000574501 ARL8AQ96BM9 186 aa16.2■□□□□ 0.18
SMG6-215ENST00000574501 CABS1Q96KC9 395 aa16.2■□□□□ 0.18
SMG6-215ENST00000574501 HAUS4Q9H6D7 363 aa16.2■□□□□ 0.18
SMG6-215ENST00000574501 LY9Q9HBG7 655 aa16.2■□□□□ 0.18
SMG6-215ENST00000574501 FAM184BQ9ULE4 1060 aa16.2■□□□□ 0.18
SMG6-215ENST00000574501 SEMA3EO15041 775 aa16.2■□□□□ 0.18
SMG6-215ENST00000574501 ZFYP08048 801 aaPredicted RBP16.2■□□□□ 0.18
SMG6-215ENST00000574501 UBXN1Q04323 297 aa16.2■□□□□ 0.18
SMG6-215ENST00000574501 GBP6Q6ZN66 633 aa16.2■□□□□ 0.18
SMG6-215ENST00000574501 OTUD6BQ8N6M0 293 aa16.2■□□□□ 0.18
SMG6-215ENST00000574501 AENQ8WTP8 325 aaKnown RBP16.2■□□□□ 0.18
SMG6-215ENST00000574501 SH3GL2Q99962 352 aa16.2■□□□□ 0.18
SMG6-215ENST00000574501 BLZF1Q9H2G9 400 aa16.2■□□□□ 0.18
SMG6-215ENST00000574501 JADE2Q9NQC1 790 aa16.2■□□□□ 0.18
SMG6-215ENST00000574501 STRN4Q9NRL3 753 aa16.2■□□□□ 0.18
SMG6-215ENST00000574501 ECM29Q5VYK3 1845 aa16.2■□□□□ 0.18
SMG6-215ENST00000574501 TTC26A0AVF1 554 aa16.19■□□□□ 0.18
SMG6-215ENST00000574501 PES1O00541 588 aaKnown RBP16.19■□□□□ 0.18
SMG6-215ENST00000574501 FMNL1O95466 1100 aaPredicted RBP16.19■□□□□ 0.18
SMG6-215ENST00000574501 FNTAP49354 379 aa16.19■□□□□ 0.18
SMG6-215ENST00000574501 ATP1A2P50993 1020 aa16.19■□□□□ 0.18
SMG6-215ENST00000574501 CKAP4Q07065 602 aaKnown RBP16.19■□□□□ 0.18
SMG6-215ENST00000574501 TICAM2Q86XR7 235 aa16.19■□□□□ 0.18
SMG6-215ENST00000574501 XAGE2Q96GT9 111 aa16.19■□□□□ 0.18
SMG6-215ENST00000574501 LIMA1Q9UHB6 759 aaKnown RBP16.19■□□□□ 0.18
SMG6-215ENST00000574501 DUSP10Q9Y6W6 482 aa16.19■□□□□ 0.18
SMG6-215ENST00000574501 C5P01031 1676 aa16.19■□□□□ 0.18
SMG6-215ENST00000574501 MST1RQ04912 1400 aa16.19■□□□□ 0.18
SMG6-215ENST00000574501 FAM205CA6NFA0 338 aa16.19■□□□□ 0.18
SMG6-215ENST00000574501 CLGNO14967 610 aa16.19■□□□□ 0.18
SMG6-215ENST00000574501 ZEB2O60315 1214 aa16.19■□□□□ 0.18
SMG6-215ENST00000574501 IBSPP21815 317 aaPredicted RBP16.19■□□□□ 0.18
SMG6-215ENST00000574501 SLC7A5Q01650 507 aa16.19■□□□□ 0.18
SMG6-215ENST00000574501 PPARAQ07869 468 aa16.19■□□□□ 0.18
SMG6-215ENST00000574501 TTMPQ5BVD1 217 aa16.19■□□□□ 0.18
SMG6-215ENST00000574501 RRAGBQ5VZM2 374 aa16.19■□□□□ 0.18
SMG6-215ENST00000574501 KCTD16Q68DU8 428 aa16.19■□□□□ 0.18
SMG6-215ENST00000574501 KIAA1328Q86T90 577 aa16.19■□□□□ 0.18
SMG6-215ENST00000574501 SH2D3CQ8N5H7 860 aa16.19■□□□□ 0.18
SMG6-215ENST00000574501 SYMPKQ92797 1274 aaKnown RBP16.19■□□□□ 0.18
SMG6-215ENST00000574501 MAPK8IP1Q9UQF2 711 aa16.19■□□□□ 0.18
SMG6-215ENST00000574501 SLC12A7Q9Y666 1083 aa16.19■□□□□ 0.18
SMG6-215ENST00000574501 KDM6AO15550 1401 aaPredicted RBP16.19■□□□□ 0.18
SMG6-215ENST00000574501 DDX60Q8IY21 1712 aaKnown RBP16.19■□□□□ 0.18
SMG6-215ENST00000574501 RCCD1A6NED2 376 aa16.18■□□□□ 0.18
SMG6-215ENST00000574501 KIAA0754O94854 1291 aa16.18■□□□□ 0.18
SMG6-215ENST00000574501 MATR3P43243 847 aaKnown RBP eCLIP16.18■□□□□ 0.18
SMG6-215ENST00000574501 TTF1Q15361 905 aaPredicted RBP16.18■□□□□ 0.18
SMG6-215ENST00000574501 LACRTQ9GZZ8 138 aa16.18■□□□□ 0.18
SMG6-215ENST00000574501 CEP126Q9P2H0 1117 aa16.18■□□□□ 0.18
SMG6-215ENST00000574501 DMGDHQ9UI17 866 aaKnown RBP16.18■□□□□ 0.18
SMG6-215ENST00000574501 KCNJ18B7U540 433 aa16.18■□□□□ 0.18
SMG6-215ENST00000574501 GOLGA8KD6RF30 607 aa16.18■□□□□ 0.18
SMG6-215ENST00000574501 IDEP14735 1019 aa16.18■□□□□ 0.18
SMG6-215ENST00000574501 KCNJ12Q14500 433 aa16.18■□□□□ 0.18
SMG6-215ENST00000574501 TCP11X2Q5H9J9 407 aa16.18■□□□□ 0.18
SMG6-215ENST00000574501 TSEN2Q8NCE0 465 aaKnown RBP16.18■□□□□ 0.18
SMG6-215ENST00000574501 RPGRIP1Q96KN7 1286 aa16.18■□□□□ 0.18
SMG6-215ENST00000574501 CCDC85AQ96PX6 553 aaPredicted RBP16.18■□□□□ 0.18
SMG6-215ENST00000574501 LRRC1Q9BTT6 524 aa16.18■□□□□ 0.18
SMG6-215ENST00000574501 VPS54Q9P1Q0 977 aa16.18■□□□□ 0.18
SMG6-215ENST00000574501 MACROD2A1Z1Q3 448 aa16.17■□□□□ 0.18
SMG6-215ENST00000574501 H7C1W4 665 aa16.17■□□□□ 0.18
SMG6-215ENST00000574501 GPTP24298 496 aa16.17■□□□□ 0.18
SMG6-215ENST00000574501 SH3RF1Q7Z6J0 888 aa16.17■□□□□ 0.18
SMG6-215ENST00000574501 ANKLE2Q86XL3 938 aa16.17■□□□□ 0.18
SMG6-215ENST00000574501 OR8K1Q8NGG5 319 aa16.17■□□□□ 0.18
SMG6-215ENST00000574501 GSDMAQ96QA5 445 aa16.17■□□□□ 0.18
SMG6-215ENST00000574501 FOXP1Q9H334 677 aaPredicted RBP16.17■□□□□ 0.18
SMG6-215ENST00000574501 SLC52A2Q9HAB3 445 aa16.17■□□□□ 0.18
SMG6-215ENST00000574501 LRRC10BA6NIK2 292 aa16.17■□□□□ 0.18
SMG6-215ENST00000574501 IFIT3O14879 490 aaKnown RBP16.17■□□□□ 0.18
SMG6-215ENST00000574501 TDO2P48775 406 aa16.17■□□□□ 0.18
SMG6-215ENST00000574501 TRIM14Q14142 442 aa16.17■□□□□ 0.18
SMG6-215ENST00000574501 CEP131Q9UPN4 1083 aa16.17■□□□□ 0.18
SMG6-215ENST00000574501 WDR17Q8IZU2 1322 aa16.16■□□□□ 0.18
SMG6-215ENST00000574501 SCP2P22307 547 aa16.16■□□□□ 0.18
SMG6-215ENST00000574501 HSPA2P54652 639 aa16.16■□□□□ 0.18
SMG6-215ENST00000574501 WDR59Q6PJI9 974 aa16.16■□□□□ 0.18
SMG6-215ENST00000574501 B4GALNT4Q76KP1 1039 aa16.16■□□□□ 0.18
SMG6-215ENST00000574501 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.16■□□□□ 0.18
SMG6-215ENST00000574501 TMEM87BQ96K49 555 aa16.16■□□□□ 0.18
SMG6-215ENST00000574501 ZKSCAN3Q9BRR0 538 aa16.16■□□□□ 0.18
SMG6-215ENST00000574501 MEFVO15553 781 aaPredicted RBP16.16■□□□□ 0.18
SMG6-215ENST00000574501 ATP2B2Q01814 1243 aa16.16■□□□□ 0.18
SMG6-215ENST00000574501 GIMAP7Q8NHV1 300 aa16.16■□□□□ 0.18
SMG6-215ENST00000574501 WASF1Q92558 559 aa16.16■□□□□ 0.18
SMG6-215ENST00000574501 ZKSCAN4Q969J2 545 aaPredicted RBP16.16■□□□□ 0.18
SMG6-215ENST00000574501 RUFY1Q96T51 708 aa16.16■□□□□ 0.18
SMG6-215ENST00000574501 ZSWIM5Q9P217 1185 aa16.16■□□□□ 0.18
SMG6-215ENST00000574501 LUC7L2Q9Y383 392 aaKnown RBP16.16■□□□□ 0.18
SMG6-215ENST00000574501 ARHGAP23Q9P227 1491 aa16.16■□□□□ 0.18
SMG6-215ENST00000574501 KRT86O43790 486 aa16.15■□□□□ 0.18
SMG6-215ENST00000574501 OPA1O60313 960 aa16.15■□□□□ 0.18
SMG6-215ENST00000574501 SNRPA1P09661 255 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms