RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 MIGA1Q8NAN2 632 aa14.54□□□□□ -0.08
CTNS-208ENST00000574218 ACER1Q8TDN7 264 aa14.54□□□□□ -0.08
CTNS-208ENST00000574218 ARHGAP45Q92619 1136 aa14.54□□□□□ -0.08
CTNS-208ENST00000574218 FERMT2Q96AC1 680 aa14.54□□□□□ -0.08
CTNS-208ENST00000574218 TTYH1Q9H313 450 aaPredicted RBP14.54□□□□□ -0.08
CTNS-208ENST00000574218 TACC3Q9Y6A5 838 aa14.54□□□□□ -0.08
CTNS-208ENST00000574218 FPGT-TNNI3KV9GXZ4 949 aa14.54□□□□□ -0.08
CTNS-208ENST00000574218 COL11A1P12107 1806 aaPredicted RBP14.54□□□□□ -0.08
CTNS-208ENST00000574218 MYO9BQ13459 2157 aa14.54□□□□□ -0.08
CTNS-208ENST00000574218 EYSQ5T1H1 3165 aa14.54□□□□□ -0.08
CTNS-208ENST00000574218 TTC28Q96AY4 2481 aa14.53□□□□□ -0.08
CTNS-208ENST00000574218 PNMA6EA0A0J9YXQ4 647 aa14.53□□□□□ -0.08
CTNS-208ENST00000574218 MPHOSPH10O00566 681 aaKnown RBP14.53□□□□□ -0.08
CTNS-208ENST00000574218 IPO8O15397 1037 aaKnown RBP14.53□□□□□ -0.08
CTNS-208ENST00000574218 RAG1P15918 1043 aa14.53□□□□□ -0.08
CTNS-208ENST00000574218 PLS1Q14651 629 aa14.53□□□□□ -0.08
CTNS-208ENST00000574218 COG2Q14746 738 aa14.53□□□□□ -0.08
CTNS-208ENST00000574218 SNX17Q15036 470 aa14.53□□□□□ -0.08
CTNS-208ENST00000574218 LRRC41Q15345 812 aa14.53□□□□□ -0.08
CTNS-208ENST00000574218 TJAP1Q5JTD0 557 aa14.53□□□□□ -0.08
CTNS-208ENST00000574218 NCAPG2Q86XI2 1143 aa14.53□□□□□ -0.08
CTNS-208ENST00000574218 SHCBP1Q8NEM2 672 aa14.53□□□□□ -0.08
CTNS-208ENST00000574218 MOV10L1Q9BXT6 1211 aaKnown RBP14.53□□□□□ -0.08
CTNS-208ENST00000574218 SPATC1LQ9H0A9 340 aa14.53□□□□□ -0.08
CTNS-208ENST00000574218 PIH1D3Q9NQM4 214 aaKnown RBP14.53□□□□□ -0.08
CTNS-208ENST00000574218 U3KPZ7 1027 aaPredicted RBP14.53□□□□□ -0.08
CTNS-208ENST00000574218 POLR3DP05423 398 aaPredicted RBP14.52□□□□□ -0.09
CTNS-208ENST00000574218 CLTBP09497 229 aa14.52□□□□□ -0.09
CTNS-208ENST00000574218 RARBP10826 455 aa14.52□□□□□ -0.09
CTNS-208ENST00000574218 TLE2Q04725 743 aa14.52□□□□□ -0.09
CTNS-208ENST00000574218 RNF180Q86T96 592 aa14.52□□□□□ -0.09
CTNS-208ENST00000574218 MAGEB6Q8N7X4 407 aa14.52□□□□□ -0.09
CTNS-208ENST00000574218 MB21D1Q8N884 522 aa14.52□□□□□ -0.09
CTNS-208ENST00000574218 ZNF512BQ96KM6 892 aaPredicted RBP14.52□□□□□ -0.09
CTNS-208ENST00000574218 MROH8Q9H579 483 aa14.52□□□□□ -0.09
CTNS-208ENST00000574218 PARP14Q460N5 1801 aa14.52□□□□□ -0.09
CTNS-208ENST00000574218 PRUNE2Q8WUY3 3088 aa14.51□□□□□ -0.09
CTNS-208ENST00000574218 TRIM43BA6NCK2 446 aa14.51□□□□□ -0.09
CTNS-208ENST00000574218 ERCC3P19447 782 aa14.51□□□□□ -0.09
CTNS-208ENST00000574218 MAP3K12Q12852 859 aa14.51□□□□□ -0.09
CTNS-208ENST00000574218 C1orf53Q5VUE5 145 aa14.51□□□□□ -0.09
CTNS-208ENST00000574218 SAMD1Q6SPF0 538 aaPredicted RBP14.51□□□□□ -0.09
CTNS-208ENST00000574218 SH3RF1Q7Z6J0 888 aa14.51□□□□□ -0.09
CTNS-208ENST00000574218 TRIM43Q96BQ3 446 aaPredicted RBP14.51□□□□□ -0.09
CTNS-208ENST00000574218 XPNPEP3Q9NQH7 507 aa14.51□□□□□ -0.09
CTNS-208ENST00000574218 ZNF316A6NFI3 1004 aaPredicted RBP14.5□□□□□ -0.09
CTNS-208ENST00000574218 TNFRSF10AO00220 468 aa14.5□□□□□ -0.09
CTNS-208ENST00000574218 PQBP1O60828 265 aaKnown RBP14.5□□□□□ -0.09
CTNS-208ENST00000574218 SURF6O75683 361 aaKnown RBP14.5□□□□□ -0.09
CTNS-208ENST00000574218 FCER1AP12319 257 aa14.5□□□□□ -0.09
CTNS-208ENST00000574218 RARSP54136 660 aaKnown RBP14.5□□□□□ -0.09
CTNS-208ENST00000574218 FPGSQ05932 587 aa14.5□□□□□ -0.09
CTNS-208ENST00000574218 SEPT2Q15019 361 aa14.5□□□□□ -0.09
CTNS-208ENST00000574218 FAM47AQ5JRC9 791 aa14.5□□□□□ -0.09
CTNS-208ENST00000574218 PRAMEF19Q5SWL8 479 aa14.5□□□□□ -0.09
CTNS-208ENST00000574218 TMED8Q6PL24 325 aaPredicted RBP14.5□□□□□ -0.09
CTNS-208ENST00000574218 TRMT2AQ8IZ69 625 aaKnown RBP14.5□□□□□ -0.09
CTNS-208ENST00000574218 ABRAQ8N0Z2 381 aa14.5□□□□□ -0.09
CTNS-208ENST00000574218 PHF24Q9UPV7 400 aa14.5□□□□□ -0.09
CTNS-208ENST00000574218 SPTBN5Q9NRC6 3674 aaKnown RBP14.5□□□□□ -0.09
CTNS-208ENST00000574218 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.49□□□□□ -0.09
CTNS-208ENST00000574218 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.49□□□□□ -0.09
CTNS-208ENST00000574218 COBLO75128 1261 aa14.49□□□□□ -0.09
CTNS-208ENST00000574218 FLOT1O75955 427 aa14.49□□□□□ -0.09
CTNS-208ENST00000574218 COL9A1P20849 921 aa14.49□□□□□ -0.09
CTNS-208ENST00000574218 SHMT1P34896 483 aa14.49□□□□□ -0.09
CTNS-208ENST00000574218 CCDC174Q6PII3 467 aa14.49□□□□□ -0.09
CTNS-208ENST00000574218 IL27Q8NEV9 243 aa14.49□□□□□ -0.09
CTNS-208ENST00000574218 FRAT1Q92837 279 aaPredicted RBP14.49□□□□□ -0.09
CTNS-208ENST00000574218 MAML3Q96JK9 1138 aa14.49□□□□□ -0.09
CTNS-208ENST00000574218 GAS2L1Q99501 681 aaPredicted RBP14.49□□□□□ -0.09
CTNS-208ENST00000574218 SH2D4AQ9H788 454 aa14.49□□□□□ -0.09
CTNS-208ENST00000574218 ARHGEF10LQ9HCE6 1279 aa14.49□□□□□ -0.09
CTNS-208ENST00000574218 TMEM39AQ9NV64 488 aa14.49□□□□□ -0.09
CTNS-208ENST00000574218 NRBP1Q9UHY1 535 aa14.49□□□□□ -0.09
CTNS-208ENST00000574218 CDH23Q9H251 3354 aa14.48□□□□□ -0.09
CTNS-208ENST00000574218 SLC25A27O95847 323 aa14.48□□□□□ -0.09
CTNS-208ENST00000574218 IGHA2P01877 340 aa14.48□□□□□ -0.09
CTNS-208ENST00000574218 DNAJB2P25686 324 aa14.48□□□□□ -0.09
CTNS-208ENST00000574218 MMP19Q99542 508 aa14.48□□□□□ -0.09
CTNS-208ENST00000574218 CRNKL1Q9BZJ0 848 aaKnown RBP14.48□□□□□ -0.09
CTNS-208ENST00000574218 BAZ2AQ9UIF9 1905 aaKnown RBP14.47□□□□□ -0.09
CTNS-208ENST00000574218 MAGEB6P1A0A0J9YX57 407 aa14.47□□□□□ -0.09
CTNS-208ENST00000574218 DCDC2CA8MYV0 355 aa14.47□□□□□ -0.09
CTNS-208ENST00000574218 KIAA0355O15063 1070 aa14.47□□□□□ -0.09
CTNS-208ENST00000574218 DSG3P32926 999 aa14.47□□□□□ -0.09
CTNS-208ENST00000574218 PLCD1P51178 756 aa14.47□□□□□ -0.09
CTNS-208ENST00000574218 GRIN2CQ14957 1233 aa14.47□□□□□ -0.09
CTNS-208ENST00000574218 CCDC129Q6ZRS4 1044 aa14.47□□□□□ -0.09
CTNS-208ENST00000574218 TMEM179Q6ZVK1 233 aa14.47□□□□□ -0.09
CTNS-208ENST00000574218 NUP133Q8WUM0 1156 aa14.47□□□□□ -0.09
CTNS-208ENST00000574218 TIFAQ96CG3 184 aa14.47□□□□□ -0.09
CTNS-208ENST00000574218 CCDC8Q9H0W5 538 aaPredicted RBP14.47□□□□□ -0.09
CTNS-208ENST00000574218 ZNF576Q9H609 170 aa14.47□□□□□ -0.09
CTNS-208ENST00000574218 MCM9Q9NXL9 1143 aa14.47□□□□□ -0.09
CTNS-208ENST00000574218 DBNLQ9UJU6 430 aaKnown RBP14.47□□□□□ -0.09
CTNS-208ENST00000574218 A0A1W2PQ45 241 aaPredicted RBP14.46□□□□□ -0.09
CTNS-208ENST00000574218 A0A1W2PQY0 241 aa14.46□□□□□ -0.09
CTNS-208ENST00000574218 PGK1P00558 417 aa14.46□□□□□ -0.09
CTNS-208ENST00000574218 TRIM27P14373 513 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms