RNA–Protein interactions for RNA: ENST00000574049.1

RPA1-207, Transcript of replication protein A1, humanhuman

TSL 5

Gene RPA1, Length 3,849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-207ENST00000574049 FAM200AQ8TCP9 573 aa8.58□□□□□ -1.04
RPA1-207ENST00000574049 TBC1D22AQ8WUA7 517 aa8.58□□□□□ -1.04
RPA1-207ENST00000574049 TEKT1Q969V4 418 aa8.58□□□□□ -1.04
RPA1-207ENST00000574049 TDRD3Q9H7E2 651 aaKnown RBP8.58□□□□□ -1.04
RPA1-207ENST00000574049 KAT14Q9H8E8 782 aa8.58□□□□□ -1.04
RPA1-207ENST00000574049 ZSWIM5Q9P217 1185 aa8.58□□□□□ -1.04
RPA1-207ENST00000574049 V9GY48 417 aaPredicted RBP8.58□□□□□ -1.04
RPA1-207ENST00000574049 NUP98P52948 1817 aa8.58□□□□□ -1.04
RPA1-207ENST00000574049 CCDC196A0A1B0GTZ2 297 aa8.58□□□□□ -1.04
RPA1-207ENST00000574049 NR1I2O75469 434 aa8.58□□□□□ -1.04
RPA1-207ENST00000574049 HOXA10P31260 410 aaPredicted RBP8.58□□□□□ -1.04
RPA1-207ENST00000574049 UBA7P41226 1012 aa8.58□□□□□ -1.04
RPA1-207ENST00000574049 TFAP4Q01664 338 aa8.58□□□□□ -1.04
RPA1-207ENST00000574049 MRPS27Q92552 414 aaKnown RBP8.58□□□□□ -1.04
RPA1-207ENST00000574049 UPF1Q92900 1129 aaKnown RBP eCLIP8.58□□□□□ -1.047e-10■□□□□ 9.4
RPA1-207ENST00000574049 KIF4BQ2VIQ3 1234 aa8.58□□□□□ -1.04
RPA1-207ENST00000574049 HS1BP3Q53T59 392 aa8.58□□□□□ -1.04
RPA1-207ENST00000574049 CT47A1Q5JQC4 288 aaPredicted RBP8.58□□□□□ -1.04
RPA1-207ENST00000574049 LEKR1Q6ZMV7 388 aa8.58□□□□□ -1.04
RPA1-207ENST00000574049 TTC6Q86TZ1 520 aa8.58□□□□□ -1.04
RPA1-207ENST00000574049 AIFM3Q96NN9 605 aa8.58□□□□□ -1.04
RPA1-207ENST00000574049 PPP1R9BQ96SB3 815 aa8.58□□□□□ -1.04
RPA1-207ENST00000574049 MTFR1LQ9H019 292 aa8.58□□□□□ -1.04
RPA1-207ENST00000574049 SENP2Q9HC62 589 aa8.58□□□□□ -1.04
RPA1-207ENST00000574049 PUF60Q9UHX1 559 aaKnown RBP8.58□□□□□ -1.04
RPA1-207ENST00000574049 TAF1P21675 1872 aa8.57□□□□□ -1.04
RPA1-207ENST00000574049 MED23Q9ULK4 1368 aa8.57□□□□□ -1.04
RPA1-207ENST00000574049 USP17L3A6NCW0 530 aa8.57□□□□□ -1.04
RPA1-207ENST00000574049 USP17L4A6NCW7 530 aa8.57□□□□□ -1.04
RPA1-207ENST00000574049 UBASH3AP57075 661 aa8.57□□□□□ -1.04
RPA1-207ENST00000574049 CYB5R4Q7L1T6 521 aa8.57□□□□□ -1.04
RPA1-207ENST00000574049 USP17L1Q7RTZ2 530 aa8.57□□□□□ -1.04
RPA1-207ENST00000574049 KRT23Q9C075 422 aa8.57□□□□□ -1.04
RPA1-207ENST00000574049 SEC63Q9UGP8 760 aaKnown RBP8.57□□□□□ -1.04
RPA1-207ENST00000574049 NEDD4P46934 1319 aa8.57□□□□□ -1.04
RPA1-207ENST00000574049 EPB41L2O43491 1005 aaKnown RBP8.57□□□□□ -1.04
RPA1-207ENST00000574049 GPR162Q16538 588 aa8.57□□□□□ -1.04
RPA1-207ENST00000574049 DNAJC21Q5F1R6 531 aaKnown RBP8.57□□□□□ -1.04
RPA1-207ENST00000574049 WDR78Q5VTH9 848 aa8.57□□□□□ -1.04
RPA1-207ENST00000574049 CCDC125Q86Z20 511 aa8.57□□□□□ -1.04
RPA1-207ENST00000574049 NUP88Q99567 741 aaPredicted RBP8.57□□□□□ -1.04
RPA1-207ENST00000574049 FAM107BQ9H098 131 aa8.57□□□□□ -1.04
RPA1-207ENST00000574049 TAOK3Q9H2K8 898 aa8.57□□□□□ -1.04
RPA1-207ENST00000574049 DCP1AQ9NPI6 582 aaPredicted RBP8.57□□□□□ -1.04
RPA1-207ENST00000574049 IVNS1ABPQ9Y6Y0 642 aa8.57□□□□□ -1.04
RPA1-207ENST00000574049 VWA3AA6NCI4 1184 aa8.57□□□□□ -1.04
RPA1-207ENST00000574049 H0YHG0 523 aa8.57□□□□□ -1.04
RPA1-207ENST00000574049 SNW1Q13573 536 aaKnown RBP8.57□□□□□ -1.04
RPA1-207ENST00000574049 STX1AQ16623 288 aa8.57□□□□□ -1.04
RPA1-207ENST00000574049 TMC4Q7Z404 712 aa8.57□□□□□ -1.04
RPA1-207ENST00000574049 SLC16A10Q8TF71 515 aa8.57□□□□□ -1.04
RPA1-207ENST00000574049 LEO1Q8WVC0 666 aaPredicted RBP8.57□□□□□ -1.04
RPA1-207ENST00000574049 WASF1Q92558 559 aa8.57□□□□□ -1.04
RPA1-207ENST00000574049 INTS4Q96HW7 963 aaKnown RBP8.57□□□□□ -1.04
RPA1-207ENST00000574049 USP28Q96RU2 1077 aa8.57□□□□□ -1.04
RPA1-207ENST00000574049 CBX8Q9HC52 389 aa8.57□□□□□ -1.04
RPA1-207ENST00000574049 SPON1Q9HCB6 807 aa8.57□□□□□ -1.04
RPA1-207ENST00000574049 SETQ01105 290 aaPredicted RBP8.56□□□□□ -1.04
RPA1-207ENST00000574049 RASSF7Q02833 373 aa8.56□□□□□ -1.04
RPA1-207ENST00000574049 ARID5AQ03989 594 aa8.56□□□□□ -1.04
RPA1-207ENST00000574049 TOB2Q14106 344 aaPredicted RBP8.56□□□□□ -1.04
RPA1-207ENST00000574049 DLGAP5Q15398 846 aa8.56□□□□□ -1.04
RPA1-207ENST00000574049 TRMT44Q8IYL2 757 aaKnown RBP8.56□□□□□ -1.04
RPA1-207ENST00000574049 SMARCE1Q969G3 411 aa8.56□□□□□ -1.04
RPA1-207ENST00000574049 TM6SF1Q9BZW5 370 aa8.56□□□□□ -1.04
RPA1-207ENST00000574049 ANGEL1Q9UNK9 670 aaKnown RBP8.56□□□□□ -1.04
RPA1-207ENST00000574049 BAZ2BQ9UIF8 2168 aaKnown RBP8.56□□□□□ -1.04
RPA1-207ENST00000574049 SMTNL1A8MU46 457 aa8.56□□□□□ -1.04
RPA1-207ENST00000574049 TERF1P54274 439 aa8.56□□□□□ -1.04
RPA1-207ENST00000574049 RAD51AP2Q09MP3 1159 aa8.56□□□□□ -1.04
RPA1-207ENST00000574049 ZYXQ15942 572 aaKnown RBP8.56□□□□□ -1.04
RPA1-207ENST00000574049 TCERG1LQ5VWI1 586 aa8.56□□□□□ -1.04
RPA1-207ENST00000574049 PODNQ7Z5L7 613 aa8.56□□□□□ -1.04
RPA1-207ENST00000574049 CLEC10AQ8IUN9 316 aa8.56□□□□□ -1.04
RPA1-207ENST00000574049 SUPT20HQ8NEM7 779 aa8.56□□□□□ -1.04
RPA1-207ENST00000574049 NLGN2Q8NFZ4 835 aa8.56□□□□□ -1.04
RPA1-207ENST00000574049 ZNF512BQ96KM6 892 aaPredicted RBP8.56□□□□□ -1.04
RPA1-207ENST00000574049 ZSCAN16Q9H4T2 348 aaPredicted RBP8.56□□□□□ -1.04
RPA1-207ENST00000574049 RTL9Q8NET4 1388 aa8.56□□□□□ -1.04
RPA1-207ENST00000574049 TCRBV5S4A2TA0A5A2 114 aa8.56□□□□□ -1.04
RPA1-207ENST00000574049 ZNF500O60304 480 aaPredicted RBP8.56□□□□□ -1.04
RPA1-207ENST00000574049 HLA-DOAP06340 250 aa8.56□□□□□ -1.04
RPA1-207ENST00000574049 CRKP46108 304 aa8.56□□□□□ -1.04
RPA1-207ENST00000574049 GTF2A1P52655 376 aaPredicted RBP8.56□□□□□ -1.04
RPA1-207ENST00000574049 SCRN1Q12765 414 aa8.56□□□□□ -1.04
RPA1-207ENST00000574049 CCDC178Q5BJE1 867 aa8.56□□□□□ -1.04
RPA1-207ENST00000574049 TMCO3Q6UWJ1 677 aa8.56□□□□□ -1.04
RPA1-207ENST00000574049 MIGA2Q7L4E1 593 aa8.56□□□□□ -1.04
RPA1-207ENST00000574049 PLCD4Q9BRC7 762 aa8.56□□□□□ -1.04
RPA1-207ENST00000574049 ZNHIT6Q9NWK9 470 aaKnown RBP8.56□□□□□ -1.04
RPA1-207ENST00000574049 VPS54Q9P1Q0 977 aa8.56□□□□□ -1.04
RPA1-207ENST00000574049 SERPINA10Q9UK55 444 aa8.56□□□□□ -1.04
RPA1-207ENST00000574049 HDAC9Q9UKV0 1011 aa8.56□□□□□ -1.04
RPA1-207ENST00000574049 MTMR6Q9Y217 621 aa8.56□□□□□ -1.04
RPA1-207ENST00000574049 N4BP3O15049 544 aa8.55□□□□□ -1.04
RPA1-207ENST00000574049 GOLGA8HP0CJ92 632 aa8.55□□□□□ -1.04
RPA1-207ENST00000574049 LMAN1P49257 510 aa8.55□□□□□ -1.04
RPA1-207ENST00000574049 STIM1Q13586 685 aa8.55□□□□□ -1.04
RPA1-207ENST00000574049 ELF2Q15723 593 aa8.55□□□□□ -1.04
RPA1-207ENST00000574049 STYK1Q6J9G0 422 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms