RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 RCSD1Q6JBY9 416 aa18.3■□□□□ 0.52
USP43-204ENST00000573955 C11orf57Q6ZUT1 292 aaPredicted RBP18.3■□□□□ 0.52
USP43-204ENST00000573955 SRBD1Q8N5C6 995 aaKnown RBP18.3■□□□□ 0.52
USP43-204ENST00000573955 IL17RBQ9NRM6 502 aa18.3■□□□□ 0.52
USP43-204ENST00000573955 STK32BQ9NY57 414 aa18.3■□□□□ 0.52
USP43-204ENST00000573955 TOB1P50616 345 aaPredicted RBP18.29■□□□□ 0.52
USP43-204ENST00000573955 PPP4CP60510 307 aa18.29■□□□□ 0.52
USP43-204ENST00000573955 DPP8Q6V1X1 898 aaPredicted RBP18.29■□□□□ 0.52
USP43-204ENST00000573955 ZC3H12CQ9C0D7 883 aaKnown RBP18.29■□□□□ 0.52
USP43-204ENST00000573955 DDAH1O94760 285 aa18.29■□□□□ 0.52
USP43-204ENST00000573955 TSPY3P0CV98 308 aa18.29■□□□□ 0.52
USP43-204ENST00000573955 TSPY8P0CW00 308 aa18.29■□□□□ 0.52
USP43-204ENST00000573955 NPR1P16066 1061 aa18.29■□□□□ 0.52
USP43-204ENST00000573955 TMTC3Q6ZXV5 915 aa18.29■□□□□ 0.52
USP43-204ENST00000573955 KAT14Q9H8E8 782 aa18.29■□□□□ 0.52
USP43-204ENST00000573955 SPTLC3Q9NUV7 552 aa18.29■□□□□ 0.52
USP43-204ENST00000573955 MYH6P13533 1939 aa18.28■□□□□ 0.52
USP43-204ENST00000573955 PICALMQ13492 652 aa18.28■□□□□ 0.52
USP43-204ENST00000573955 KRT222Q8N1A0 295 aa18.28■□□□□ 0.52
USP43-204ENST00000573955 CABP5Q9NP86 173 aa18.28■□□□□ 0.52
USP43-204ENST00000573955 RBM28Q9NW13 759 aaKnown RBP18.28■□□□□ 0.52
USP43-204ENST00000573955 GPR75-ASB3A0A0A6YYF3 556 aa18.28■□□□□ 0.52
USP43-204ENST00000573955 ZNF202O95125 648 aa18.28■□□□□ 0.52
USP43-204ENST00000573955 CALM1P0DP23 149 aa18.28■□□□□ 0.52
USP43-204ENST00000573955 CALM2P0DP24 149 aa18.28■□□□□ 0.52
USP43-204ENST00000573955 CALM3P0DP25 149 aa18.28■□□□□ 0.52
USP43-204ENST00000573955 SF3B2Q13435 895 aaKnown RBP18.28■□□□□ 0.52
USP43-204ENST00000573955 ZNF444Q8N0Y2 327 aaPredicted RBP18.28■□□□□ 0.52
USP43-204ENST00000573955 SPC24Q8NBT2 197 aa18.28■□□□□ 0.52
USP43-204ENST00000573955 STX8Q9UNK0 236 aa18.28■□□□□ 0.52
USP43-204ENST00000573955 PCDHB6Q9Y5E3 794 aa18.28■□□□□ 0.52
USP43-204ENST00000573955 G3V3G9 751 aa18.27■□□□□ 0.52
USP43-204ENST00000573955 CTAGE5O15320 804 aa18.27■□□□□ 0.52
USP43-204ENST00000573955 VEGFAP15692 232 aaPredicted RBP18.27■□□□□ 0.52
USP43-204ENST00000573955 SCNN1DP51172 638 aa18.27■□□□□ 0.52
USP43-204ENST00000573955 GRIPAP1Q4V328 841 aa18.27■□□□□ 0.52
USP43-204ENST00000573955 DCAF8Q5TAQ9 597 aa18.27■□□□□ 0.52
USP43-204ENST00000573955 TMED8Q6PL24 325 aaPredicted RBP18.27■□□□□ 0.52
USP43-204ENST00000573955 SHC4Q6S5L8 630 aa18.27■□□□□ 0.52
USP43-204ENST00000573955 C2CD5Q86YS7 1000 aa18.27■□□□□ 0.52
USP43-204ENST00000573955 CREBRFQ8IUR6 639 aa18.27■□□□□ 0.52
USP43-204ENST00000573955 FLT1P17948 1338 aa18.27■□□□□ 0.52
USP43-204ENST00000573955 BIN1O00499 593 aa18.27■□□□□ 0.51
USP43-204ENST00000573955 PRPF3O43395 683 aaKnown RBP18.27■□□□□ 0.51
USP43-204ENST00000573955 PDE6BP35913 854 aa18.27■□□□□ 0.51
USP43-204ENST00000573955 NOP2P46087 812 aaKnown RBP18.27■□□□□ 0.51
USP43-204ENST00000573955 EARS2Q5JPH6 523 aaKnown RBP18.27■□□□□ 0.51
USP43-204ENST00000573955 EP400NLQ6ZTU2 488 aa18.27■□□□□ 0.51
USP43-204ENST00000573955 RASGRP2Q7LDG7 609 aa18.27■□□□□ 0.51
USP43-204ENST00000573955 FOXP1Q9H334 677 aaPredicted RBP18.27■□□□□ 0.51
USP43-204ENST00000573955 KCNQ5Q9NR82 932 aa18.27■□□□□ 0.51
USP43-204ENST00000573955 CNTNAP5Q8WYK1 1306 aa18.27■□□□□ 0.51
USP43-204ENST00000573955 CMA1P23946 247 aa18.26■□□□□ 0.51
USP43-204ENST00000573955 RHBDL3P58872 404 aa18.26■□□□□ 0.51
USP43-204ENST00000573955 GRIN1Q05586 938 aa18.26■□□□□ 0.51
USP43-204ENST00000573955 RAD51AP2Q09MP3 1159 aa18.26■□□□□ 0.51
USP43-204ENST00000573955 PPP2R5BQ15173 497 aa18.26■□□□□ 0.51
USP43-204ENST00000573955 NOM1Q5C9Z4 860 aaKnown RBP18.26■□□□□ 0.51
USP43-204ENST00000573955 CERS5Q8N5B7 392 aa18.26■□□□□ 0.51
USP43-204ENST00000573955 PNMA1Q8ND90 353 aa18.26■□□□□ 0.51
USP43-204ENST00000573955 TBC1D22AQ8WUA7 517 aa18.26■□□□□ 0.51
USP43-204ENST00000573955 NCAPGQ9BPX3 1015 aa18.26■□□□□ 0.51
USP43-204ENST00000573955 XBP1P17861 261 aa18.26■□□□□ 0.51
USP43-204ENST00000573955 STAG2Q8N3U4 1231 aa18.26■□□□□ 0.51
USP43-204ENST00000573955 JMYQ8N9B5 988 aa18.26■□□□□ 0.51
USP43-204ENST00000573955 DBNDD1Q9H9R9 158 aa18.26■□□□□ 0.51
USP43-204ENST00000573955 DAGLAQ9Y4D2 1042 aa18.26■□□□□ 0.51
USP43-204ENST00000573955 NAV1Q8NEY1 1877 aa18.25■□□□□ 0.51
USP43-204ENST00000573955 STX1AQ16623 288 aa18.25■□□□□ 0.51
USP43-204ENST00000573955 ISM2Q6H9L7 571 aa18.25■□□□□ 0.51
USP43-204ENST00000573955 TMC4Q7Z404 712 aa18.25■□□□□ 0.51
USP43-204ENST00000573955 C17orf53Q8N3J3 647 aaPredicted RBP18.25■□□□□ 0.51
USP43-204ENST00000573955 COA1Q9GZY4 146 aa18.25■□□□□ 0.51
USP43-204ENST00000573955 PPP6R2O75170 966 aa18.25■□□□□ 0.51
USP43-204ENST00000573955 COL11A2P13942 1736 aaPredicted RBP18.25■□□□□ 0.51
USP43-204ENST00000573955 RASA1P20936 1047 aa18.25■□□□□ 0.51
USP43-204ENST00000573955 ALDH1B1P30837 517 aa18.25■□□□□ 0.51
USP43-204ENST00000573955 SYKP43405 635 aa18.25■□□□□ 0.51
USP43-204ENST00000573955 MASTLQ96GX5 879 aa18.25■□□□□ 0.51
USP43-204ENST00000573955 TMX4Q9H1E5 349 aaPredicted RBP18.25■□□□□ 0.51
USP43-204ENST00000573955 RASSF4Q9H2L5 321 aa18.25■□□□□ 0.51
USP43-204ENST00000573955 TTF2Q9UNY4 1162 aaKnown RBP18.25■□□□□ 0.51
USP43-204ENST00000573955 DLEC1Q9Y238 1755 aa18.24■□□□□ 0.51
USP43-204ENST00000573955 ZBTB7AO95365 584 aa18.24■□□□□ 0.51
USP43-204ENST00000573955 HNRNPH2P55795 449 aaKnown RBP18.24■□□□□ 0.51
USP43-204ENST00000573955 NCBP1Q09161 790 aaKnown RBP18.24■□□□□ 0.51
USP43-204ENST00000573955 PHF20Q9BVI0 1012 aa18.24■□□□□ 0.51
USP43-204ENST00000573955 KRT2P35908 639 aa18.24■□□□□ 0.51
USP43-204ENST00000573955 CDK8P49336 464 aa18.24■□□□□ 0.51
USP43-204ENST00000573955 SYCP1Q15431 976 aa18.24■□□□□ 0.51
USP43-204ENST00000573955 FLAD1Q8NFF5 587 aa18.24■□□□□ 0.51
USP43-204ENST00000573955 LRRC37AA6NMS7 1700 aa18.24■□□□□ 0.51
USP43-204ENST00000573955 LTBP1Q14766 1721 aa18.24■□□□□ 0.51
USP43-204ENST00000573955 GOLGA8HP0CJ92 632 aa18.23■□□□□ 0.51
USP43-204ENST00000573955 BAG6P46379 1132 aa18.23■□□□□ 0.51
USP43-204ENST00000573955 RILPL1Q5EBL4 403 aa18.23■□□□□ 0.51
USP43-204ENST00000573955 SLF2Q8IX21 1173 aa18.23■□□□□ 0.51
USP43-204ENST00000573955 GPKOWQ92917 476 aaPredicted RBP eCLIP18.23■□□□□ 0.51
USP43-204ENST00000573955 TTC12Q9H892 705 aaPredicted RBP18.23■□□□□ 0.51
USP43-204ENST00000573955 FAM205AQ6ZU69 1335 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms