RNA–Protein interactions for RNA: ENST00000573694.5

NDE1-208, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 411 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-208ENST00000573694 NFIAQ12857 509 aa11.23□□□□□ -0.61
NDE1-208ENST00000573694 TRDNQ13061 729 aa11.23□□□□□ -0.61
NDE1-208ENST00000573694 PABPC4Q13310 644 aaKnown RBP eCLIP11.23□□□□□ -0.61
NDE1-208ENST00000573694 SLC4A8Q2Y0W8 1093 aa11.23□□□□□ -0.61
NDE1-208ENST00000573694 CTR9Q6PD62 1173 aa11.23□□□□□ -0.61
NDE1-208ENST00000573694 C17orf99Q6UX52 265 aa11.23□□□□□ -0.61
NDE1-208ENST00000573694 PROCA1Q8NCQ7 364 aaPredicted RBP11.23□□□□□ -0.61
NDE1-208ENST00000573694 ZKSCAN4Q969J2 545 aaPredicted RBP11.23□□□□□ -0.61
NDE1-208ENST00000573694 SENP2Q9HC62 589 aa11.23□□□□□ -0.61
NDE1-208ENST00000573694 NCOA5Q9HCD5 579 aaKnown RBP11.23□□□□□ -0.61
NDE1-208ENST00000573694 ANAPC4Q9UJX5 808 aa11.23□□□□□ -0.61
NDE1-208ENST00000573694 TNRC18O15417 2968 aaPredicted RBP11.23□□□□□ -0.61
NDE1-208ENST00000573694 A0A0G2JLL6 359 aaPredicted RBP11.22□□□□□ -0.61
NDE1-208ENST00000573694 GOLGA8BA8MQT2 603 aa11.22□□□□□ -0.61
NDE1-208ENST00000573694 USP17L12C9JPN9 530 aa11.22□□□□□ -0.61
NDE1-208ENST00000573694 USP17L21D6R901 530 aa11.22□□□□□ -0.61
NDE1-208ENST00000573694 BAG4O95429 457 aaKnown RBP11.22□□□□□ -0.61
NDE1-208ENST00000573694 CTDNEP1O95476 244 aa11.22□□□□□ -0.61
NDE1-208ENST00000573694 PTPRAP18433 802 aa11.22□□□□□ -0.61
NDE1-208ENST00000573694 PDIA3P30101 505 aaKnown RBP11.22□□□□□ -0.61
NDE1-208ENST00000573694 CACNB3P54284 484 aa11.22□□□□□ -0.61
NDE1-208ENST00000573694 LACTBP83111 547 aaPredicted RBP11.22□□□□□ -0.61
NDE1-208ENST00000573694 GIMAP6Q6P9H5 292 aa11.22□□□□□ -0.61
NDE1-208ENST00000573694 MFSD6Q6ZSS7 791 aa11.22□□□□□ -0.61
NDE1-208ENST00000573694 MIGA2Q7L4E1 593 aa11.22□□□□□ -0.61
NDE1-208ENST00000573694 PRRT2Q7Z6L0 340 aaPredicted RBP11.22□□□□□ -0.61
NDE1-208ENST00000573694 ZSCAN29Q8IWY8 852 aaPredicted RBP11.22□□□□□ -0.61
NDE1-208ENST00000573694 FAM43AQ8N2R8 423 aa11.22□□□□□ -0.61
NDE1-208ENST00000573694 FBXL16Q8N461 479 aa11.22□□□□□ -0.61
NDE1-208ENST00000573694 GBP4Q96PP9 640 aa11.22□□□□□ -0.61
NDE1-208ENST00000573694 R3HDMLQ9H3Y0 253 aa11.22□□□□□ -0.61
NDE1-208ENST00000573694 TOMM22Q9NS69 142 aa11.22□□□□□ -0.61
NDE1-208ENST00000573694 PNMA3Q9UL41 463 aa11.22□□□□□ -0.61
NDE1-208ENST00000573694 FZD1Q9UP38 647 aa11.22□□□□□ -0.61
NDE1-208ENST00000573694 AFG3L2Q9Y4W6 797 aa11.22□□□□□ -0.61
NDE1-208ENST00000573694 ASNSP08243 561 aa11.21□□□□□ -0.61
NDE1-208ENST00000573694 SYT1P21579 422 aa11.21□□□□□ -0.61
NDE1-208ENST00000573694 INPP5BP32019 993 aa11.21□□□□□ -0.61
NDE1-208ENST00000573694 EVCP57679 992 aa11.21□□□□□ -0.61
NDE1-208ENST00000573694 TCP10Q12799 353 aa11.21□□□□□ -0.61
NDE1-208ENST00000573694 CLEC17AQ6ZS10 378 aa11.21□□□□□ -0.61
NDE1-208ENST00000573694 CDAN1Q8IWY9 1227 aa11.21□□□□□ -0.61
NDE1-208ENST00000573694 NSUN7Q8NE18 718 aaKnown RBP11.21□□□□□ -0.61
NDE1-208ENST00000573694 ZNF274Q96GC6 653 aaPredicted RBP11.21□□□□□ -0.61
NDE1-208ENST00000573694 ZKSCAN3Q9BRR0 538 aa11.21□□□□□ -0.61
NDE1-208ENST00000573694 WDR18Q9BV38 432 aa11.21□□□□□ -0.61
NDE1-208ENST00000573694 TMEM106CQ9BVX2 250 aa11.21□□□□□ -0.61
NDE1-208ENST00000573694 KRT23Q9C075 422 aa11.21□□□□□ -0.61
NDE1-208ENST00000573694 CNNM2Q9H8M5 875 aa11.21□□□□□ -0.61
NDE1-208ENST00000573694 LY9Q9HBG7 655 aa11.21□□□□□ -0.61
NDE1-208ENST00000573694 AS3MTQ9HBK9 375 aa11.21□□□□□ -0.61
NDE1-208ENST00000573694 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.21□□□□□ -0.61
NDE1-208ENST00000573694 ROBO3Q96MS0 1386 aa11.2□□□□□ -0.62
NDE1-208ENST00000573694 PTPDC1A2A3K4 754 aa11.2□□□□□ -0.62
NDE1-208ENST00000573694 DDX11L8A8MPP1 907 aa11.2□□□□□ -0.62
NDE1-208ENST00000573694 C19orf81C9J6K1 198 aa11.2□□□□□ -0.62
NDE1-208ENST00000573694 PDHXO00330 501 aa11.2□□□□□ -0.62
NDE1-208ENST00000573694 STX6O43752 255 aa11.2□□□□□ -0.62
NDE1-208ENST00000573694 PPFIA3O75145 1194 aa11.2□□□□□ -0.62
NDE1-208ENST00000573694 PRDM1O75626 825 aa11.2□□□□□ -0.62
NDE1-208ENST00000573694 USP5P45974 858 aa11.2□□□□□ -0.62
NDE1-208ENST00000573694 GCLCP48506 637 aaPredicted RBP11.2□□□□□ -0.62
NDE1-208ENST00000573694 FOSBP53539 338 aa11.2□□□□□ -0.62
NDE1-208ENST00000573694 SBK1Q52WX2 424 aa11.2□□□□□ -0.62
NDE1-208ENST00000573694 TMEM67Q5HYA8 995 aa11.2□□□□□ -0.62
NDE1-208ENST00000573694 MAPKAPK5Q8IW41 473 aa11.2□□□□□ -0.62
NDE1-208ENST00000573694 TEX11Q8IYF3 940 aa11.2□□□□□ -0.62
NDE1-208ENST00000573694 SMARCC2Q8TAQ2 1214 aa11.2□□□□□ -0.62
NDE1-208ENST00000573694 IGDCC4Q8TDY8 1250 aa11.2□□□□□ -0.62
NDE1-208ENST00000573694 GTF3C2Q8WUA4 911 aaPredicted RBP11.2□□□□□ -0.62
NDE1-208ENST00000573694 TGFBRAP1Q8WUH2 860 aa11.2□□□□□ -0.62
NDE1-208ENST00000573694 DDX11Q96FC9 970 aa11.2□□□□□ -0.62
NDE1-208ENST00000573694 TMEM87BQ96K49 555 aa11.2□□□□□ -0.62
NDE1-208ENST00000573694 RNF41Q9H4P4 317 aaPredicted RBP11.2□□□□□ -0.62
NDE1-208ENST00000573694 ATP8A2Q9NTI2 1148 aa11.2□□□□□ -0.62
NDE1-208ENST00000573694 ZSWIM5Q9P217 1185 aa11.2□□□□□ -0.62
NDE1-208ENST00000573694 PCDH10Q9P2E7 1040 aa11.2□□□□□ -0.62
NDE1-208ENST00000573694 ARPP21Q9UBL0 812 aaPredicted RBP11.2□□□□□ -0.62
NDE1-208ENST00000573694 SAP30BPQ9UHR5 308 aaKnown RBP11.2□□□□□ -0.62
NDE1-208ENST00000573694 MTMR6Q9Y217 621 aa11.2□□□□□ -0.62
NDE1-208ENST00000573694 ZHX2Q9Y6X8 837 aa11.2□□□□□ -0.62
NDE1-208ENST00000573694 OTOFQ9HC10 1997 aa11.19□□□□□ -0.62
NDE1-208ENST00000573694 FLT1P17948 1338 aa11.19□□□□□ -0.62
NDE1-208ENST00000573694 VPS37CA5D8V6 355 aaPredicted RBP11.19□□□□□ -0.62
NDE1-208ENST00000573694 IFIT3O14879 490 aaKnown RBP11.19□□□□□ -0.62
NDE1-208ENST00000573694 ZSCAN22P10073 491 aaPredicted RBP11.19□□□□□ -0.62
NDE1-208ENST00000573694 RXRAP19793 462 aa11.19□□□□□ -0.62
NDE1-208ENST00000573694 CAP2P40123 477 aa11.19□□□□□ -0.62
NDE1-208ENST00000573694 MOGSQ13724 837 aa11.19□□□□□ -0.62
NDE1-208ENST00000573694 SH3D19Q5HYK7 790 aa11.19□□□□□ -0.62
NDE1-208ENST00000573694 PRPF38BQ5VTL8 546 aaKnown RBP11.19□□□□□ -0.62
NDE1-208ENST00000573694 MCTP1Q6DN14 999 aa11.19□□□□□ -0.62
NDE1-208ENST00000573694 APOA5Q6Q788 366 aa11.19□□□□□ -0.62
NDE1-208ENST00000573694 CD99L2Q8TCZ2 262 aa11.19□□□□□ -0.62
NDE1-208ENST00000573694 MYL10Q9BUA6 226 aa11.19□□□□□ -0.62
NDE1-208ENST00000573694 EHD4Q9H223 541 aa11.19□□□□□ -0.62
NDE1-208ENST00000573694 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.19□□□□□ -0.62
NDE1-208ENST00000573694 MCM9Q9NXL9 1143 aa11.19□□□□□ -0.62
NDE1-208ENST00000573694 AGTPBP1Q9UPW5 1226 aa11.19□□□□□ -0.62
NDE1-208ENST00000573694 ADGRA2Q96PE1 1338 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms