RNA–Protein interactions for RNA: ENST00000573325.1

ABR-220, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 471 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-220ENST00000573325 RAB3GAP1Q15042 981 aa13.33□□□□□ -0.28
ABR-220ENST00000573325 RPAP2Q8IXW5 612 aaPredicted RBP13.33□□□□□ -0.28
ABR-220ENST00000573325 TMX2Q9Y320 296 aa13.33□□□□□ -0.28
ABR-220ENST00000573325 CYP2D7A0A087X1C5 515 aa13.32□□□□□ -0.28
ABR-220ENST00000573325 POTEB2H3BUK9 544 aa13.32□□□□□ -0.28
ABR-220ENST00000573325 GOLIM4O00461 696 aa13.32□□□□□ -0.28
ABR-220ENST00000573325 AKR1B1P15121 316 aa13.32□□□□□ -0.28
ABR-220ENST00000573325 C12orf60Q5U649 245 aa13.32□□□□□ -0.28
ABR-220ENST00000573325 OLFML2BQ68BL8 750 aa13.32□□□□□ -0.28
ABR-220ENST00000573325 REPS2Q8NFH8 660 aa13.32□□□□□ -0.28
ABR-220ENST00000573325 KIF1BPQ96EK5 621 aa13.32□□□□□ -0.28
ABR-220ENST00000573325 HAUS7Q99871 368 aa13.32□□□□□ -0.28
ABR-220ENST00000573325 ARMT1Q9H993 441 aa13.32□□□□□ -0.28
ABR-220ENST00000573325 MTMR10Q9NXD2 777 aa13.32□□□□□ -0.28
ABR-220ENST00000573325 DDX20Q9UHI6 824 aaKnown RBP13.32□□□□□ -0.28
ABR-220ENST00000573325 PARP14Q460N5 1801 aa13.32□□□□□ -0.28
ABR-220ENST00000573325 MUC3AQ02505 3323 aa13.31□□□□□ -0.28
ABR-220ENST00000573325 TTC28Q96AY4 2481 aa13.31□□□□□ -0.28
ABR-220ENST00000573325 DSG3P32926 999 aa13.31□□□□□ -0.28
ABR-220ENST00000573325 PDE3AQ14432 1141 aa13.31□□□□□ -0.28
ABR-220ENST00000573325 COG2Q14746 738 aa13.31□□□□□ -0.28
ABR-220ENST00000573325 SNX17Q15036 470 aa13.31□□□□□ -0.28
ABR-220ENST00000573325 TTF1Q15361 905 aaPredicted RBP13.31□□□□□ -0.28
ABR-220ENST00000573325 Q7L0L9 218 aa13.31□□□□□ -0.28
ABR-220ENST00000573325 TDHQ8IZJ6 230 aa13.31□□□□□ -0.28
ABR-220ENST00000573325 SHCBP1Q8NEM2 672 aa13.31□□□□□ -0.28
ABR-220ENST00000573325 LPAR1Q92633 364 aa13.31□□□□□ -0.28
ABR-220ENST00000573325 CRNKL1Q9BZJ0 848 aaKnown RBP13.31□□□□□ -0.28
ABR-220ENST00000573325 SPATC1LQ9H0A9 340 aa13.31□□□□□ -0.28
ABR-220ENST00000573325 MCM9Q9NXL9 1143 aa13.31□□□□□ -0.28
ABR-220ENST00000573325 NAV1Q8NEY1 1877 aa13.31□□□□□ -0.28
ABR-220ENST00000573325 ERCC3P19447 782 aa13.3□□□□□ -0.28
ABR-220ENST00000573325 ADORA2AP29274 412 aa13.3□□□□□ -0.28
ABR-220ENST00000573325 HSP90AB4PQ58FF6 505 aa13.3□□□□□ -0.28
ABR-220ENST00000573325 C20orf194Q5TEA3 1177 aa13.3□□□□□ -0.28
ABR-220ENST00000573325 TMEM179Q6ZVK1 233 aa13.3□□□□□ -0.28
ABR-220ENST00000573325 C16orf86Q6ZW13 317 aa13.3□□□□□ -0.28
ABR-220ENST00000573325 FEZ1Q99689 392 aa13.3□□□□□ -0.28
ABR-220ENST00000573325 TRIM34Q9BYJ4 488 aa13.3□□□□□ -0.28
ABR-220ENST00000573325 COG6Q9Y2V7 657 aa13.3□□□□□ -0.28
ABR-220ENST00000573325 GREB1LQ9C091 1923 aaPredicted RBP13.3□□□□□ -0.28
ABR-220ENST00000573325 MBD4O95243 580 aa13.29□□□□□ -0.28
ABR-220ENST00000573325 POLR3DP05423 398 aaPredicted RBP13.29□□□□□ -0.28
ABR-220ENST00000573325 CDK8P49336 464 aa13.29□□□□□ -0.28
ABR-220ENST00000573325 CCNA1P78396 465 aa13.29□□□□□ -0.28
ABR-220ENST00000573325 TMEM132BQ14DG7 1078 aa13.29□□□□□ -0.28
ABR-220ENST00000573325 UBE3CQ15386 1083 aa13.29□□□□□ -0.28
ABR-220ENST00000573325 ABRAQ8N0Z2 381 aa13.29□□□□□ -0.28
ABR-220ENST00000573325 CLASRPQ8N2M8 674 aaKnown RBP13.29□□□□□ -0.28
ABR-220ENST00000573325 ATG4CQ96DT6 458 aa13.29□□□□□ -0.28
ABR-220ENST00000573325 PUS7LQ9H0K6 701 aaKnown RBP13.29□□□□□ -0.28
ABR-220ENST00000573325 BOLA2Q9H3K6 86 aa13.29□□□□□ -0.28
ABR-220ENST00000573325 VCPKMTQ9H867 229 aa13.29□□□□□ -0.28
ABR-220ENST00000573325 ATP8A2Q9NTI2 1148 aa13.29□□□□□ -0.28
ABR-220ENST00000573325 FBXO28Q9NVF7 368 aa13.29□□□□□ -0.28
ABR-220ENST00000573325 PAG1Q9NWQ8 432 aa13.29□□□□□ -0.28
ABR-220ENST00000573325 HOXC10Q9NYD6 342 aa13.29□□□□□ -0.28
ABR-220ENST00000573325 ZNF214Q9UL59 606 aaPredicted RBP13.29□□□□□ -0.28
ABR-220ENST00000573325 CHD7Q9P2D1 2997 aa13.28□□□□□ -0.28
ABR-220ENST00000573325 USP17L12C9JPN9 530 aa13.28□□□□□ -0.28
ABR-220ENST00000573325 USP17L21D6R901 530 aa13.28□□□□□ -0.28
ABR-220ENST00000573325 DNM1LO00429 736 aa13.28□□□□□ -0.28
ABR-220ENST00000573325 STRNO43815 780 aa13.28□□□□□ -0.28
ABR-220ENST00000573325 RAB11FIP3O75154 756 aa13.28□□□□□ -0.28
ABR-220ENST00000573325 MFSD14CQ5VZR4 134 aa13.28□□□□□ -0.28
ABR-220ENST00000573325 CTR9Q6PD62 1173 aa13.28□□□□□ -0.28
ABR-220ENST00000573325 DNAJC2Q99543 621 aaKnown RBP13.28□□□□□ -0.28
ABR-220ENST00000573325 CABP5Q9NP86 173 aa13.28□□□□□ -0.28
ABR-220ENST00000573325 SWAP70Q9UH65 585 aa13.28□□□□□ -0.28
ABR-220ENST00000573325 LTBP2Q14767 1821 aa13.27□□□□□ -0.28
ABR-220ENST00000573325 IGKV6D-41A0A0C4DH26 115 aa13.27□□□□□ -0.29
ABR-220ENST00000573325 PRAMEF19Q5SWL8 479 aa13.27□□□□□ -0.29
ABR-220ENST00000573325 C1orf53Q5VUE5 145 aa13.27□□□□□ -0.29
ABR-220ENST00000573325 SPICE1Q8N0Z3 855 aa13.27□□□□□ -0.29
ABR-220ENST00000573325 DEFB123Q8N688 67 aa13.27□□□□□ -0.29
ABR-220ENST00000573325 MB21D1Q8N884 522 aa13.27□□□□□ -0.29
ABR-220ENST00000573325 MAML3Q96JK9 1138 aa13.27□□□□□ -0.29
ABR-220ENST00000573325 SENP6Q9GZR1 1112 aaPredicted RBP13.27□□□□□ -0.29
ABR-220ENST00000573325 BAZ2AQ9UIF9 1905 aaKnown RBP13.27□□□□□ -0.29
ABR-220ENST00000573325 SMCHD1A6NHR9 2005 aa13.26□□□□□ -0.29
ABR-220ENST00000573325 GSG1L2A8MUP6 293 aa13.26□□□□□ -0.29
ABR-220ENST00000573325 SEPT4O43236 478 aa13.26□□□□□ -0.29
ABR-220ENST00000573325 MSCO60682 206 aa13.26□□□□□ -0.29
ABR-220ENST00000573325 GLRX3O76003 335 aaKnown RBP13.26□□□□□ -0.29
ABR-220ENST00000573325 EEF2P13639 858 aaKnown RBP13.26□□□□□ -0.29
ABR-220ENST00000573325 ITGB8P26012 769 aa13.26□□□□□ -0.29
ABR-220ENST00000573325 MDM2Q00987 491 aaPredicted RBP13.26□□□□□ -0.29
ABR-220ENST00000573325 ATP2B2Q01814 1243 aa13.26□□□□□ -0.29
ABR-220ENST00000573325 ZNF792Q3KQV3 632 aa13.26□□□□□ -0.29
ABR-220ENST00000573325 FAM109BQ6ICB4 259 aaPredicted RBP13.26□□□□□ -0.29
ABR-220ENST00000573325 CCDC17Q96LX7 622 aa13.26□□□□□ -0.29
ABR-220ENST00000573325 FGD4Q96M96 766 aa13.26□□□□□ -0.29
ABR-220ENST00000573325 ROBO3Q96MS0 1386 aa13.26□□□□□ -0.29
ABR-220ENST00000573325 GUCD1Q96NT3 240 aa13.26□□□□□ -0.29
ABR-220ENST00000573325 STRBPQ96SI9 672 aaKnown RBP13.26□□□□□ -0.29
ABR-220ENST00000573325 UBE2OQ9C0C9 1292 aaKnown RBP13.26□□□□□ -0.29
ABR-220ENST00000573325 EPB41L4AQ9HCS5 686 aaPredicted RBP13.26□□□□□ -0.29
ABR-220ENST00000573325 DDX19BQ9UMR2 479 aa13.26□□□□□ -0.29
ABR-220ENST00000573325 STXBP5LQ9Y2K9 1186 aa13.26□□□□□ -0.29
ABR-220ENST00000573325 DNAJC25-GNG10A0A024R161 153 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms