RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 FERMT2Q96AC1 680 aa12.77□□□□□ -0.37
RPAIN-212ENST00000573126 CRNKL1Q9BZJ0 848 aaKnown RBP12.77□□□□□ -0.37
RPAIN-212ENST00000573126 BLZF1Q9H2G9 400 aa12.77□□□□□ -0.37
RPAIN-212ENST00000573126 ZHX1Q9UKY1 873 aaPredicted RBP12.77□□□□□ -0.37
RPAIN-212ENST00000573126 SYNRGQ9UMZ2 1314 aa12.77□□□□□ -0.37
RPAIN-212ENST00000573126 STX10O60499 249 aa12.76□□□□□ -0.37
RPAIN-212ENST00000573126 MTF1Q14872 753 aa12.76□□□□□ -0.37
RPAIN-212ENST00000573126 NR1I3Q14994 352 aa12.76□□□□□ -0.37
RPAIN-212ENST00000573126 FAM98CQ17RN3 349 aaKnown RBP12.76□□□□□ -0.37
RPAIN-212ENST00000573126 ARHGAP29Q52LW3 1261 aa12.76□□□□□ -0.37
RPAIN-212ENST00000573126 CPLX3Q8WVH0 158 aa12.76□□□□□ -0.37
RPAIN-212ENST00000573126 WDR24Q96S15 920 aa12.76□□□□□ -0.37
RPAIN-212ENST00000573126 A0A1B0GTH6 734 aa12.76□□□□□ -0.37
RPAIN-212ENST00000573126 TUBB4AP04350 444 aa12.76□□□□□ -0.37
RPAIN-212ENST00000573126 PCP11498 1178 aaKnown RBP12.76□□□□□ -0.37
RPAIN-212ENST00000573126 SCG2P13521 617 aa12.76□□□□□ -0.37
RPAIN-212ENST00000573126 GNG11P61952 73 aa12.76□□□□□ -0.37
RPAIN-212ENST00000573126 DPYDQ12882 1025 aa12.76□□□□□ -0.37
RPAIN-212ENST00000573126 CUL4BQ13620 913 aa12.76□□□□□ -0.37
RPAIN-212ENST00000573126 SH3RF1Q7Z6J0 888 aa12.76□□□□□ -0.37
RPAIN-212ENST00000573126 FCHSD1Q86WN1 690 aa12.76□□□□□ -0.37
RPAIN-212ENST00000573126 NBPF5PQ86XG9 351 aaPredicted RBP12.76□□□□□ -0.37
RPAIN-212ENST00000573126 NLRP3Q96P20 1036 aa12.76□□□□□ -0.37
RPAIN-212ENST00000573126 NOL10Q9BSC4 688 aaKnown RBP12.76□□□□□ -0.37
RPAIN-212ENST00000573126 ZNF446Q9NWS9 450 aa12.76□□□□□ -0.37
RPAIN-212ENST00000573126 MCM9Q9NXL9 1143 aa12.76□□□□□ -0.37
RPAIN-212ENST00000573126 PARP3Q9Y6F1 533 aa12.76□□□□□ -0.37
RPAIN-212ENST00000573126 WNK3Q9BYP7 1800 aa12.76□□□□□ -0.37
RPAIN-212ENST00000573126 USP17L8P0C7I0 530 aa12.75□□□□□ -0.37
RPAIN-212ENST00000573126 CDC25AP30304 524 aa12.75□□□□□ -0.37
RPAIN-212ENST00000573126 ATP2C1P98194 919 aaPredicted RBP12.75□□□□□ -0.37
RPAIN-212ENST00000573126 APTXQ7Z2E3 356 aaKnown RBP12.75□□□□□ -0.37
RPAIN-212ENST00000573126 MTMR7Q9Y216 660 aa12.75□□□□□ -0.37
RPAIN-212ENST00000573126 MYH6P13533 1939 aa12.75□□□□□ -0.37
RPAIN-212ENST00000573126 ORC4O43929 436 aa12.75□□□□□ -0.37
RPAIN-212ENST00000573126 BMP15O95972 392 aa12.75□□□□□ -0.37
RPAIN-212ENST00000573126 SPATA1Q5VX52 437 aa12.75□□□□□ -0.37
RPAIN-212ENST00000573126 MNS1Q8NEH6 495 aa12.75□□□□□ -0.37
RPAIN-212ENST00000573126 GPKOWQ92917 476 aaPredicted RBP eCLIP12.75□□□□□ -0.37
RPAIN-212ENST00000573126 CARD6Q9BX69 1037 aa12.75□□□□□ -0.37
RPAIN-212ENST00000573126 MORC2Q9Y6X9 1032 aaPredicted RBP12.75□□□□□ -0.37
RPAIN-212ENST00000573126 XDHP47989 1333 aa12.75□□□□□ -0.37
RPAIN-212ENST00000573126 SOWAHDA6NJG2 315 aa12.75□□□□□ -0.37
RPAIN-212ENST00000573126 KARSQ15046 597 aaKnown RBP12.75□□□□□ -0.37
RPAIN-212ENST00000573126 GSDMAQ96QA5 445 aa12.75□□□□□ -0.37
RPAIN-212ENST00000573126 SETDB2Q96T68 719 aa12.75□□□□□ -0.37
RPAIN-212ENST00000573126 ATP8A2Q9NTI2 1148 aa12.75□□□□□ -0.37
RPAIN-212ENST00000573126 LAMB2P55268 1798 aa12.74□□□□□ -0.37
RPAIN-212ENST00000573126 SEMA3EO15041 775 aa12.74□□□□□ -0.37
RPAIN-212ENST00000573126 IL17AQ16552 155 aa12.74□□□□□ -0.37
RPAIN-212ENST00000573126 RCSD1Q6JBY9 416 aa12.74□□□□□ -0.37
RPAIN-212ENST00000573126 DZIP1Q86YF9 867 aaKnown RBP12.74□□□□□ -0.37
RPAIN-212ENST00000573126 IGSF22Q8N9C0 903 aa12.74□□□□□ -0.37
RPAIN-212ENST00000573126 RASGRP4Q8TDF6 673 aa12.74□□□□□ -0.37
RPAIN-212ENST00000573126 UBXN4Q92575 508 aa12.74□□□□□ -0.37
RPAIN-212ENST00000573126 ARPP21Q9UBL0 812 aaPredicted RBP12.74□□□□□ -0.37
RPAIN-212ENST00000573126 CTNND2Q9UQB3 1225 aa12.74□□□□□ -0.37
RPAIN-212ENST00000573126 RREB1Q92766 1687 aa12.74□□□□□ -0.37
RPAIN-212ENST00000573126 PPP1R3GB7ZBB8 358 aa12.74□□□□□ -0.37
RPAIN-212ENST00000573126 AKR1B15C9JRZ8 316 aaPredicted RBP12.74□□□□□ -0.37
RPAIN-212ENST00000573126 H2AFXP16104 143 aaPredicted RBP12.74□□□□□ -0.37
RPAIN-212ENST00000573126 CCT6AP40227 531 aaKnown RBP12.74□□□□□ -0.37
RPAIN-212ENST00000573126 RBL2Q08999 1139 aa12.74□□□□□ -0.37
RPAIN-212ENST00000573126 PFKFB3Q16875 520 aaPredicted RBP12.74□□□□□ -0.37
RPAIN-212ENST00000573126 SLC10A5Q5PT55 438 aa12.74□□□□□ -0.37
RPAIN-212ENST00000573126 CREBRFQ8IUR6 639 aa12.74□□□□□ -0.37
RPAIN-212ENST00000573126 DYNLL2Q96FJ2 89 aa12.74□□□□□ -0.37
RPAIN-212ENST00000573126 MTRQ99707 1265 aa12.74□□□□□ -0.37
RPAIN-212ENST00000573126 IRX2Q9BZI1 471 aaPredicted RBP12.74□□□□□ -0.37
RPAIN-212ENST00000573126 CLCN6P51797 869 aa12.73□□□□□ -0.37
RPAIN-212ENST00000573126 E2F4Q16254 413 aa12.73□□□□□ -0.37
RPAIN-212ENST00000573126 BARGINQ6ZT62 677 aa12.73□□□□□ -0.37
RPAIN-212ENST00000573126 KRT222Q8N1A0 295 aa12.73□□□□□ -0.37
RPAIN-212ENST00000573126 STAG2Q8N3U4 1231 aa12.73□□□□□ -0.37
RPAIN-212ENST00000573126 IQUBQ8NA54 791 aa12.73□□□□□ -0.37
RPAIN-212ENST00000573126 EPC1Q9H2F5 836 aa12.73□□□□□ -0.37
RPAIN-212ENST00000573126 MRPL44Q9H9J2 332 aaKnown RBP12.73□□□□□ -0.37
RPAIN-212ENST00000573126 ADD3Q9UEY8 706 aaKnown RBP12.73□□□□□ -0.37
RPAIN-212ENST00000573126 FAM205AQ6ZU69 1335 aa12.73□□□□□ -0.37
RPAIN-212ENST00000573126 COL22A1Q8NFW1 1626 aaPredicted RBP12.73□□□□□ -0.37
RPAIN-212ENST00000573126 GNPATO15228 680 aa12.73□□□□□ -0.37
RPAIN-212ENST00000573126 TFAP4Q01664 338 aa12.73□□□□□ -0.37
RPAIN-212ENST00000573126 CDKAL1Q5VV42 579 aa12.73□□□□□ -0.37
RPAIN-212ENST00000573126 LZTFL1Q9NQ48 299 aa12.73□□□□□ -0.37
RPAIN-212ENST00000573126 MAPK8IP1Q9UQF2 711 aa12.73□□□□□ -0.37
RPAIN-212ENST00000573126 A0A0U1RQJ8 604 aa12.72□□□□□ -0.37
RPAIN-212ENST00000573126 CASQ1P31415 396 aa12.72□□□□□ -0.37
RPAIN-212ENST00000573126 UTP14CQ5TAP6 766 aaKnown RBP12.72□□□□□ -0.37
RPAIN-212ENST00000573126 RRAGBQ5VZM2 374 aa12.72□□□□□ -0.37
RPAIN-212ENST00000573126 PPFIBP1Q86W92 1011 aa12.72□□□□□ -0.37
RPAIN-212ENST00000573126 AMIGO3Q86WK7 504 aa12.72□□□□□ -0.37
RPAIN-212ENST00000573126 ATRIPQ8WXE1 791 aa12.72□□□□□ -0.37
RPAIN-212ENST00000573126 GTPBP4Q9BZE4 634 aaKnown RBP12.72□□□□□ -0.37
RPAIN-212ENST00000573126 KAT14Q9H8E8 782 aa12.72□□□□□ -0.37
RPAIN-212ENST00000573126 ST7Q9NRC1 585 aa12.72□□□□□ -0.37
RPAIN-212ENST00000573126 IL17RBQ9NRM6 502 aa12.72□□□□□ -0.37
RPAIN-212ENST00000573126 SCN7AQ01118 1682 aa12.72□□□□□ -0.37
RPAIN-212ENST00000573126 MYH13Q9UKX3 1938 aa12.72□□□□□ -0.37
RPAIN-212ENST00000573126 AHDC1Q5TGY3 1603 aaPredicted RBP12.72□□□□□ -0.37
RPAIN-212ENST00000573126 ZPR1O75312 459 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms