RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 PKN2Q16513 984 aaKnown RBP9.07□□□□□ -0.96
NUP88-205ENST00000572809 CCL15Q16663 113 aa9.07□□□□□ -0.96
NUP88-205ENST00000572809 NAA16Q6N069 864 aaPredicted RBP9.07□□□□□ -0.96
NUP88-205ENST00000572809 SH3BP5LQ7L8J4 393 aa9.07□□□□□ -0.96
NUP88-205ENST00000572809 CLASRPQ8N2M8 674 aaKnown RBP9.07□□□□□ -0.96
NUP88-205ENST00000572809 KIF1BPQ96EK5 621 aa9.07□□□□□ -0.96
NUP88-205ENST00000572809 NOL10Q9BSC4 688 aaKnown RBP9.07□□□□□ -0.96
NUP88-205ENST00000572809 IL1RAPL2Q9NP60 686 aa9.07□□□□□ -0.96
NUP88-205ENST00000572809 DDX4Q9NQI0 724 aaKnown RBP9.07□□□□□ -0.96
NUP88-205ENST00000572809 LIMD1Q9UGP4 676 aa9.07□□□□□ -0.96
NUP88-205ENST00000572809 AK9Q5TCS8 1911 aa9.07□□□□□ -0.96
NUP88-205ENST00000572809 TRAK2O60296 914 aa9.06□□□□□ -0.96
NUP88-205ENST00000572809 KDM4AO75164 1064 aa9.06□□□□□ -0.96
NUP88-205ENST00000572809 USP46P62068 366 aa9.06□□□□□ -0.96
NUP88-205ENST00000572809 PPIL2Q13356 520 aa9.06□□□□□ -0.96
NUP88-205ENST00000572809 SNAPC2Q13487 334 aa9.06□□□□□ -0.96
NUP88-205ENST00000572809 LCE2CQ5TA81 110 aa9.06□□□□□ -0.96
NUP88-205ENST00000572809 BRI3BPQ8WY22 251 aa9.06□□□□□ -0.96
NUP88-205ENST00000572809 BCL11AQ9H165 835 aa9.06□□□□□ -0.96
NUP88-205ENST00000572809 ZFYVE28Q9HCC9 887 aa9.06□□□□□ -0.96
NUP88-205ENST00000572809 PIH1D3Q9NQM4 214 aaKnown RBP9.06□□□□□ -0.96
NUP88-205ENST00000572809 AATFQ9NY61 560 aaKnown RBP eCLIP9.06□□□□□ -0.96
NUP88-205ENST00000572809 MOXD2PA6NHM9 499 aa9.05□□□□□ -0.96
NUP88-205ENST00000572809 PHF20L1A8MW92 1017 aa9.05□□□□□ -0.96
NUP88-205ENST00000572809 CTNND1O60716 968 aaKnown RBP9.05□□□□□ -0.96
NUP88-205ENST00000572809 IDH1O75874 414 aaKnown RBP9.05□□□□□ -0.96
NUP88-205ENST00000572809 IFIT2P09913 472 aaKnown RBP9.05□□□□□ -0.96
NUP88-205ENST00000572809 SNRPBP14678 240 aaKnown RBP9.05□□□□□ -0.96
NUP88-205ENST00000572809 CYP7A1P22680 504 aa9.05□□□□□ -0.96
NUP88-205ENST00000572809 CRHR2Q13324 411 aa9.05□□□□□ -0.96
NUP88-205ENST00000572809 NOL9Q5SY16 702 aaKnown RBP9.05□□□□□ -0.96
NUP88-205ENST00000572809 TEX11Q8IYF3 940 aa9.05□□□□□ -0.96
NUP88-205ENST00000572809 FAM43AQ8N2R8 423 aa9.05□□□□□ -0.96
NUP88-205ENST00000572809 SH3RF3Q8TEJ3 882 aaPredicted RBP9.05□□□□□ -0.96
NUP88-205ENST00000572809 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.05□□□□□ -0.96
NUP88-205ENST00000572809 CXCL11O14625 94 aa9.04□□□□□ -0.96
NUP88-205ENST00000572809 TERTO14746 1132 aaKnown RBP9.04□□□□□ -0.96
NUP88-205ENST00000572809 SLURP2P0DP57 97 aa9.04□□□□□ -0.96
NUP88-205ENST00000572809 GCGRP47871 477 aa9.04□□□□□ -0.96
NUP88-205ENST00000572809 SP3Q02447 781 aa9.04□□□□□ -0.96
NUP88-205ENST00000572809 MAP3K12Q12852 859 aa9.04□□□□□ -0.96
NUP88-205ENST00000572809 TAF1CQ15572 869 aaPredicted RBP9.04□□□□□ -0.96
NUP88-205ENST00000572809 ADGRA1Q86SQ6 560 aa9.04□□□□□ -0.96
NUP88-205ENST00000572809 SCYL3Q8IZE3 742 aa9.04□□□□□ -0.96
NUP88-205ENST00000572809 TGFBRAP1Q8WUH2 860 aa9.04□□□□□ -0.96
NUP88-205ENST00000572809 ERO1AQ96HE7 468 aa9.04□□□□□ -0.96
NUP88-205ENST00000572809 OSBPL5Q9H0X9 879 aaPredicted RBP9.04□□□□□ -0.96
NUP88-205ENST00000572809 DHX36Q9H2U1 1008 aaKnown RBP9.04□□□□□ -0.96
NUP88-205ENST00000572809 ANTXR1Q9H6X2 564 aa9.04□□□□□ -0.96
NUP88-205ENST00000572809 PRM3Q9NNZ6 103 aa9.04□□□□□ -0.96
NUP88-205ENST00000572809 ATP13A2Q9NQ11 1180 aa9.04□□□□□ -0.96
NUP88-205ENST00000572809 PICK1Q9NRD5 415 aa9.04□□□□□ -0.96
NUP88-205ENST00000572809 KCNH4Q9UQ05 1017 aa9.04□□□□□ -0.96
NUP88-205ENST00000572809 NDUFB9Q9Y6M9 179 aa9.04□□□□□ -0.96
NUP88-205ENST00000572809 ZHX2Q9Y6X8 837 aa9.04□□□□□ -0.96
NUP88-205ENST00000572809 OTOFQ9HC10 1997 aa9.04□□□□□ -0.96
NUP88-205ENST00000572809 RFX7Q2KHR2 1363 aa9.03□□□□□ -0.96
NUP88-205ENST00000572809 ATRNL1Q5VV63 1379 aa9.03□□□□□ -0.96
NUP88-205ENST00000572809 BTBD19C9JJ37 291 aa9.03□□□□□ -0.96
NUP88-205ENST00000572809 PTPRAP18433 802 aa9.03□□□□□ -0.96
NUP88-205ENST00000572809 NDUFV2P19404 249 aa9.03□□□□□ -0.96
NUP88-205ENST00000572809 DYNLL1P63167 89 aaKnown RBP9.03□□□□□ -0.96
NUP88-205ENST00000572809 TTF1Q15361 905 aaPredicted RBP9.03□□□□□ -0.96
NUP88-205ENST00000572809 CSPP1Q1MSJ5 1256 aa9.03□□□□□ -0.96
NUP88-205ENST00000572809 MORN1Q5T089 497 aa9.03□□□□□ -0.96
NUP88-205ENST00000572809 TMED8Q6PL24 325 aaPredicted RBP9.03□□□□□ -0.96
NUP88-205ENST00000572809 FOXP4Q8IVH2 680 aaPredicted RBP9.03□□□□□ -0.96
NUP88-205ENST00000572809 FAM160A2Q8N612 972 aaPredicted RBP9.03□□□□□ -0.96
NUP88-205ENST00000572809 MAGEB6Q8N7X4 407 aa9.03□□□□□ -0.96
NUP88-205ENST00000572809 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.03□□□□□ -0.96
NUP88-205ENST00000572809 THAP11Q96EK4 314 aa9.03□□□□□ -0.96
NUP88-205ENST00000572809 ZCCHC17Q9NP64 241 aaKnown RBP9.03□□□□□ -0.96
NUP88-205ENST00000572809 PI4KBQ9UBF8 816 aa9.03□□□□□ -0.96
NUP88-205ENST00000572809 FAM196BA6NMK8 535 aa9.02□□□□□ -0.97
NUP88-205ENST00000572809 PDHXO00330 501 aa9.02□□□□□ -0.97
NUP88-205ENST00000572809 ZBTB24O43167 697 aaPredicted RBP9.02□□□□□ -0.97
NUP88-205ENST00000572809 TLR2O60603 784 aa9.02□□□□□ -0.97
NUP88-205ENST00000572809 RGS19P49795 217 aa9.02□□□□□ -0.97
NUP88-205ENST00000572809 ARHGEF6Q15052 776 aa9.02□□□□□ -0.97
NUP88-205ENST00000572809 PRPF38BQ5VTL8 546 aaKnown RBP9.02□□□□□ -0.97
NUP88-205ENST00000572809 FBXO46Q6PJ61 603 aaPredicted RBP9.02□□□□□ -0.97
NUP88-205ENST00000572809 FASTKD5Q7L8L6 764 aaKnown RBP9.02□□□□□ -0.97
NUP88-205ENST00000572809 ANKRD23Q86SG2 305 aa9.02□□□□□ -0.97
NUP88-205ENST00000572809 CERS3Q8IU89 383 aa9.02□□□□□ -0.97
NUP88-205ENST00000572809 MAPKAPK5Q8IW41 473 aa9.02□□□□□ -0.97
NUP88-205ENST00000572809 MIGA1Q8NAN2 632 aa9.02□□□□□ -0.97
NUP88-205ENST00000572809 CD99L2Q8TCZ2 262 aa9.02□□□□□ -0.97
NUP88-205ENST00000572809 YTHDC1Q96MU7 727 aaKnown RBP9.02□□□□□ -0.97
NUP88-205ENST00000572809 LRRCC1Q9C099 1032 aa9.02□□□□□ -0.97
NUP88-205ENST00000572809 HERC5Q9UII4 1024 aaKnown RBP9.02□□□□□ -0.97
NUP88-205ENST00000572809 PALD1Q9ULE6 856 aa9.02□□□□□ -0.97
NUP88-205ENST00000572809 AFG3L2Q9Y4W6 797 aa9.02□□□□□ -0.97
NUP88-205ENST00000572809 TRIM17Q9Y577 477 aa9.02□□□□□ -0.97
NUP88-205ENST00000572809 LAMB1P07942 1786 aa9.01□□□□□ -0.97
NUP88-205ENST00000572809 GOLIM4O00461 696 aa9.01□□□□□ -0.97
NUP88-205ENST00000572809 LILRB3O75022 631 aa9.01□□□□□ -0.97
NUP88-205ENST00000572809 SMPD1P17405 629 aa9.01□□□□□ -0.97
NUP88-205ENST00000572809 ATP5JP18859 108 aa9.01□□□□□ -0.97
NUP88-205ENST00000572809 CAP2P40123 477 aa9.01□□□□□ -0.97
NUP88-205ENST00000572809 USP5P45974 858 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms