RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 PGBD1Q96JS3 809 aa23.74■■□□□ 1.39
CHRNE-202ENST00000572438 VPS54Q9P1Q0 977 aa23.74■■□□□ 1.39
CHRNE-202ENST00000572438 TTLL1O95922 423 aa23.73■■□□□ 1.39
CHRNE-202ENST00000572438 NASPP49321 788 aaPredicted RBP23.73■■□□□ 1.39
CHRNE-202ENST00000572438 RASSF7Q02833 373 aa23.73■■□□□ 1.39
CHRNE-202ENST00000572438 PFKFB3Q16875 520 aaPredicted RBP23.73■■□□□ 1.39
CHRNE-202ENST00000572438 PPP4R3BQ5MIZ7 849 aa23.73■■□□□ 1.39
CHRNE-202ENST00000572438 TATDN1Q6P1N9 297 aa23.73■■□□□ 1.39
CHRNE-202ENST00000572438 NOSTRINQ8IVI9 506 aa23.73■■□□□ 1.39
CHRNE-202ENST00000572438 SHISA4Q96DD7 197 aa23.73■■□□□ 1.39
CHRNE-202ENST00000572438 MTMR7Q9Y216 660 aa23.73■■□□□ 1.39
CHRNE-202ENST00000572438 CLRN2A0PK11 232 aa23.73■■□□□ 1.39
CHRNE-202ENST00000572438 BTBD18B2RXH4 712 aa23.73■■□□□ 1.39
CHRNE-202ENST00000572438 MPHOSPH10O00566 681 aaKnown RBP23.73■■□□□ 1.39
CHRNE-202ENST00000572438 YEATS4O95619 227 aa23.73■■□□□ 1.39
CHRNE-202ENST00000572438 SLURP2P0DP57 97 aa23.73■■□□□ 1.39
CHRNE-202ENST00000572438 SCG2P13521 617 aa23.73■■□□□ 1.39
CHRNE-202ENST00000572438 MMP14P50281 582 aa23.73■■□□□ 1.39
CHRNE-202ENST00000572438 ZBED3Q96IU2 234 aaPredicted RBP23.73■■□□□ 1.39
CHRNE-202ENST00000572438 PHF20Q9BVI0 1012 aa23.73■■□□□ 1.39
CHRNE-202ENST00000572438 CLIC4Q9Y696 253 aa23.73■■□□□ 1.39
CHRNE-202ENST00000572438 MYH8P13535 1937 aa23.72■■□□□ 1.39
CHRNE-202ENST00000572438 FAM196BA6NMK8 535 aa23.72■■□□□ 1.39
CHRNE-202ENST00000572438 TCP10L2B9ZVM9 353 aa23.72■■□□□ 1.39
CHRNE-202ENST00000572438 PARP1P09874 1014 aaKnown RBP23.72■■□□□ 1.39
CHRNE-202ENST00000572438 CCDC183Q5T5S1 534 aa23.72■■□□□ 1.39
CHRNE-202ENST00000572438 FKBP1CQ5VVH2 108 aa23.72■■□□□ 1.39
CHRNE-202ENST00000572438 RPS12P25398 132 aaKnown RBP23.71■■□□□ 1.39
CHRNE-202ENST00000572438 CERKLQ49MI3 558 aaPredicted RBP23.71■■□□□ 1.39
CHRNE-202ENST00000572438 ANO1Q5XXA6 986 aa23.71■■□□□ 1.39
CHRNE-202ENST00000572438 LINC00301Q8NCQ3 95 aa23.71■■□□□ 1.39
CHRNE-202ENST00000572438 FAM151AQ8WW52 585 aa23.71■■□□□ 1.39
CHRNE-202ENST00000572438 CSRNP1Q96S65 589 aa23.71■■□□□ 1.39
CHRNE-202ENST00000572438 CLIP2Q9UDT6 1046 aa23.71■■□□□ 1.39
CHRNE-202ENST00000572438 KLRF2D3W0D1 207 aa23.7■■□□□ 1.39
CHRNE-202ENST00000572438 STK38Q15208 465 aa23.7■■□□□ 1.39
CHRNE-202ENST00000572438 GAS2L3Q86XJ1 694 aa23.7■■□□□ 1.39
CHRNE-202ENST00000572438 CLEC10AQ8IUN9 316 aa23.7■■□□□ 1.39
CHRNE-202ENST00000572438 MYH6P13533 1939 aa23.7■■□□□ 1.38
CHRNE-202ENST00000572438 GREB1LQ9C091 1923 aaPredicted RBP23.7■■□□□ 1.38
CHRNE-202ENST00000572438 GOLGA8HP0CJ92 632 aa23.7■■□□□ 1.38
CHRNE-202ENST00000572438 PRELPP51888 382 aa23.7■■□□□ 1.38
CHRNE-202ENST00000572438 EIF6P56537 245 aaKnown RBP23.7■■□□□ 1.38
CHRNE-202ENST00000572438 SLC35G1Q2M3R5 365 aa23.7■■□□□ 1.38
CHRNE-202ENST00000572438 BICD2Q8TD16 824 aa23.7■■□□□ 1.38
CHRNE-202ENST00000572438 KCNG4Q8TDN1 519 aa23.7■■□□□ 1.38
CHRNE-202ENST00000572438 SPZ1Q9BXG8 430 aa23.7■■□□□ 1.38
CHRNE-202ENST00000572438 MYOZ2Q9NPC6 264 aa23.7■■□□□ 1.38
CHRNE-202ENST00000572438 ARFGEF1Q9Y6D6 1849 aa23.7■■□□□ 1.38
CHRNE-202ENST00000572438 SYCE3A1L190 88 aa23.69■■□□□ 1.38
CHRNE-202ENST00000572438 FZD9O00144 591 aa23.69■■□□□ 1.38
CHRNE-202ENST00000572438 MYO1BO43795 1136 aa23.69■■□□□ 1.38
CHRNE-202ENST00000572438 PDHBP11177 359 aa23.69■■□□□ 1.38
CHRNE-202ENST00000572438 USP17L2Q6R6M4 530 aa23.69■■□□□ 1.38
CHRNE-202ENST00000572438 RASGRP2Q7LDG7 609 aa23.69■■□□□ 1.38
CHRNE-202ENST00000572438 LRRC47Q8N1G4 583 aaKnown RBP23.69■■□□□ 1.38
CHRNE-202ENST00000572438 PIBF1Q8WXW3 757 aa23.69■■□□□ 1.38
CHRNE-202ENST00000572438 CNTNAP1P78357 1384 aa23.68■■□□□ 1.38
CHRNE-202ENST00000572438 USP17L5A8MUK1 530 aa23.68■■□□□ 1.38
CHRNE-202ENST00000572438 CYTH3O43739 400 aa23.68■■□□□ 1.38
CHRNE-202ENST00000572438 LIG1P18858 919 aa23.68■■□□□ 1.38
CHRNE-202ENST00000572438 SMARCA1P28370 1054 aa23.68■■□□□ 1.38
CHRNE-202ENST00000572438 KRT2P35908 639 aa23.68■■□□□ 1.38
CHRNE-202ENST00000572438 ME1P48163 572 aa23.68■■□□□ 1.38
CHRNE-202ENST00000572438 ZNF280AP59817 542 aaPredicted RBP23.68■■□□□ 1.38
CHRNE-202ENST00000572438 L1TD1Q5T7N2 865 aaKnown RBP23.68■■□□□ 1.38
CHRNE-202ENST00000572438 OXER1Q8TDS5 423 aa23.68■■□□□ 1.38
CHRNE-202ENST00000572438 VEZTQ9HBM0 779 aa23.68■■□□□ 1.38
CHRNE-202ENST00000572438 HERC5Q9UII4 1024 aaKnown RBP23.68■■□□□ 1.38
CHRNE-202ENST00000572438 SNHG28P0DPA3 235 aa23.68■■□□□ 1.38
CHRNE-202ENST00000572438 NR5A1Q13285 461 aa23.68■■□□□ 1.38
CHRNE-202ENST00000572438 SF3A1Q15459 793 aaKnown RBP23.68■■□□□ 1.38
CHRNE-202ENST00000572438 BRMS1Q9HCU9 246 aa23.68■■□□□ 1.38
CHRNE-202ENST00000572438 WNT10BO00744 389 aa23.67■■□□□ 1.38
CHRNE-202ENST00000572438 SPTLC2O15270 562 aa23.67■■□□□ 1.38
CHRNE-202ENST00000572438 ASPRV1Q53RT3 343 aa23.67■■□□□ 1.38
CHRNE-202ENST00000572438 LRSAM1Q6UWE0 723 aa23.67■■□□□ 1.38
CHRNE-202ENST00000572438 TMEM179Q6ZVK1 233 aa23.67■■□□□ 1.38
CHRNE-202ENST00000572438 FAM83AQ86UY5 434 aa23.67■■□□□ 1.38
CHRNE-202ENST00000572438 KANSL2Q9H9L4 492 aa23.67■■□□□ 1.38
CHRNE-202ENST00000572438 SH3GLB2Q9NR46 395 aa23.67■■□□□ 1.38
CHRNE-202ENST00000572438 SHTN1A0MZ66 631 aa23.66■■□□□ 1.38
CHRNE-202ENST00000572438 LETM1O95202 739 aaPredicted RBP23.66■■□□□ 1.38
CHRNE-202ENST00000572438 SLC39A14Q15043 492 aa23.66■■□□□ 1.38
CHRNE-202ENST00000572438 RILPL1Q5EBL4 403 aa23.66■■□□□ 1.38
CHRNE-202ENST00000572438 PCDHA7Q9UN72 937 aa23.66■■□□□ 1.38
CHRNE-202ENST00000572438 VEGFAP15692 232 aaPredicted RBP23.66■■□□□ 1.38
CHRNE-202ENST00000572438 NPY5RQ15761 445 aa23.66■■□□□ 1.38
CHRNE-202ENST00000572438 ABCB5Q2M3G0 1257 aa23.66■■□□□ 1.38
CHRNE-202ENST00000572438 NBPF9Q3BBW0 867 aa23.66■■□□□ 1.38
CHRNE-202ENST00000572438 NYAP2Q9P242 653 aa23.66■■□□□ 1.38
CHRNE-202ENST00000572438 GMPSP49915 693 aaPredicted RBP23.65■■□□□ 1.38
CHRNE-202ENST00000572438 NLRP5P59047 1200 aa23.65■■□□□ 1.38
CHRNE-202ENST00000572438 ATP2B2Q01814 1243 aa23.65■■□□□ 1.38
CHRNE-202ENST00000572438 ADALQ6DHV7 355 aa23.65■■□□□ 1.38
CHRNE-202ENST00000572438 DPF2Q92785 391 aa23.65■■□□□ 1.38
CHRNE-202ENST00000572438 MKL1Q969V6 931 aa23.65■■□□□ 1.38
CHRNE-202ENST00000572438 FHDC1Q9C0D6 1143 aaPredicted RBP23.65■■□□□ 1.38
CHRNE-202ENST00000572438 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.65■■□□□ 1.38
CHRNE-202ENST00000572438 MRE11P49959 708 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms