RNA–Protein interactions for RNA: ENST00000572205.5

SMG6-210, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-210ENST00000572205 POLR3DP05423 398 aaPredicted RBP10.41□□□□□ -0.74
SMG6-210ENST00000572205 FGRP09769 529 aa10.41□□□□□ -0.74
SMG6-210ENST00000572205 VCAM1P19320 739 aa10.41□□□□□ -0.74
SMG6-210ENST00000572205 OTUD7BQ6GQQ9 843 aa10.41□□□□□ -0.74
SMG6-210ENST00000572205 GADL1Q6ZQY3 521 aa10.41□□□□□ -0.74
SMG6-210ENST00000572205 FASTKD5Q7L8L6 764 aaKnown RBP10.41□□□□□ -0.74
SMG6-210ENST00000572205 PARK7Q99497 189 aaKnown RBP10.41□□□□□ -0.74
SMG6-210ENST00000572205 ASCC2Q9H1I8 757 aaPredicted RBP10.41□□□□□ -0.74
SMG6-210ENST00000572205 MORF4L1Q9UBU8 362 aa10.41□□□□□ -0.74
SMG6-210ENST00000572205 HPS5Q9UPZ3 1129 aa10.41□□□□□ -0.74
SMG6-210ENST00000572205 DNAH12Q6ZR08 3092 aa10.41□□□□□ -0.74
SMG6-210ENST00000572205 CCDC171Q6TFL3 1326 aa10.4□□□□□ -0.74
SMG6-210ENST00000572205 PATL2C9JE40 543 aaKnown RBP10.4□□□□□ -0.74
SMG6-210ENST00000572205 USP17L10C9JJH3 530 aa10.4□□□□□ -0.74
SMG6-210ENST00000572205 GNAT2P19087 354 aa10.4□□□□□ -0.74
SMG6-210ENST00000572205 SDSP20132 328 aa10.4□□□□□ -0.74
SMG6-210ENST00000572205 NOVP48745 357 aa10.4□□□□□ -0.74
SMG6-210ENST00000572205 ALX1Q15699 326 aa10.4□□□□□ -0.74
SMG6-210ENST00000572205 FAM110CQ1W6H9 321 aa10.4□□□□□ -0.74
SMG6-210ENST00000572205 FBXO46Q6PJ61 603 aaPredicted RBP10.4□□□□□ -0.74
SMG6-210ENST00000572205 TMEM179Q6ZVK1 233 aa10.4□□□□□ -0.74
SMG6-210ENST00000572205 ERO1AQ96HE7 468 aa10.4□□□□□ -0.74
SMG6-210ENST00000572205 AS3MTQ9HBK9 375 aa10.4□□□□□ -0.74
SMG6-210ENST00000572205 HELLSQ9NRZ9 838 aa10.4□□□□□ -0.74
SMG6-210ENST00000572205 ANAPC4Q9UJX5 808 aa10.4□□□□□ -0.74
SMG6-210ENST00000572205 PTPN22Q9Y2R2 807 aa10.4□□□□□ -0.74
SMG6-210ENST00000572205 C19orf81C9J6K1 198 aa10.39□□□□□ -0.75
SMG6-210ENST00000572205 HSPD1P10809 573 aaKnown RBP10.39□□□□□ -0.75
SMG6-210ENST00000572205 PPARAQ07869 468 aa10.39□□□□□ -0.75
SMG6-210ENST00000572205 RAB3GAP1Q15042 981 aa10.39□□□□□ -0.75
SMG6-210ENST00000572205 LBX2Q6XYB7 198 aa10.39□□□□□ -0.75
SMG6-210ENST00000572205 TBC1D10CQ8IV04 446 aa10.39□□□□□ -0.75
SMG6-210ENST00000572205 ARMC5Q96C12 935 aa10.39□□□□□ -0.75
SMG6-210ENST00000572205 INCENPQ9NQS7 918 aa10.39□□□□□ -0.75
SMG6-210ENST00000572205 TMX2Q9Y320 296 aa10.39□□□□□ -0.75
SMG6-210ENST00000572205 FARP1Q9Y4F1 1045 aaPredicted RBP10.39□□□□□ -0.75
SMG6-210ENST00000572205 TRIM17Q9Y577 477 aa10.39□□□□□ -0.75
SMG6-210ENST00000572205 PTCH2Q9Y6C5 1203 aa10.39□□□□□ -0.75
SMG6-210ENST00000572205 RANBP2P49792 3224 aaKnown RBP10.38□□□□□ -0.75
SMG6-210ENST00000572205 PDE4DIPQ5VU43 2346 aa10.38□□□□□ -0.75
SMG6-210ENST00000572205 SPDYE16A6NNV3 312 aaPredicted RBP10.38□□□□□ -0.75
SMG6-210ENST00000572205 PRDM1O75626 825 aa10.38□□□□□ -0.75
SMG6-210ENST00000572205 OSBPP22059 807 aa10.38□□□□□ -0.75
SMG6-210ENST00000572205 HERVK_113P62684 666 aa10.38□□□□□ -0.75
SMG6-210ENST00000572205 ICA1Q05084 483 aa10.38□□□□□ -0.75
SMG6-210ENST00000572205 MCMDC2Q4G0Z9 681 aa10.38□□□□□ -0.75
SMG6-210ENST00000572205 USP17L2Q6R6M4 530 aa10.38□□□□□ -0.75
SMG6-210ENST00000572205 RASGRP2Q7LDG7 609 aa10.38□□□□□ -0.75
SMG6-210ENST00000572205 CCDC17Q96LX7 622 aa10.38□□□□□ -0.75
SMG6-210ENST00000572205 P2RX7Q99572 595 aaKnown RBP10.38□□□□□ -0.75
SMG6-210ENST00000572205 RBPJLQ9UBG7 517 aa10.38□□□□□ -0.75
SMG6-210ENST00000572205 IGHA2P01877 340 aa10.37□□□□□ -0.75
SMG6-210ENST00000572205 FGAP02671 866 aa10.37□□□□□ -0.75
SMG6-210ENST00000572205 EEF2P13639 858 aaKnown RBP10.37□□□□□ -0.75
SMG6-210ENST00000572205 TDO2P48775 406 aa10.37□□□□□ -0.75
SMG6-210ENST00000572205 PRKCZQ05513 592 aa10.37□□□□□ -0.75
SMG6-210ENST00000572205 ZYXQ15942 572 aaKnown RBP10.37□□□□□ -0.75
SMG6-210ENST00000572205 PKN2Q16513 984 aaKnown RBP10.37□□□□□ -0.75
SMG6-210ENST00000572205 CATSPERGQ6ZRH7 1159 aa10.37□□□□□ -0.75
SMG6-210ENST00000572205 ANKRD13CQ8N6S4 541 aa10.37□□□□□ -0.75
SMG6-210ENST00000572205 REPS2Q8NFH8 660 aa10.37□□□□□ -0.75
SMG6-210ENST00000572205 CEP95Q96GE4 821 aa10.37□□□□□ -0.75
SMG6-210ENST00000572205 TRIM34Q9BYJ4 488 aa10.37□□□□□ -0.75
SMG6-210ENST00000572205 VCPKMTQ9H867 229 aa10.37□□□□□ -0.75
SMG6-210ENST00000572205 EFCC1Q9HA90 598 aa10.37□□□□□ -0.75
SMG6-210ENST00000572205 IL17RBQ9NRM6 502 aa10.37□□□□□ -0.75
SMG6-210ENST00000572205 BTBD7Q9P203 1132 aa10.37□□□□□ -0.75
SMG6-210ENST00000572205 GABRQQ9UN88 632 aa10.37□□□□□ -0.75
SMG6-210ENST00000572205 MCM3APO60318 1980 aa10.37□□□□□ -0.75
SMG6-210ENST00000572205 NEDD4P46934 1319 aa10.36□□□□□ -0.75
SMG6-210ENST00000572205 MINDY4BA8MYZ0 360 aa10.36□□□□□ -0.75
SMG6-210ENST00000572205 TRIM6-TRIM34B2RNG4 842 aa10.36□□□□□ -0.75
SMG6-210ENST00000572205 ORC4O43929 436 aa10.36□□□□□ -0.75
SMG6-210ENST00000572205 RGS19P49795 217 aa10.36□□□□□ -0.75
SMG6-210ENST00000572205 CTDSPL2Q05D32 466 aa10.36□□□□□ -0.75
SMG6-210ENST00000572205 MFSD10Q14728 455 aa10.36□□□□□ -0.75
SMG6-210ENST00000572205 LRRFIP1Q32MZ4 808 aaKnown RBP10.36□□□□□ -0.75
SMG6-210ENST00000572205 Q3C1V9 767 aa10.36□□□□□ -0.75
SMG6-210ENST00000572205 USP6NLQ92738 828 aa10.36□□□□□ -0.75
SMG6-210ENST00000572205 RILPL2Q969X0 211 aa10.36□□□□□ -0.75
SMG6-210ENST00000572205 ZNF333Q96JL9 665 aa10.36□□□□□ -0.75
SMG6-210ENST00000572205 LARP6Q9BRS8 491 aaKnown RBP10.36□□□□□ -0.75
SMG6-210ENST00000572205 NAPBQ9H115 298 aa10.36□□□□□ -0.75
SMG6-210ENST00000572205 PORCNQ9H237 461 aa10.36□□□□□ -0.75
SMG6-210ENST00000572205 RPAP3Q9H6T3 665 aaPredicted RBP10.36□□□□□ -0.75
SMG6-210ENST00000572205 SRRDQ9UH36 339 aa10.36□□□□□ -0.75
SMG6-210ENST00000572205 GJD2Q9UKL4 321 aa10.36□□□□□ -0.75
SMG6-210ENST00000572205 PNMA3Q9UL41 463 aa10.36□□□□□ -0.75
SMG6-210ENST00000572205 ADAMTS5Q9UNA0 930 aa10.36□□□□□ -0.75
SMG6-210ENST00000572205 TAF6LQ9Y6J9 622 aa10.36□□□□□ -0.75
SMG6-210ENST00000572205 MYH6P13533 1939 aa10.36□□□□□ -0.75
SMG6-210ENST00000572205 RAD50Q92878 1312 aa10.35□□□□□ -0.75
SMG6-210ENST00000572205 CHMLP26374 656 aa10.35□□□□□ -0.75
SMG6-210ENST00000572205 PSMC4P43686 418 aa10.35□□□□□ -0.75
SMG6-210ENST00000572205 GCLCP48506 637 aaPredicted RBP10.35□□□□□ -0.75
SMG6-210ENST00000572205 USP14P54578 494 aa10.35□□□□□ -0.75
SMG6-210ENST00000572205 COL9A3Q14050 684 aaPredicted RBP10.35□□□□□ -0.75
SMG6-210ENST00000572205 RCSD1Q6JBY9 416 aa10.35□□□□□ -0.75
SMG6-210ENST00000572205 CWC27Q6UX04 472 aaKnown RBP10.35□□□□□ -0.75
SMG6-210ENST00000572205 CENPQQ7L2Z9 268 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms