RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 FXNQ16595 210 aa5.36□□□□□ -1.55
UBR1-211ENST00000569971 HDXQ7Z353 690 aa5.36□□□□□ -1.55
UBR1-211ENST00000569971 C12orf40Q86WS4 652 aa5.36□□□□□ -1.55
UBR1-211ENST00000569971 WDR18Q9BV38 432 aa5.36□□□□□ -1.55
UBR1-211ENST00000569971 SSU72Q9NP77 194 aaKnown RBP5.36□□□□□ -1.55
UBR1-211ENST00000569971 DAGLAQ9Y4D2 1042 aa5.36□□□□□ -1.55
UBR1-211ENST00000569971 CSADQ9Y600 493 aa5.36□□□□□ -1.55
UBR1-211ENST00000569971 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.36□□□□□ -1.55
UBR1-211ENST00000569971 PRR36Q9H6K5 1346 aa5.36□□□□□ -1.55
UBR1-211ENST00000569971 PDPK1O15530 556 aa5.35□□□□□ -1.55
UBR1-211ENST00000569971 DDAH1O94760 285 aa5.35□□□□□ -1.55
UBR1-211ENST00000569971 GJB6O95452 261 aa5.35□□□□□ -1.55
UBR1-211ENST00000569971 PLCG1P19174 1290 aa5.35□□□□□ -1.55
UBR1-211ENST00000569971 ID3Q02535 119 aa5.35□□□□□ -1.55
UBR1-211ENST00000569971 PRKCQQ04759 706 aa5.35□□□□□ -1.55
UBR1-211ENST00000569971 PKN1Q16512 942 aa5.35□□□□□ -1.55
UBR1-211ENST00000569971 LRRFIP1Q32MZ4 808 aaKnown RBP5.35□□□□□ -1.55
UBR1-211ENST00000569971 CYFIP1Q7L576 1253 aa5.35□□□□□ -1.55
UBR1-211ENST00000569971 TTC6Q86TZ1 520 aa5.35□□□□□ -1.55
UBR1-211ENST00000569971 ELMO3Q96BJ8 720 aa5.35□□□□□ -1.55
UBR1-211ENST00000569971 CRIM1Q9NZV1 1036 aa5.35□□□□□ -1.55
UBR1-211ENST00000569971 REV1Q9UBZ9 1251 aa5.35□□□□□ -1.55
UBR1-211ENST00000569971 MAPK8IP1Q9UQF2 711 aa5.35□□□□□ -1.55
UBR1-211ENST00000569971 CARMIL2Q6F5E8 1435 aa5.34□□□□□ -1.55
UBR1-211ENST00000569971 SLC22A31A6NKX4 558 aa5.34□□□□□ -1.55
UBR1-211ENST00000569971 B2RBV5 119 aa5.34□□□□□ -1.55
UBR1-211ENST00000569971 DNAJA2O60884 412 aa5.34□□□□□ -1.55
UBR1-211ENST00000569971 CLSTN1O94985 981 aa5.34□□□□□ -1.55
UBR1-211ENST00000569971 IFRD2Q12894 506 aaPredicted RBP5.34□□□□□ -1.55
UBR1-211ENST00000569971 RASGRF1Q13972 1273 aa5.34□□□□□ -1.55
UBR1-211ENST00000569971 IFI16Q16666 785 aaKnown RBP5.34□□□□□ -1.55
UBR1-211ENST00000569971 KIF4BQ2VIQ3 1234 aa5.34□□□□□ -1.55
UBR1-211ENST00000569971 ZC3H12AQ5D1E8 599 aaKnown RBP5.34□□□□□ -1.55
UBR1-211ENST00000569971 C6orf15Q6UXA7 325 aaPredicted RBP5.34□□□□□ -1.55
UBR1-211ENST00000569971 SPRED2Q7Z698 418 aa5.34□□□□□ -1.55
UBR1-211ENST00000569971 ANKRD13AQ8IZ07 590 aa5.34□□□□□ -1.55
UBR1-211ENST00000569971 C19orf47Q8N9M1 422 aaKnown RBP5.34□□□□□ -1.55
UBR1-211ENST00000569971 SH3TC2Q8TF17 1288 aa5.34□□□□□ -1.55
UBR1-211ENST00000569971 ATG4CQ96DT6 458 aa5.34□□□□□ -1.55
UBR1-211ENST00000569971 TM9SF2Q99805 663 aa5.34□□□□□ -1.55
UBR1-211ENST00000569971 MEIS3P2A8K0S8 358 aa5.33□□□□□ -1.56
UBR1-211ENST00000569971 CHURC1-FNTBB4DL54 471 aa5.33□□□□□ -1.56
UBR1-211ENST00000569971 ENPP3O14638 875 aa5.33□□□□□ -1.56
UBR1-211ENST00000569971 TMPRSS2O15393 492 aa5.33□□□□□ -1.56
UBR1-211ENST00000569971 DYNC1LI2O43237 492 aaPredicted RBP5.33□□□□□ -1.56
UBR1-211ENST00000569971 RNGTTO60942 597 aaKnown RBP5.33□□□□□ -1.56
UBR1-211ENST00000569971 CDK11BP21127 795 aaKnown RBP5.33□□□□□ -1.56
UBR1-211ENST00000569971 GUCY2CP25092 1073 aa5.33□□□□□ -1.56
UBR1-211ENST00000569971 GRK4P32298 578 aa5.33□□□□□ -1.56
UBR1-211ENST00000569971 MLECQ14165 292 aa5.33□□□□□ -1.56
UBR1-211ENST00000569971 ZYXQ15942 572 aaKnown RBP5.33□□□□□ -1.56
UBR1-211ENST00000569971 UNC5AQ6ZN44 842 aa5.33□□□□□ -1.56
UBR1-211ENST00000569971 ZNF574Q6ZN55 896 aaPredicted RBP5.33□□□□□ -1.56
UBR1-211ENST00000569971 FAM178BQ8IXR5 827 aa5.33□□□□□ -1.56
UBR1-211ENST00000569971 FAM168AQ92567 244 aa5.33□□□□□ -1.56
UBR1-211ENST00000569971 RC3H2Q9HBD1 1191 aaKnown RBP5.33□□□□□ -1.56
UBR1-211ENST00000569971 FANCLQ9NW38 375 aa5.33□□□□□ -1.56
UBR1-211ENST00000569971 GMIPQ9P107 970 aa5.33□□□□□ -1.56
UBR1-211ENST00000569971 TACC3Q9Y6A5 838 aa5.33□□□□□ -1.56
UBR1-211ENST00000569971 NACADO15069 1562 aa5.33□□□□□ -1.56
UBR1-211ENST00000569971 LTBP3Q9NS15 1303 aa5.32□□□□□ -1.56
UBR1-211ENST00000569971 ESYT3A0FGR9 886 aa5.32□□□□□ -1.56
UBR1-211ENST00000569971 PRAMEF27A3QJZ7 478 aa5.32□□□□□ -1.56
UBR1-211ENST00000569971 FAM86C2PA6NEL3 165 aa5.32□□□□□ -1.56
UBR1-211ENST00000569971 UPK3BL1B0FP48 263 aa5.32□□□□□ -1.56
UBR1-211ENST00000569971 UPK3BL2E5RIL1 263 aa5.32□□□□□ -1.56
UBR1-211ENST00000569971 PGRP06401 933 aa5.32□□□□□ -1.56
UBR1-211ENST00000569971 ACRP10323 421 aa5.32□□□□□ -1.56
UBR1-211ENST00000569971 NME1P15531 152 aaKnown RBP5.32□□□□□ -1.56
UBR1-211ENST00000569971 PDE4BQ07343 736 aa5.32□□□□□ -1.56
UBR1-211ENST00000569971 FBLN7Q53RD9 439 aa5.32□□□□□ -1.56
UBR1-211ENST00000569971 OVOS1Q6IE37 1185 aa5.32□□□□□ -1.56
UBR1-211ENST00000569971 ARHGAP27Q6ZUM4 889 aa5.32□□□□□ -1.56
UBR1-211ENST00000569971 CDC37L1Q7L3B6 337 aa5.32□□□□□ -1.56
UBR1-211ENST00000569971 FLAD1Q8NFF5 587 aa5.32□□□□□ -1.56
UBR1-211ENST00000569971 HRASLS5Q96KN8 279 aa5.32□□□□□ -1.56
UBR1-211ENST00000569971 SLC9A7Q96T83 725 aa5.32□□□□□ -1.56
UBR1-211ENST00000569971 KLHL3Q9UH77 587 aa5.32□□□□□ -1.56
UBR1-211ENST00000569971 PFDN2Q9UHV9 154 aa5.32□□□□□ -1.56
UBR1-211ENST00000569971 PPP1R9AQ9ULJ8 1098 aa5.32□□□□□ -1.56
UBR1-211ENST00000569971 PCDHB10Q9UN67 800 aa5.32□□□□□ -1.56
UBR1-211ENST00000569971 PCDHGC5Q9Y5F6 944 aa5.32□□□□□ -1.56
UBR1-211ENST00000569971 ABCC9O60706 1549 aa5.32□□□□□ -1.56
UBR1-211ENST00000569971 SCRIBQ14160 1630 aa5.31□□□□□ -1.56
UBR1-211ENST00000569971 TMEM265A0A087WTH1 108 aa5.31□□□□□ -1.56
UBR1-211ENST00000569971 DIAPH1O60610 1272 aaKnown RBP5.31□□□□□ -1.56
UBR1-211ENST00000569971 CEACAM5P06731 702 aa5.31□□□□□ -1.56
UBR1-211ENST00000569971 RNASE1P07998 156 aaKnown RBP5.31□□□□□ -1.56
UBR1-211ENST00000569971 FAM87AP0C7U9 286 aa5.31□□□□□ -1.56
UBR1-211ENST00000569971 CD8BP10966 210 aa5.31□□□□□ -1.56
UBR1-211ENST00000569971 ETF1P62495 437 aaKnown RBP5.31□□□□□ -1.56
UBR1-211ENST00000569971 SQSTM1Q13501 440 aa5.31□□□□□ -1.56
UBR1-211ENST00000569971 MTERF2Q49AM1 385 aa5.31□□□□□ -1.56
UBR1-211ENST00000569971 PLEKHG4Q58EX7 1191 aa5.31□□□□□ -1.56
UBR1-211ENST00000569971 ARSHQ5FYA8 562 aa5.31□□□□□ -1.56
UBR1-211ENST00000569971 PPM1JQ5JR12 505 aa5.31□□□□□ -1.56
UBR1-211ENST00000569971 TMEM201Q5SNT2 666 aa5.31□□□□□ -1.56
UBR1-211ENST00000569971 ZNF648Q5T619 568 aaPredicted RBP5.31□□□□□ -1.56
UBR1-211ENST00000569971 ANGEL2Q5VTE6 544 aaKnown RBP5.31□□□□□ -1.56
UBR1-211ENST00000569971 INTS3Q68E01 1043 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms