RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 PLCG1P19174 1290 aa8.72□□□□□ -1.01
CHD9-220ENST00000569794 YARSP54577 528 aaKnown RBP8.72□□□□□ -1.01
CHD9-220ENST00000569794 MEI1Q5TIA1 1274 aa8.72□□□□□ -1.01
CHD9-220ENST00000569794 TLR6Q9Y2C9 796 aa8.72□□□□□ -1.01
CHD9-220ENST00000569794 KCNA1Q09470 495 aa8.71□□□□□ -1.02
CHD9-220ENST00000569794 TMEM201Q5SNT2 666 aa8.71□□□□□ -1.02
CHD9-220ENST00000569794 DUSP9Q99956 384 aaKnown RBP8.71□□□□□ -1.02
CHD9-220ENST00000569794 ZNF552Q9H707 407 aaPredicted RBP8.71□□□□□ -1.02
CHD9-220ENST00000569794 PARD6AQ9NPB6 346 aa8.71□□□□□ -1.02
CHD9-220ENST00000569794 EBF1Q9UH73 591 aa8.71□□□□□ -1.02
CHD9-220ENST00000569794 CHRNEQ04844 493 aa8.7□□□□□ -1.02
CHD9-220ENST00000569794 SNX17Q15036 470 aa8.7□□□□□ -1.02
CHD9-220ENST00000569794 SPPL2CQ8IUH8 684 aa8.7□□□□□ -1.02
CHD9-220ENST00000569794 SYTL4Q96C24 671 aaPredicted RBP8.7□□□□□ -1.02
CHD9-220ENST00000569794 TEX51A0A1B0GUA7 166 aa8.69□□□□□ -1.02
CHD9-220ENST00000569794 RBM47A0AV96 593 aaKnown RBP8.69□□□□□ -1.02
CHD9-220ENST00000569794 TEKQ02763 1124 aa8.69□□□□□ -1.02
CHD9-220ENST00000569794 CCDC84Q86UT8 332 aaPredicted RBP8.69□□□□□ -1.02
CHD9-220ENST00000569794 SLFN12Q8IYM2 578 aa8.69□□□□□ -1.02
CHD9-220ENST00000569794 PHC3Q8NDX5 983 aa8.69□□□□□ -1.02
CHD9-220ENST00000569794 SHISA4Q96DD7 197 aa8.69□□□□□ -1.02
CHD9-220ENST00000569794 GCM1Q9NP62 436 aa8.69□□□□□ -1.02
CHD9-220ENST00000569794 GPR160Q9UJ42 338 aa8.69□□□□□ -1.02
CHD9-220ENST00000569794 CILPO75339 1184 aa8.68□□□□□ -1.02
CHD9-220ENST00000569794 PDE6BP35913 854 aa8.68□□□□□ -1.02
CHD9-220ENST00000569794 DUSP4Q13115 394 aa8.68□□□□□ -1.02
CHD9-220ENST00000569794 ANKS4BQ8N8V4 417 aa8.68□□□□□ -1.02
CHD9-220ENST00000569794 NOC4LQ9BVI4 516 aaKnown RBP8.68□□□□□ -1.02
CHD9-220ENST00000569794 CNOT6Q9ULM6 557 aaKnown RBP8.68□□□□□ -1.02
CHD9-220ENST00000569794 SHISA3A0PJX4 238 aa8.67□□□□□ -1.02
CHD9-220ENST00000569794 BMP7P18075 431 aa8.67□□□□□ -1.02
CHD9-220ENST00000569794 DIEXFQ68CQ4 756 aaKnown RBP8.67□□□□□ -1.02
CHD9-220ENST00000569794 TMEM132EQ6IEE7 984 aa8.67□□□□□ -1.02
CHD9-220ENST00000569794 BNC2Q6ZN30 1099 aaPredicted RBP8.67□□□□□ -1.02
CHD9-220ENST00000569794 LINC01599Q8WXQ3 324 aa8.67□□□□□ -1.02
CHD9-220ENST00000569794 KREMEN1Q96MU8 473 aa8.67□□□□□ -1.02
CHD9-220ENST00000569794 SGPP1Q9BX95 441 aa8.67□□□□□ -1.02
CHD9-220ENST00000569794 ASPNQ9BXN1 380 aa8.67□□□□□ -1.02
CHD9-220ENST00000569794 ZCCHC4Q9H5U6 513 aa8.67□□□□□ -1.02
CHD9-220ENST00000569794 TIMELESSQ9UNS1 1208 aa8.67□□□□□ -1.02
CHD9-220ENST00000569794 ZNF281Q9Y2X9 895 aa8.67□□□□□ -1.02
CHD9-220ENST00000569794 FAM221AA4D161 298 aa8.66□□□□□ -1.02
CHD9-220ENST00000569794 PSPNO60542 156 aa8.66□□□□□ -1.02
CHD9-220ENST00000569794 TNNI2P48788 182 aa8.66□□□□□ -1.02
CHD9-220ENST00000569794 ST13P50502 369 aaKnown RBP8.66□□□□□ -1.02
CHD9-220ENST00000569794 RELTQ969Z4 430 aa8.66□□□□□ -1.02
CHD9-220ENST00000569794 PRR36Q9H6K5 1346 aa8.65□□□□□ -1.02
CHD9-220ENST00000569794 NOTOA8MTQ0 251 aa8.65□□□□□ -1.02
CHD9-220ENST00000569794 BPNT1O95861 308 aa8.65□□□□□ -1.02
CHD9-220ENST00000569794 KCNC2Q96PR1 638 aa8.65□□□□□ -1.02
CHD9-220ENST00000569794 G6PC3Q9BUM1 346 aa8.65□□□□□ -1.02
CHD9-220ENST00000569794 KCTD3Q9Y597 815 aa8.65□□□□□ -1.02
CHD9-220ENST00000569794 GALK1P51570 392 aa8.64□□□□□ -1.03
CHD9-220ENST00000569794 TAF1CQ15572 869 aaPredicted RBP8.64□□□□□ -1.03
CHD9-220ENST00000569794 ZNF385BQ569K4 471 aa8.64□□□□□ -1.03
CHD9-220ENST00000569794 TCERG1LQ5VWI1 586 aa8.64□□□□□ -1.03
CHD9-220ENST00000569794 REV1Q9UBZ9 1251 aa8.64□□□□□ -1.03
CHD9-220ENST00000569794 A0A0G2JLL6 359 aaPredicted RBP8.63□□□□□ -1.03
CHD9-220ENST00000569794 EFEMP2O95967 443 aa8.63□□□□□ -1.03
CHD9-220ENST00000569794 SSPNQ14714 243 aa8.63□□□□□ -1.03
CHD9-220ENST00000569794 EAPPQ56P03 285 aaPredicted RBP8.63□□□□□ -1.03
CHD9-220ENST00000569794 GATAD2BQ8WXI9 593 aa8.63□□□□□ -1.03
CHD9-220ENST00000569794 CCDC74BQ96LY2 380 aa8.63□□□□□ -1.03
CHD9-220ENST00000569794 OR14I1A6ND48 311 aa8.62□□□□□ -1.03
CHD9-220ENST00000569794 CHURC1-FNTBB4DL54 471 aa8.62□□□□□ -1.03
CHD9-220ENST00000569794 RFXAPO00287 272 aa8.62□□□□□ -1.03
CHD9-220ENST00000569794 F13A1P00488 732 aa8.62□□□□□ -1.03
CHD9-220ENST00000569794 LMNB2Q03252 620 aa8.62□□□□□ -1.03
CHD9-220ENST00000569794 CAMK2GQ13555 558 aaPredicted RBP8.62□□□□□ -1.03
CHD9-220ENST00000569794 CLEC16AQ2KHT3 1053 aa8.62□□□□□ -1.03
CHD9-220ENST00000569794 NLRX1Q86UT6 975 aa8.62□□□□□ -1.03
CHD9-220ENST00000569794 MARCH10Q8NA82 808 aaPredicted RBP8.62□□□□□ -1.03
CHD9-220ENST00000569794 KLHL3Q9UH77 587 aa8.62□□□□□ -1.03
CHD9-220ENST00000569794 F6X3S4 739 aa8.61□□□□□ -1.03
CHD9-220ENST00000569794 VWCEQ96DN2 955 aa8.61□□□□□ -1.03
CHD9-220ENST00000569794 PARP2Q9UGN5 583 aa8.61□□□□□ -1.03
CHD9-220ENST00000569794 FOXD2O60548 495 aaPredicted RBP8.6□□□□□ -1.03
CHD9-220ENST00000569794 TRIM13O60858 407 aa8.6□□□□□ -1.03
CHD9-220ENST00000569794 HTR3BO95264 441 aa8.6□□□□□ -1.03
CHD9-220ENST00000569794 PF4P02776 101 aa8.6□□□□□ -1.03
CHD9-220ENST00000569794 CTSHP09668 335 aa8.6□□□□□ -1.03
CHD9-220ENST00000569794 ADGRF1Q5T601 910 aa8.6□□□□□ -1.03
CHD9-220ENST00000569794 RNF111Q6ZNA4 994 aa8.6□□□□□ -1.03
CHD9-220ENST00000569794 TMEM151BQ8IW70 566 aa8.6□□□□□ -1.03
CHD9-220ENST00000569794 SIRT2Q8IXJ6 389 aa8.6□□□□□ -1.03
CHD9-220ENST00000569794 POLR3KQ9Y2Y1 108 aaPredicted RBP8.6□□□□□ -1.03
CHD9-220ENST00000569794 USP31Q70CQ4 1352 aa8.6□□□□□ -1.03
CHD9-220ENST00000569794 ANKRD33BA6NCL7 494 aa8.59□□□□□ -1.03
CHD9-220ENST00000569794 HRKO00198 91 aa8.59□□□□□ -1.03
CHD9-220ENST00000569794 DNAJA2O60884 412 aa8.59□□□□□ -1.03
CHD9-220ENST00000569794 DAB2P98082 770 aa8.59□□□□□ -1.03
CHD9-220ENST00000569794 NMIQ13287 307 aaPredicted RBP8.59□□□□□ -1.03
CHD9-220ENST00000569794 PHACTR4Q8IZ21 702 aa8.59□□□□□ -1.03
CHD9-220ENST00000569794 ENOX1Q8TC92 643 aaKnown RBP8.59□□□□□ -1.03
CHD9-220ENST00000569794 SYTL5Q8TDW5 730 aaPredicted RBP8.59□□□□□ -1.03
CHD9-220ENST00000569794 RHOVQ96L33 236 aa8.59□□□□□ -1.03
CHD9-220ENST00000569794 KIF2CQ99661 725 aa8.59□□□□□ -1.03
CHD9-220ENST00000569794 HDAC8Q9BY41 377 aa8.59□□□□□ -1.03
CHD9-220ENST00000569794 MBD1Q9UIS9 605 aaPredicted RBP8.59□□□□□ -1.03
CHD9-220ENST00000569794 GRIN3BO60391 1043 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms