RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 AATFQ9NY61 560 aaKnown RBP eCLIP6.21□□□□□ -1.42
SF3B3-213ENST00000569687 KIAA1468Q9P260 1216 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 ATP6V0A2Q9Y487 856 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 QSER1Q2KHR3 1735 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 A0A1B0GUL6 1792 aa6.21□□□□□ -1.42
SF3B3-213ENST00000569687 CYP2D7A0A087X1C5 515 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 A0A1B0GVL5 298 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 SPDYE5A6NIY4 337 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 BTBD18B2RXH4 712 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 SMIM22K7EJ46 135 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 AP5Z1O43299 807 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 ZNF202O95125 648 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 XBP1P17861 261 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 PTPREP23469 700 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 SMARCA1P28370 1054 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 ALDH1B1P30837 517 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 NOVP48745 357 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 GNAQP50148 359 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 TERF1P54274 439 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 AKAP17AQ02040 695 aaKnown RBP6.2□□□□□ -1.42
SF3B3-213ENST00000569687 STX1AQ16623 288 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 RESP18Q5W5W9 173 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 RCSD1Q6JBY9 416 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 TMTC3Q6ZXV5 915 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.2□□□□□ -1.42
SF3B3-213ENST00000569687 DEFB132Q7Z7B7 95 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 CCDC125Q86Z20 511 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 CCDC144CPQ8IYA2 1237 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 DIS3L2Q8IYB7 885 aaKnown RBP6.2□□□□□ -1.42
SF3B3-213ENST00000569687 RETREG2Q8NC44 543 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 NUP133Q8WUM0 1156 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 SDF4Q9BRK5 362 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 PHF20Q9BVI0 1012 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 MRIQ9BWK5 157 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 RTFDC1Q9BY42 306 aaPredicted RBP6.2□□□□□ -1.42
SF3B3-213ENST00000569687 NAT10Q9H0A0 1025 aaKnown RBP6.2□□□□□ -1.42
SF3B3-213ENST00000569687 ZNF287Q9HBT7 754 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 STK32BQ9NY57 414 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 POLLQ9UGP5 575 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 TUBE1Q9UJT0 475 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 V9GY48 417 aaPredicted RBP6.2□□□□□ -1.42
SF3B3-213ENST00000569687 CASZ1Q86V15 1759 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 MROH7-TTC4A0A0A0MT08 1334 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 GAKO14976 1311 aa6.2□□□□□ -1.42
SF3B3-213ENST00000569687 TAF1P21675 1872 aa6.19□□□□□ -1.42
SF3B3-213ENST00000569687 ROBO3Q96MS0 1386 aa6.19□□□□□ -1.42
SF3B3-213ENST00000569687 NRXN2Q9P2S2 1712 aa6.19□□□□□ -1.42
SF3B3-213ENST00000569687 C19orf67A6NJJ6 358 aa6.19□□□□□ -1.42
SF3B3-213ENST00000569687 GALR2O43603 387 aaPredicted RBP6.19□□□□□ -1.42
SF3B3-213ENST00000569687 UFL1O94874 794 aa6.19□□□□□ -1.42
SF3B3-213ENST00000569687 BMP15O95972 392 aa6.19□□□□□ -1.42
SF3B3-213ENST00000569687 USP17L8P0C7I0 530 aa6.19□□□□□ -1.42
SF3B3-213ENST00000569687 SRGNP10124 158 aa6.19□□□□□ -1.42
SF3B3-213ENST00000569687 CYP2D6P10635 497 aa6.19□□□□□ -1.42
SF3B3-213ENST00000569687 NPR1P16066 1061 aa6.19□□□□□ -1.42
SF3B3-213ENST00000569687 PFKFB1P16118 471 aa6.19□□□□□ -1.42
SF3B3-213ENST00000569687 MSNP26038 577 aaKnown RBP6.19□□□□□ -1.42
SF3B3-213ENST00000569687 CDC25BP30305 580 aa6.19□□□□□ -1.42
SF3B3-213ENST00000569687 KIF5BP33176 963 aa6.19□□□□□ -1.42
SF3B3-213ENST00000569687 PDE6BP35913 854 aa6.19□□□□□ -1.42
SF3B3-213ENST00000569687 TRAPPC10P48553 1259 aa6.19□□□□□ -1.42
SF3B3-213ENST00000569687 NLRP12P59046 1061 aa6.19□□□□□ -1.42
SF3B3-213ENST00000569687 TFAP4Q01664 338 aa6.19□□□□□ -1.42
SF3B3-213ENST00000569687 GRIK5Q16478 980 aa6.19□□□□□ -1.42
SF3B3-213ENST00000569687 SHC4Q6S5L8 630 aa6.19□□□□□ -1.42
SF3B3-213ENST00000569687 PLA2G4DQ86XP0 818 aa6.19□□□□□ -1.42
SF3B3-213ENST00000569687 AMOTL1Q8IY63 956 aa6.19□□□□□ -1.42
SF3B3-213ENST00000569687 SRBD1Q8N5C6 995 aaKnown RBP6.19□□□□□ -1.42
SF3B3-213ENST00000569687 SH3RF3Q8TEJ3 882 aaPredicted RBP6.19□□□□□ -1.42
SF3B3-213ENST00000569687 NLRP7Q8WX94 980 aa6.19□□□□□ -1.42
SF3B3-213ENST00000569687 TNFRSF25Q93038 417 aa6.19□□□□□ -1.42
SF3B3-213ENST00000569687 LZTS2Q9BRK4 669 aa6.19□□□□□ -1.42
SF3B3-213ENST00000569687 COA1Q9GZY4 146 aa6.19□□□□□ -1.42
SF3B3-213ENST00000569687 SH3GLB2Q9NR46 395 aa6.19□□□□□ -1.42
SF3B3-213ENST00000569687 IL17RBQ9NRM6 502 aa6.19□□□□□ -1.42
SF3B3-213ENST00000569687 MCM9Q9NXL9 1143 aa6.19□□□□□ -1.42
SF3B3-213ENST00000569687 CEP131Q9UPN4 1083 aa6.19□□□□□ -1.42
SF3B3-213ENST00000569687 SRPRBQ9Y5M8 271 aaKnown RBP6.19□□□□□ -1.42
SF3B3-213ENST00000569687 PALM3A6NDB9 673 aaPredicted RBP6.18□□□□□ -1.42
SF3B3-213ENST00000569687 GOLGA6L6A8MZA4 724 aa6.18□□□□□ -1.42
SF3B3-213ENST00000569687 UBE2Q2LH0YL09 131 aa6.18□□□□□ -1.42
SF3B3-213ENST00000569687 MAP3K7O43318 606 aa6.18□□□□□ -1.42
SF3B3-213ENST00000569687 MYO1BO43795 1136 aa6.18□□□□□ -1.42
SF3B3-213ENST00000569687 PRDM1O75626 825 aa6.18□□□□□ -1.42
SF3B3-213ENST00000569687 PTMAP06454 111 aaKnown RBP6.18□□□□□ -1.42
SF3B3-213ENST00000569687 MMP10P09238 476 aa6.18□□□□□ -1.42
SF3B3-213ENST00000569687 MARCKSP29966 332 aaPredicted RBP6.18□□□□□ -1.42
SF3B3-213ENST00000569687 KRT2P35908 639 aa6.18□□□□□ -1.42
SF3B3-213ENST00000569687 SYKP43405 635 aa6.18□□□□□ -1.42
SF3B3-213ENST00000569687 USP5P45974 858 aa6.18□□□□□ -1.42
SF3B3-213ENST00000569687 ZNF75DP51815 510 aa6.18□□□□□ -1.42
SF3B3-213ENST00000569687 ATN1P54259 1190 aaPredicted RBP6.18□□□□□ -1.42
SF3B3-213ENST00000569687 RHBDL3P58872 404 aa6.18□□□□□ -1.42
SF3B3-213ENST00000569687 FKBP1AP62942 108 aaKnown RBP6.18□□□□□ -1.42
SF3B3-213ENST00000569687 GNL2Q13823 731 aaKnown RBP6.18□□□□□ -1.42
SF3B3-213ENST00000569687 GRM4Q14833 912 aa6.18□□□□□ -1.42
SF3B3-213ENST00000569687 NPY5RQ15761 445 aa6.18□□□□□ -1.42
SF3B3-213ENST00000569687 PFKFB3Q16875 520 aaPredicted RBP6.18□□□□□ -1.42
SF3B3-213ENST00000569687 CT47A1Q5JQC4 288 aaPredicted RBP6.18□□□□□ -1.42
SF3B3-213ENST00000569687 GALNT17Q6IS24 598 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms