RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 PARP14Q460N5 1801 aa16.42■□□□□ 0.22
HERPUD1-218ENST00000569569 NEFLP07196 543 aa16.42■□□□□ 0.22
HERPUD1-218ENST00000569569 ATP2B2Q01814 1243 aa16.42■□□□□ 0.22
HERPUD1-218ENST00000569569 LPAR1Q92633 364 aa16.42■□□□□ 0.22
HERPUD1-218ENST00000569569 RPAP3Q9H6T3 665 aaPredicted RBP16.42■□□□□ 0.22
HERPUD1-218ENST00000569569 VCPKMTQ9H867 229 aa16.42■□□□□ 0.22
HERPUD1-218ENST00000569569 MORF4L1Q9UBU8 362 aa16.42■□□□□ 0.22
HERPUD1-218ENST00000569569 SRRDQ9UH36 339 aa16.42■□□□□ 0.22
HERPUD1-218ENST00000569569 TSPY3P0CV98 308 aa16.41■□□□□ 0.22
HERPUD1-218ENST00000569569 TSPY8P0CW00 308 aa16.41■□□□□ 0.22
HERPUD1-218ENST00000569569 CTDSPL2Q05D32 466 aa16.41■□□□□ 0.22
HERPUD1-218ENST00000569569 NEDD1Q8NHV4 660 aa16.41■□□□□ 0.22
HERPUD1-218ENST00000569569 NYAP2Q9P242 653 aa16.41■□□□□ 0.22
HERPUD1-218ENST00000569569 KIAA0100Q14667 2235 aaKnown RBP16.4■□□□□ 0.22
HERPUD1-218ENST00000569569 IGKV6D-41A0A0C4DH26 115 aa16.4■□□□□ 0.22
HERPUD1-218ENST00000569569 TFAP4Q01664 338 aa16.4■□□□□ 0.22
HERPUD1-218ENST00000569569 COG2Q14746 738 aa16.4■□□□□ 0.22
HERPUD1-218ENST00000569569 KIAA1755Q5JYT7 1200 aa16.4■□□□□ 0.22
HERPUD1-218ENST00000569569 GPRC5AQ8NFJ5 357 aa16.4■□□□□ 0.22
HERPUD1-218ENST00000569569 CCDC136Q96JN2 1154 aa16.4■□□□□ 0.22
HERPUD1-218ENST00000569569 GOPCQ9HD26 462 aa16.4■□□□□ 0.22
HERPUD1-218ENST00000569569 HOXC10Q9NYD6 342 aa16.4■□□□□ 0.22
HERPUD1-218ENST00000569569 RBPJLQ9UBG7 517 aa16.4■□□□□ 0.22
HERPUD1-218ENST00000569569 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.4■□□□□ 0.22
HERPUD1-218ENST00000569569 PTCH2Q9Y6C5 1203 aa16.4■□□□□ 0.22
HERPUD1-218ENST00000569569 MYPNQ86TC9 1320 aa16.4■□□□□ 0.22
HERPUD1-218ENST00000569569 LAMA4Q16363 1823 aa16.4■□□□□ 0.22
HERPUD1-218ENST00000569569 TNPO2O14787 897 aaKnown RBP16.39■□□□□ 0.21
HERPUD1-218ENST00000569569 WDR46O15213 610 aaKnown RBP16.39■□□□□ 0.21
HERPUD1-218ENST00000569569 CENPBP07199 599 aaPredicted RBP16.39■□□□□ 0.21
HERPUD1-218ENST00000569569 FGRP09769 529 aa16.39■□□□□ 0.21
HERPUD1-218ENST00000569569 FAM47AQ5JRC9 791 aa16.39■□□□□ 0.21
HERPUD1-218ENST00000569569 LBX2Q6XYB7 198 aa16.39■□□□□ 0.21
HERPUD1-218ENST00000569569 NBPF11Q86T75 865 aa16.39■□□□□ 0.21
HERPUD1-218ENST00000569569 SPICE1Q8N0Z3 855 aa16.39■□□□□ 0.21
HERPUD1-218ENST00000569569 RUFY2Q8WXA3 655 aa16.39■□□□□ 0.21
HERPUD1-218ENST00000569569 MKL1Q969V6 931 aa16.39■□□□□ 0.21
HERPUD1-218ENST00000569569 COA7Q96BR5 231 aa16.39■□□□□ 0.21
HERPUD1-218ENST00000569569 CEP95Q96GE4 821 aa16.39■□□□□ 0.21
HERPUD1-218ENST00000569569 DSCC1Q9BVC3 393 aa16.39■□□□□ 0.21
HERPUD1-218ENST00000569569 TXNRD2Q9NNW7 524 aa16.39■□□□□ 0.21
HERPUD1-218ENST00000569569 INCENPQ9NQS7 918 aa16.39■□□□□ 0.21
HERPUD1-218ENST00000569569 MTMR4Q9NYA4 1195 aa16.39■□□□□ 0.21
HERPUD1-218ENST00000569569 CLIP2Q9UDT6 1046 aa16.39■□□□□ 0.21
HERPUD1-218ENST00000569569 RABGAP1Q9Y3P9 1069 aa16.39■□□□□ 0.21
HERPUD1-218ENST00000569569 COL11A1P12107 1806 aaPredicted RBP16.39■□□□□ 0.21
HERPUD1-218ENST00000569569 PLIN4Q96Q06 1357 aa16.38■□□□□ 0.21
HERPUD1-218ENST00000569569 TSPY2A6NKD2 308 aa16.38■□□□□ 0.21
HERPUD1-218ENST00000569569 ORC4O43929 436 aa16.38■□□□□ 0.21
HERPUD1-218ENST00000569569 TTLL1O95922 423 aa16.38■□□□□ 0.21
HERPUD1-218ENST00000569569 ERVK-9P63128 1117 aa16.38■□□□□ 0.21
HERPUD1-218ENST00000569569 ERVK-24P63145 666 aa16.38■□□□□ 0.21
HERPUD1-218ENST00000569569 Q3C1V9 767 aa16.38■□□□□ 0.21
HERPUD1-218ENST00000569569 RAET1EQ8TD07 263 aa16.38■□□□□ 0.21
HERPUD1-218ENST00000569569 PAGR1Q9BTK6 254 aa16.38■□□□□ 0.21
HERPUD1-218ENST00000569569 TANGO6Q9C0B7 1094 aa16.38■□□□□ 0.21
HERPUD1-218ENST00000569569 CENPFP49454 3210 aa16.38■□□□□ 0.21
HERPUD1-218ENST00000569569 HTTP42858 3142 aa16.38■□□□□ 0.21
HERPUD1-218ENST00000569569 ZNFX1Q9P2E3 1918 aaKnown RBP16.37■□□□□ 0.21
HERPUD1-218ENST00000569569 SPDYE16A6NNV3 312 aaPredicted RBP16.37■□□□□ 0.21
HERPUD1-218ENST00000569569 ZNF213O14771 459 aa16.37■□□□□ 0.21
HERPUD1-218ENST00000569569 RAD21O60216 631 aa16.37■□□□□ 0.21
HERPUD1-218ENST00000569569 PEX10O60683 326 aa16.37■□□□□ 0.21
HERPUD1-218ENST00000569569 CHMLP26374 656 aa16.37■□□□□ 0.21
HERPUD1-218ENST00000569569 HAND2P61296 217 aa16.37■□□□□ 0.21
HERPUD1-218ENST00000569569 PRKCZQ05513 592 aa16.37■□□□□ 0.21
HERPUD1-218ENST00000569569 SLC9C1Q4G0N8 1177 aa16.37■□□□□ 0.21
HERPUD1-218ENST00000569569 PPP4R3BQ5MIZ7 849 aa16.37■□□□□ 0.21
HERPUD1-218ENST00000569569 POTEEQ6S8J3 1075 aa16.37■□□□□ 0.21
HERPUD1-218ENST00000569569 ARMC5Q96C12 935 aa16.37■□□□□ 0.21
HERPUD1-218ENST00000569569 SYNPO2Q9UMS6 1093 aa16.37■□□□□ 0.21
HERPUD1-218ENST00000569569 GABRQQ9UN88 632 aa16.37■□□□□ 0.21
HERPUD1-218ENST00000569569 TACC3Q9Y6A5 838 aa16.37■□□□□ 0.21
HERPUD1-218ENST00000569569 PLXNB2O15031 1838 aa16.37■□□□□ 0.21
HERPUD1-218ENST00000569569 RAD50Q92878 1312 aa16.37■□□□□ 0.21
HERPUD1-218ENST00000569569 F5H6K3 240 aa16.36■□□□□ 0.21
HERPUD1-218ENST00000569569 RANBP6O60518 1105 aaKnown RBP16.36■□□□□ 0.21
HERPUD1-218ENST00000569569 FLOT1O75955 427 aa16.36■□□□□ 0.21
HERPUD1-218ENST00000569569 PCP11498 1178 aaKnown RBP16.36■□□□□ 0.21
HERPUD1-218ENST00000569569 DSG3P32926 999 aa16.36■□□□□ 0.21
HERPUD1-218ENST00000569569 FLT3LGP49771 235 aa16.36■□□□□ 0.21
HERPUD1-218ENST00000569569 CCNA1P78396 465 aa16.36■□□□□ 0.21
HERPUD1-218ENST00000569569 KLRC3Q07444 240 aa16.36■□□□□ 0.21
HERPUD1-218ENST00000569569 AKNAD1Q5T1N1 836 aa16.36■□□□□ 0.21
HERPUD1-218ENST00000569569 MFSD6Q6ZSS7 791 aa16.36■□□□□ 0.21
HERPUD1-218ENST00000569569 CCAR1Q8IX12 1150 aaKnown RBP16.36■□□□□ 0.21
HERPUD1-218ENST00000569569 TOMM22Q9NS69 142 aa16.36■□□□□ 0.21
HERPUD1-218ENST00000569569 CTNNA3Q9UI47 895 aa16.36■□□□□ 0.21
HERPUD1-218ENST00000569569 CNMDO75829 334 aa16.35■□□□□ 0.21
HERPUD1-218ENST00000569569 MAPK4P31152 587 aa16.35■□□□□ 0.21
HERPUD1-218ENST00000569569 IRF5Q13568 498 aa16.35■□□□□ 0.21
HERPUD1-218ENST00000569569 RRP12Q5JTH9 1297 aaKnown RBP16.35■□□□□ 0.21
HERPUD1-218ENST00000569569 MB21D1Q8N884 522 aa16.35■□□□□ 0.21
HERPUD1-218ENST00000569569 STAG1Q8WVM7 1258 aa16.35■□□□□ 0.21
HERPUD1-218ENST00000569569 IL25Q9H293 177 aa16.35■□□□□ 0.21
HERPUD1-218ENST00000569569 RNF41Q9H4P4 317 aaPredicted RBP16.35■□□□□ 0.21
HERPUD1-218ENST00000569569 BTBD7Q9P203 1132 aa16.35■□□□□ 0.21
HERPUD1-218ENST00000569569 A0A0G2JMZ2 1700 aa16.35■□□□□ 0.21
HERPUD1-218ENST00000569569 RBBP6Q7Z6E9 1792 aaKnown RBP16.34■□□□□ 0.21
HERPUD1-218ENST00000569569 NDUFB10O96000 172 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms