RNA–Protein interactions for RNA: ENST00000569455.1

CDH13-214, Transcript of cadherin 13, humanhuman

TSL 3

Gene CDH13, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-214ENST00000569455 STX8Q9UNK0 236 aa8.88□□□□□ -0.99
CDH13-214ENST00000569455 PPP2R3BQ9Y5P8 575 aa8.88□□□□□ -0.99
CDH13-214ENST00000569455 GREB1LQ9C091 1923 aaPredicted RBP8.88□□□□□ -0.99
CDH13-214ENST00000569455 MYH4Q9Y623 1939 aa8.88□□□□□ -0.99
CDH13-214ENST00000569455 CLRN2A0PK11 232 aa8.87□□□□□ -0.99
CDH13-214ENST00000569455 DDTLA6NHG4 134 aaPredicted RBP8.87□□□□□ -0.99
CDH13-214ENST00000569455 TCP10L2B9ZVM9 353 aa8.87□□□□□ -0.99
CDH13-214ENST00000569455 NMT2O60551 498 aa8.87□□□□□ -0.99
CDH13-214ENST00000569455 FMNL1O95466 1100 aaPredicted RBP8.87□□□□□ -0.99
CDH13-214ENST00000569455 TOP1P11387 765 aaKnown RBP8.87□□□□□ -0.99
CDH13-214ENST00000569455 FDPSP14324 419 aaKnown RBP8.87□□□□□ -0.99
CDH13-214ENST00000569455 SHMT1P34896 483 aa8.87□□□□□ -0.99
CDH13-214ENST00000569455 GNAQP50148 359 aa8.87□□□□□ -0.99
CDH13-214ENST00000569455 HIRAP54198 1017 aaPredicted RBP8.87□□□□□ -0.99
CDH13-214ENST00000569455 TROAPQ12815 778 aa8.87□□□□□ -0.99
CDH13-214ENST00000569455 TRIM29Q14134 588 aa8.87□□□□□ -0.99
CDH13-214ENST00000569455 NTRK3Q16288 839 aa8.87□□□□□ -0.99
CDH13-214ENST00000569455 CSPP1Q1MSJ5 1256 aa8.87□□□□□ -0.99
CDH13-214ENST00000569455 SKOR2Q2VWA4 1001 aaPredicted RBP8.87□□□□□ -0.99
CDH13-214ENST00000569455 TBC1D10BQ4KMP7 808 aaPredicted RBP8.87□□□□□ -0.99
CDH13-214ENST00000569455 RCSD1Q6JBY9 416 aa8.87□□□□□ -0.99
CDH13-214ENST00000569455 FAM83AQ86UY5 434 aa8.87□□□□□ -0.99
CDH13-214ENST00000569455 PNMA1Q8ND90 353 aa8.87□□□□□ -0.99
CDH13-214ENST00000569455 RNF26Q9BY78 433 aaPredicted RBP8.87□□□□□ -0.99
CDH13-214ENST00000569455 VEZTQ9HBM0 779 aa8.87□□□□□ -0.99
CDH13-214ENST00000569455 FAM217BQ9NTX9 383 aaPredicted RBP8.87□□□□□ -0.99
CDH13-214ENST00000569455 RBM27Q9P2N5 1060 aaKnown RBP8.87□□□□□ -0.99
CDH13-214ENST00000569455 HERC5Q9UII4 1024 aaKnown RBP8.87□□□□□ -0.99
CDH13-214ENST00000569455 CLEC11AQ9Y240 323 aa8.87□□□□□ -0.99
CDH13-214ENST00000569455 TRPM7Q96QT4 1865 aa8.86□□□□□ -0.99
CDH13-214ENST00000569455 MPHOSPH10O00566 681 aaKnown RBP8.86□□□□□ -0.99
CDH13-214ENST00000569455 DEXIO95424 95 aa8.86□□□□□ -0.99
CDH13-214ENST00000569455 ITGBL1O95965 494 aaPredicted RBP8.86□□□□□ -0.99
CDH13-214ENST00000569455 AKR1B1P15121 316 aa8.86□□□□□ -0.99
CDH13-214ENST00000569455 XBP1P17861 261 aa8.86□□□□□ -0.99
CDH13-214ENST00000569455 GRM4Q14833 912 aa8.86□□□□□ -0.99
CDH13-214ENST00000569455 CERKLQ49MI3 558 aaPredicted RBP8.86□□□□□ -0.99
CDH13-214ENST00000569455 MCTP1Q6DN14 999 aa8.86□□□□□ -0.99
CDH13-214ENST00000569455 TMTC3Q6ZXV5 915 aa8.86□□□□□ -0.99
CDH13-214ENST00000569455 SULF1Q8IWU6 871 aa8.86□□□□□ -0.99
CDH13-214ENST00000569455 ZFPM1Q8IX07 1006 aa8.86□□□□□ -0.99
CDH13-214ENST00000569455 TRPM4Q8TD43 1214 aa8.86□□□□□ -0.99
CDH13-214ENST00000569455 HOOK2Q96ED9 719 aa8.86□□□□□ -0.99
CDH13-214ENST00000569455 CEP95Q96GE4 821 aa8.86□□□□□ -0.99
CDH13-214ENST00000569455 CSRNP1Q96S65 589 aa8.86□□□□□ -0.99
CDH13-214ENST00000569455 TMEM47Q9BQJ4 181 aa8.86□□□□□ -0.99
CDH13-214ENST00000569455 LZTS2Q9BRK4 669 aa8.86□□□□□ -0.99
CDH13-214ENST00000569455 ALG1Q9BT22 464 aa8.86□□□□□ -0.99
CDH13-214ENST00000569455 SLC26A6Q9BXS9 759 aa8.86□□□□□ -0.99
CDH13-214ENST00000569455 IGKV6D-41A0A0C4DH26 115 aa8.85□□□□□ -0.99
CDH13-214ENST00000569455 UNCXA6NJT0 531 aa8.85□□□□□ -0.99
CDH13-214ENST00000569455 PRPF3O43395 683 aaKnown RBP8.85□□□□□ -0.99
CDH13-214ENST00000569455 DTNBO60941 627 aa8.85□□□□□ -0.99
CDH13-214ENST00000569455 TTLL1O95922 423 aa8.85□□□□□ -0.99
CDH13-214ENST00000569455 NCLP19338 710 aaKnown RBP8.85□□□□□ -0.99
CDH13-214ENST00000569455 NOVP48745 357 aa8.85□□□□□ -0.99
CDH13-214ENST00000569455 KRT85P78386 507 aa8.85□□□□□ -0.99
CDH13-214ENST00000569455 NBPF9Q3BBW0 867 aa8.85□□□□□ -0.99
CDH13-214ENST00000569455 RBM26Q5T8P6 1007 aaKnown RBP8.85□□□□□ -0.99
CDH13-214ENST00000569455 TATDN1Q6P1N9 297 aa8.85□□□□□ -0.99
CDH13-214ENST00000569455 SH3BP5LQ7L8J4 393 aa8.85□□□□□ -0.99
CDH13-214ENST00000569455 METTL16Q86W50 562 aaKnown RBP8.85□□□□□ -0.99
CDH13-214ENST00000569455 FBXO18Q8NFZ0 1043 aa8.85□□□□□ -0.99
CDH13-214ENST00000569455 PHKBQ93100 1093 aa8.85□□□□□ -0.99
CDH13-214ENST00000569455 KANSL2Q9H9L4 492 aa8.85□□□□□ -0.99
CDH13-214ENST00000569455 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.85□□□□□ -0.99
CDH13-214ENST00000569455 CABP5Q9NP86 173 aa8.85□□□□□ -0.99
CDH13-214ENST00000569455 MTMR4Q9NYA4 1195 aa8.85□□□□□ -0.99
CDH13-214ENST00000569455 ABT1Q9ULW3 272 aaKnown RBP8.85□□□□□ -0.99
CDH13-214ENST00000569455 SHTN1A0MZ66 631 aa8.84□□□□□ -0.99
CDH13-214ENST00000569455 TBC1D12O60347 775 aa8.84□□□□□ -0.99
CDH13-214ENST00000569455 PPFIA3O75145 1194 aa8.84□□□□□ -0.99
CDH13-214ENST00000569455 EGFRP00533 1210 aa8.84□□□□□ -0.99
CDH13-214ENST00000569455 PARP1P09874 1014 aaKnown RBP8.84□□□□□ -0.99
CDH13-214ENST00000569455 ECE1P42892 770 aa8.84□□□□□ -0.99
CDH13-214ENST00000569455 FOSBP53539 338 aa8.84□□□□□ -0.99
CDH13-214ENST00000569455 FKBP1BP68106 108 aa8.84□□□□□ -0.99
CDH13-214ENST00000569455 RESTQ13127 1097 aa8.84□□□□□ -0.99
CDH13-214ENST00000569455 GNL2Q13823 731 aaKnown RBP8.84□□□□□ -0.99
CDH13-214ENST00000569455 SAFBQ15424 915 aaKnown RBP eCLIP8.84□□□□□ -0.99
CDH13-214ENST00000569455 ABCB5Q2M3G0 1257 aa8.84□□□□□ -0.99
CDH13-214ENST00000569455 SUPT20HL1Q3ZLR7 823 aa8.84□□□□□ -0.99
CDH13-214ENST00000569455 ANGEL2Q5VTE6 544 aaKnown RBP8.84□□□□□ -0.99
CDH13-214ENST00000569455 ATL3Q6DD88 541 aa8.84□□□□□ -0.99
CDH13-214ENST00000569455 TMEM179Q6ZVK1 233 aa8.84□□□□□ -0.99
CDH13-214ENST00000569455 KRT26Q7Z3Y9 468 aa8.84□□□□□ -0.99
CDH13-214ENST00000569455 BRAPQ7Z569 592 aa8.84□□□□□ -0.99
CDH13-214ENST00000569455 NBPF11Q86T75 865 aa8.84□□□□□ -0.99
CDH13-214ENST00000569455 FERMT3Q86UX7 667 aa8.84□□□□□ -0.99
CDH13-214ENST00000569455 ZNF396Q96N95 335 aaPredicted RBP8.84□□□□□ -0.99
CDH13-214ENST00000569455 DNAJC18Q9H819 358 aa8.84□□□□□ -0.99
CDH13-214ENST00000569455 GGA3Q9NZ52 723 aa8.84□□□□□ -0.99
CDH13-214ENST00000569455 CFAP45Q9UL16 551 aa8.84□□□□□ -0.99
CDH13-214ENST00000569455 CNTNAP5Q8WYK1 1306 aa8.83□□□□□ -1
CDH13-214ENST00000569455 PALM3A6NDB9 673 aaPredicted RBP8.83□□□□□ -1
CDH13-214ENST00000569455 CA12O43570 354 aa8.83□□□□□ -1
CDH13-214ENST00000569455 TRAK2O60296 914 aa8.83□□□□□ -1
CDH13-214ENST00000569455 PRPF40AO75400 957 aaKnown RBP8.83□□□□□ -1
CDH13-214ENST00000569455 PLEKHA8P1O95397 391 aa8.83□□□□□ -1
CDH13-214ENST00000569455 MBD3O95983 291 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms