RNA–Protein interactions for RNA: ENST00000569278.1

CHRFAM7A-206, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 3

Gene CHRFAM7A, Length 464 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-206ENST00000569278 FRAT1Q92837 279 aaPredicted RBP13.63□□□□□ -0.23
CHRFAM7A-206ENST00000569278 PAGR1Q9BTK6 254 aa13.63□□□□□ -0.23
CHRFAM7A-206ENST00000569278 GINM1Q9NU53 330 aa13.63□□□□□ -0.23
CHRFAM7A-206ENST00000569278 BTBD7Q9P203 1132 aa13.63□□□□□ -0.23
CHRFAM7A-206ENST00000569278 DLL1O00548 723 aa13.62□□□□□ -0.23
CHRFAM7A-206ENST00000569278 VCAM1P19320 739 aa13.62□□□□□ -0.23
CHRFAM7A-206ENST00000569278 ZYXQ15942 572 aaKnown RBP13.62□□□□□ -0.23
CHRFAM7A-206ENST00000569278 PLEKHH3Q7Z736 793 aa13.62□□□□□ -0.23
CHRFAM7A-206ENST00000569278 CRACR2BQ8N4Y2 399 aaPredicted RBP13.62□□□□□ -0.23
CHRFAM7A-206ENST00000569278 DEFB123Q8N688 67 aa13.62□□□□□ -0.23
CHRFAM7A-206ENST00000569278 RIOK1Q9BRS2 568 aaKnown RBP13.62□□□□□ -0.23
CHRFAM7A-206ENST00000569278 EHD4Q9H223 541 aa13.62□□□□□ -0.23
CHRFAM7A-206ENST00000569278 MTMR10Q9NXD2 777 aa13.62□□□□□ -0.23
CHRFAM7A-206ENST00000569278 SPDYE16A6NNV3 312 aaPredicted RBP13.61□□□□□ -0.23
CHRFAM7A-206ENST00000569278 SEC24BO95487 1268 aa13.61□□□□□ -0.23
CHRFAM7A-206ENST00000569278 CYP7A1P22680 504 aa13.61□□□□□ -0.23
CHRFAM7A-206ENST00000569278 RGS2P41220 211 aa13.61□□□□□ -0.23
CHRFAM7A-206ENST00000569278 PLCD1P51178 756 aa13.61□□□□□ -0.23
CHRFAM7A-206ENST00000569278 GABPAQ06546 454 aa13.61□□□□□ -0.23
CHRFAM7A-206ENST00000569278 MAP2K5Q13163 448 aa13.61□□□□□ -0.23
CHRFAM7A-206ENST00000569278 GRB14Q14449 540 aa13.61□□□□□ -0.23
CHRFAM7A-206ENST00000569278 USP17L2Q6R6M4 530 aa13.61□□□□□ -0.23
CHRFAM7A-206ENST00000569278 LBX2Q6XYB7 198 aa13.61□□□□□ -0.23
CHRFAM7A-206ENST00000569278 NPLOC4Q8TAT6 608 aa13.61□□□□□ -0.23
CHRFAM7A-206ENST00000569278 BBXQ8WY36 941 aaPredicted RBP13.61□□□□□ -0.23
CHRFAM7A-206ENST00000569278 NOL10Q9BSC4 688 aaKnown RBP13.61□□□□□ -0.23
CHRFAM7A-206ENST00000569278 MFRPQ9BY79 579 aa13.61□□□□□ -0.23
CHRFAM7A-206ENST00000569278 CCDC8Q9H0W5 538 aaPredicted RBP13.61□□□□□ -0.23
CHRFAM7A-206ENST00000569278 A0A1W2PRG0 241 aa13.6□□□□□ -0.23
CHRFAM7A-206ENST00000569278 SURF6O75683 361 aaKnown RBP13.6□□□□□ -0.23
CHRFAM7A-206ENST00000569278 KIAA1755Q5JYT7 1200 aa13.6□□□□□ -0.23
CHRFAM7A-206ENST00000569278 CCDC158Q5M9N0 1113 aa13.6□□□□□ -0.23
CHRFAM7A-206ENST00000569278 CATSPERGQ6ZRH7 1159 aa13.6□□□□□ -0.23
CHRFAM7A-206ENST00000569278 MAGEB6Q8N7X4 407 aa13.6□□□□□ -0.23
CHRFAM7A-206ENST00000569278 GTF3C2Q8WUA4 911 aaPredicted RBP13.6□□□□□ -0.23
CHRFAM7A-206ENST00000569278 KIAA1683Q9H0B3 1180 aa13.6□□□□□ -0.23
CHRFAM7A-206ENST00000569278 CHMP4BQ9H444 224 aaKnown RBP13.6□□□□□ -0.23
CHRFAM7A-206ENST00000569278 OCEL1Q9H607 264 aa13.6□□□□□ -0.23
CHRFAM7A-206ENST00000569278 RABGAP1Q9Y3P9 1069 aa13.6□□□□□ -0.23
CHRFAM7A-206ENST00000569278 IPO8O15397 1037 aaKnown RBP13.59□□□□□ -0.23
CHRFAM7A-206ENST00000569278 IDH1O75874 414 aaKnown RBP13.59□□□□□ -0.23
CHRFAM7A-206ENST00000569278 HLA-DOAP06340 250 aa13.59□□□□□ -0.23
CHRFAM7A-206ENST00000569278 HOXC6P09630 235 aa13.59□□□□□ -0.23
CHRFAM7A-206ENST00000569278 IRX6P78412 446 aaPredicted RBP13.59□□□□□ -0.23
CHRFAM7A-206ENST00000569278 MDM2Q00987 491 aaPredicted RBP13.59□□□□□ -0.23
CHRFAM7A-206ENST00000569278 ZKSCAN2Q63HK3 967 aa13.59□□□□□ -0.23
CHRFAM7A-206ENST00000569278 GUCD1Q96NT3 240 aa13.59□□□□□ -0.23
CHRFAM7A-206ENST00000569278 UBE2OQ9C0C9 1292 aaKnown RBP13.59□□□□□ -0.23
CHRFAM7A-206ENST00000569278 SERPINB13Q9UIV8 391 aa13.59□□□□□ -0.23
CHRFAM7A-206ENST00000569278 STXBP5LQ9Y2K9 1186 aa13.59□□□□□ -0.23
CHRFAM7A-206ENST00000569278 COL11A1P12107 1806 aaPredicted RBP13.58□□□□□ -0.24
CHRFAM7A-206ENST00000569278 USP17L15C9J2P7 530 aa13.58□□□□□ -0.24
CHRFAM7A-206ENST00000569278 USP17L13C9JLJ4 530 aa13.58□□□□□ -0.24
CHRFAM7A-206ENST00000569278 USP17L11C9JVI0 530 aa13.58□□□□□ -0.24
CHRFAM7A-206ENST00000569278 USP17L18D6R9N7 530 aa13.58□□□□□ -0.24
CHRFAM7A-206ENST00000569278 USP17L22D6RA61 530 aa13.58□□□□□ -0.24
CHRFAM7A-206ENST00000569278 USP17L17D6RBQ6 530 aa13.58□□□□□ -0.24
CHRFAM7A-206ENST00000569278 USP17L19D6RCP7 530 aa13.58□□□□□ -0.24
CHRFAM7A-206ENST00000569278 USP17L20D6RJB6 530 aa13.58□□□□□ -0.24
CHRFAM7A-206ENST00000569278 SMIM22K7EJ46 135 aa13.58□□□□□ -0.24
CHRFAM7A-206ENST00000569278 IGSF3O75054 1194 aa13.58□□□□□ -0.24
CHRFAM7A-206ENST00000569278 CYBAP13498 195 aa13.58□□□□□ -0.24
CHRFAM7A-206ENST00000569278 PTPREP23469 700 aa13.58□□□□□ -0.24
CHRFAM7A-206ENST00000569278 USP17L24Q0WX57 530 aa13.58□□□□□ -0.24
CHRFAM7A-206ENST00000569278 CEP85Q6P2H3 762 aa13.58□□□□□ -0.24
CHRFAM7A-206ENST00000569278 TRMT44Q8IYL2 757 aaKnown RBP13.58□□□□□ -0.24
CHRFAM7A-206ENST00000569278 MYH8P13535 1937 aa13.57□□□□□ -0.24
CHRFAM7A-206ENST00000569278 BAZ2AQ9UIF9 1905 aaKnown RBP13.57□□□□□ -0.24
CHRFAM7A-206ENST00000569278 SLC15A5A6NIM6 579 aa13.57□□□□□ -0.24
CHRFAM7A-206ENST00000569278 CYP2C19P33261 490 aa13.57□□□□□ -0.24
CHRFAM7A-206ENST00000569278 OS9Q13438 667 aaPredicted RBP13.57□□□□□ -0.24
CHRFAM7A-206ENST00000569278 SEPT2Q15019 361 aa13.57□□□□□ -0.24
CHRFAM7A-206ENST00000569278 RAB3GAP1Q15042 981 aa13.57□□□□□ -0.24
CHRFAM7A-206ENST00000569278 CLEC10AQ8IUN9 316 aa13.57□□□□□ -0.24
CHRFAM7A-206ENST00000569278 PDCD7Q8N8D1 485 aaKnown RBP13.57□□□□□ -0.24
CHRFAM7A-206ENST00000569278 SLC44A5Q8NCS7 719 aa13.57□□□□□ -0.24
CHRFAM7A-206ENST00000569278 FBXO22Q8NEZ5 403 aa13.57□□□□□ -0.24
CHRFAM7A-206ENST00000569278 FEZ1Q99689 392 aa13.57□□□□□ -0.24
CHRFAM7A-206ENST00000569278 TRIM34Q9BYJ4 488 aa13.57□□□□□ -0.24
CHRFAM7A-206ENST00000569278 RPAP3Q9H6T3 665 aaPredicted RBP13.57□□□□□ -0.24
CHRFAM7A-206ENST00000569278 DDX20Q9UHI6 824 aaKnown RBP13.57□□□□□ -0.24
CHRFAM7A-206ENST00000569278 GREB1LQ9C091 1923 aaPredicted RBP13.56□□□□□ -0.24
CHRFAM7A-206ENST00000569278 TCRBV5S4A2TA0A5A2 114 aa13.56□□□□□ -0.24
CHRFAM7A-206ENST00000569278 POTEB2H3BUK9 544 aa13.56□□□□□ -0.24
CHRFAM7A-206ENST00000569278 CYP2D6P10635 497 aa13.56□□□□□ -0.24
CHRFAM7A-206ENST00000569278 USP5P45974 858 aa13.56□□□□□ -0.24
CHRFAM7A-206ENST00000569278 ABCB5Q2M3G0 1257 aa13.56□□□□□ -0.24
CHRFAM7A-206ENST00000569278 SLFNL1Q499Z3 407 aa13.56□□□□□ -0.24
CHRFAM7A-206ENST00000569278 CERKLQ49MI3 558 aaPredicted RBP13.56□□□□□ -0.24
CHRFAM7A-206ENST00000569278 SIAH1Q8IUQ4 282 aa13.56□□□□□ -0.24
CHRFAM7A-206ENST00000569278 EDC3Q96F86 508 aaKnown RBP13.56□□□□□ -0.24
CHRFAM7A-206ENST00000569278 EXOC6BQ9Y2D4 811 aa13.56□□□□□ -0.24
CHRFAM7A-206ENST00000569278 COBLO75128 1261 aa13.55□□□□□ -0.24
CHRFAM7A-206ENST00000569278 CHGBP05060 677 aa13.55□□□□□ -0.24
CHRFAM7A-206ENST00000569278 PDE6AP16499 860 aa13.55□□□□□ -0.24
CHRFAM7A-206ENST00000569278 B4GALNT3Q6L9W6 998 aa13.55□□□□□ -0.24
CHRFAM7A-206ENST00000569278 EXOC6Q8TAG9 804 aa13.55□□□□□ -0.24
CHRFAM7A-206ENST00000569278 LPAR1Q92633 364 aa13.55□□□□□ -0.24
CHRFAM7A-206ENST00000569278 MOV10L1Q9BXT6 1211 aaKnown RBP13.55□□□□□ -0.24
CHRFAM7A-206ENST00000569278 CHD9Q3L8U1 2897 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms