RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 SPICE1Q8N0Z3 855 aa17.22■□□□□ 0.35
COMMD4-225ENST00000569245 FAM227BQ96M60 508 aa17.22■□□□□ 0.35
COMMD4-225ENST00000569245 ZSWIM8A7E2V4 1837 aa17.21■□□□□ 0.35
COMMD4-225ENST00000569245 POTEFA5A3E0 1075 aa17.21■□□□□ 0.35
COMMD4-225ENST00000569245 ADCY3O60266 1144 aa17.21■□□□□ 0.35
COMMD4-225ENST00000569245 RASA1P20936 1047 aa17.21■□□□□ 0.35
COMMD4-225ENST00000569245 ERVK-9P63128 1117 aa17.21■□□□□ 0.35
COMMD4-225ENST00000569245 ERVK-24P63145 666 aa17.21■□□□□ 0.35
COMMD4-225ENST00000569245 PDE4BQ07343 736 aa17.21■□□□□ 0.35
COMMD4-225ENST00000569245 MCMDC2Q4G0Z9 681 aa17.21■□□□□ 0.35
COMMD4-225ENST00000569245 TICAM2Q86XR7 235 aa17.21■□□□□ 0.35
COMMD4-225ENST00000569245 SLAIN1Q8ND83 568 aa17.21■□□□□ 0.35
COMMD4-225ENST00000569245 LPAR1Q92633 364 aa17.21■□□□□ 0.35
COMMD4-225ENST00000569245 TMX2Q9Y320 296 aa17.21■□□□□ 0.35
COMMD4-225ENST00000569245 BAZ2AQ9UIF9 1905 aaKnown RBP17.21■□□□□ 0.35
COMMD4-225ENST00000569245 UBXN2AP68543 259 aa17.2■□□□□ 0.34
COMMD4-225ENST00000569245 PPARAQ07869 468 aa17.2■□□□□ 0.34
COMMD4-225ENST00000569245 COG2Q14746 738 aa17.2■□□□□ 0.34
COMMD4-225ENST00000569245 Q3C1V9 767 aa17.2■□□□□ 0.34
COMMD4-225ENST00000569245 SAMD1Q6SPF0 538 aaPredicted RBP17.2■□□□□ 0.34
COMMD4-225ENST00000569245 VCPKMTQ9H867 229 aa17.2■□□□□ 0.34
COMMD4-225ENST00000569245 GOPCQ9HD26 462 aa17.2■□□□□ 0.34
COMMD4-225ENST00000569245 HOXC10Q9NYD6 342 aa17.2■□□□□ 0.34
COMMD4-225ENST00000569245 RABGAP1Q9Y3P9 1069 aa17.2■□□□□ 0.34
COMMD4-225ENST00000569245 ROBO3Q96MS0 1386 aa17.19■□□□□ 0.34
COMMD4-225ENST00000569245 A0A0D9SFI3 127 aa17.19■□□□□ 0.34
COMMD4-225ENST00000569245 ELNP15502 786 aa17.19■□□□□ 0.34
COMMD4-225ENST00000569245 EN2P19622 333 aaPredicted RBP17.19■□□□□ 0.34
COMMD4-225ENST00000569245 MAPK4P31152 587 aa17.19■□□□□ 0.34
COMMD4-225ENST00000569245 CCNA1P78396 465 aa17.19■□□□□ 0.34
COMMD4-225ENST00000569245 NMIQ13287 307 aaPredicted RBP17.19■□□□□ 0.34
COMMD4-225ENST00000569245 IRF5Q13568 498 aa17.19■□□□□ 0.34
COMMD4-225ENST00000569245 KIAA1755Q5JYT7 1200 aa17.19■□□□□ 0.34
COMMD4-225ENST00000569245 VPS53Q5VIR6 699 aa17.19■□□□□ 0.34
COMMD4-225ENST00000569245 WDR78Q5VTH9 848 aa17.19■□□□□ 0.34
COMMD4-225ENST00000569245 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.19■□□□□ 0.34
COMMD4-225ENST00000569245 FLOT1O75955 427 aa17.18■□□□□ 0.34
COMMD4-225ENST00000569245 TSPY3P0CV98 308 aa17.18■□□□□ 0.34
COMMD4-225ENST00000569245 TSPY8P0CW00 308 aa17.18■□□□□ 0.34
COMMD4-225ENST00000569245 SDSP20132 328 aa17.18■□□□□ 0.34
COMMD4-225ENST00000569245 MTFR1Q15390 333 aa17.18■□□□□ 0.34
COMMD4-225ENST00000569245 POTEEQ6S8J3 1075 aa17.18■□□□□ 0.34
COMMD4-225ENST00000569245 PORCNQ9H237 461 aa17.18■□□□□ 0.34
COMMD4-225ENST00000569245 DIAPH3Q9NSV4 1193 aa17.18■□□□□ 0.34
COMMD4-225ENST00000569245 SPDYE16A6NNV3 312 aaPredicted RBP17.17■□□□□ 0.34
COMMD4-225ENST00000569245 WDR46O15213 610 aaKnown RBP17.17■□□□□ 0.34
COMMD4-225ENST00000569245 CNMDO75829 334 aa17.17■□□□□ 0.34
COMMD4-225ENST00000569245 MFAP1P55081 439 aaKnown RBP17.17■□□□□ 0.34
COMMD4-225ENST00000569245 CTDSPL2Q05D32 466 aa17.17■□□□□ 0.34
COMMD4-225ENST00000569245 FAM47AQ5JRC9 791 aa17.17■□□□□ 0.34
COMMD4-225ENST00000569245 PLEKHH3Q7Z736 793 aa17.17■□□□□ 0.34
COMMD4-225ENST00000569245 PXYLP1Q8TE99 480 aa17.17■□□□□ 0.34
COMMD4-225ENST00000569245 NUDT12Q9BQG2 462 aa17.17■□□□□ 0.34
COMMD4-225ENST00000569245 RNF208Q9H0X6 261 aa17.17■□□□□ 0.34
COMMD4-225ENST00000569245 CLIP2Q9UDT6 1046 aa17.17■□□□□ 0.34
COMMD4-225ENST00000569245 GJD2Q9UKL4 321 aa17.17■□□□□ 0.34
COMMD4-225ENST00000569245 FOXP2O15409 715 aa17.16■□□□□ 0.34
COMMD4-225ENST00000569245 INHAP05111 366 aa17.16■□□□□ 0.34
COMMD4-225ENST00000569245 CCL5P13501 91 aa17.16■□□□□ 0.34
COMMD4-225ENST00000569245 CYP2B6P20813 491 aa17.16■□□□□ 0.34
COMMD4-225ENST00000569245 TFAP4Q01664 338 aa17.16■□□□□ 0.34
COMMD4-225ENST00000569245 CWC27Q6UX04 472 aaKnown RBP17.16■□□□□ 0.34
COMMD4-225ENST00000569245 LBX2Q6XYB7 198 aa17.16■□□□□ 0.34
COMMD4-225ENST00000569245 SOCS4Q8WXH5 440 aa17.16■□□□□ 0.34
COMMD4-225ENST00000569245 BTBD7Q9P203 1132 aa17.16■□□□□ 0.34
COMMD4-225ENST00000569245 NYAP2Q9P242 653 aa17.16■□□□□ 0.34
COMMD4-225ENST00000569245 HIP1O00291 1037 aa17.15■□□□□ 0.34
COMMD4-225ENST00000569245 FGAP02671 866 aa17.15■□□□□ 0.34
COMMD4-225ENST00000569245 HSPD1P10809 573 aaKnown RBP17.15■□□□□ 0.34
COMMD4-225ENST00000569245 PLS1Q14651 629 aa17.15■□□□□ 0.34
COMMD4-225ENST00000569245 ALX1Q15699 326 aa17.15■□□□□ 0.34
COMMD4-225ENST00000569245 C8orf34Q49A92 452 aa17.15■□□□□ 0.34
COMMD4-225ENST00000569245 GPR142Q7Z601 462 aa17.15■□□□□ 0.34
COMMD4-225ENST00000569245 ZNF589Q86UQ0 364 aaPredicted RBP17.15■□□□□ 0.34
COMMD4-225ENST00000569245 CEP95Q96GE4 821 aa17.15■□□□□ 0.34
COMMD4-225ENST00000569245 TOMM22Q9NS69 142 aa17.15■□□□□ 0.34
COMMD4-225ENST00000569245 CCDC171Q6TFL3 1326 aa17.15■□□□□ 0.34
COMMD4-225ENST00000569245 TSPY2A6NKD2 308 aa17.14■□□□□ 0.33
COMMD4-225ENST00000569245 RANBP6O60518 1105 aaKnown RBP17.14■□□□□ 0.33
COMMD4-225ENST00000569245 TTLL1O95922 423 aa17.14■□□□□ 0.33
COMMD4-225ENST00000569245 DSG3P32926 999 aa17.14■□□□□ 0.33
COMMD4-225ENST00000569245 FAM83BQ5T0W9 1011 aa17.14■□□□□ 0.33
COMMD4-225ENST00000569245 MB21D1Q8N884 522 aa17.14■□□□□ 0.33
COMMD4-225ENST00000569245 NEDD1Q8NHV4 660 aa17.14■□□□□ 0.33
COMMD4-225ENST00000569245 UNC93B1Q9H1C4 597 aa17.14■□□□□ 0.33
COMMD4-225ENST00000569245 INCENPQ9NQS7 918 aa17.14■□□□□ 0.33
COMMD4-225ENST00000569245 MTMR4Q9NYA4 1195 aa17.14■□□□□ 0.33
COMMD4-225ENST00000569245 IVNS1ABPQ9Y6Y0 642 aa17.14■□□□□ 0.33
COMMD4-225ENST00000569245 BRCA2P51587 3418 aa17.14■□□□□ 0.33
COMMD4-225ENST00000569245 IGKV6D-41A0A0C4DH26 115 aa17.13■□□□□ 0.33
COMMD4-225ENST00000569245 F5H6K3 240 aa17.13■□□□□ 0.33
COMMD4-225ENST00000569245 CDC45O75419 566 aa17.13■□□□□ 0.33
COMMD4-225ENST00000569245 RGS2P41220 211 aa17.13■□□□□ 0.33
COMMD4-225ENST00000569245 KLRC3Q07444 240 aa17.13■□□□□ 0.33
COMMD4-225ENST00000569245 NKX2-3Q8TAU0 364 aa17.13■□□□□ 0.33
COMMD4-225ENST00000569245 ATG4CQ96DT6 458 aa17.13■□□□□ 0.33
COMMD4-225ENST00000569245 NUP88Q99567 741 aaPredicted RBP17.13■□□□□ 0.33
COMMD4-225ENST00000569245 BACH2Q9BYV9 841 aa17.13■□□□□ 0.33
COMMD4-225ENST00000569245 SPATC1LQ9H0A9 340 aa17.13■□□□□ 0.33
COMMD4-225ENST00000569245 ANAPC4Q9UJX5 808 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms