RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 IPO8O15397 1037 aaKnown RBP18.1■□□□□ 0.49
USB1-214ENST00000568848 IGHA2P01877 340 aa18.1■□□□□ 0.49
USB1-214ENST00000568848 ITGB8P26012 769 aa18.1■□□□□ 0.49
USB1-214ENST00000568848 CCNA1P78396 465 aa18.1■□□□□ 0.49
USB1-214ENST00000568848 SPICE1Q8N0Z3 855 aa18.1■□□□□ 0.49
USB1-214ENST00000568848 GTF3C2Q8WUA4 911 aaPredicted RBP18.1■□□□□ 0.49
USB1-214ENST00000568848 BADQ92934 168 aa18.1■□□□□ 0.49
USB1-214ENST00000568848 DYNLL2Q96FJ2 89 aa18.1■□□□□ 0.49
USB1-214ENST00000568848 ZNF512BQ96KM6 892 aaPredicted RBP18.1■□□□□ 0.49
USB1-214ENST00000568848 TANGO6Q9C0B7 1094 aa18.1■□□□□ 0.49
USB1-214ENST00000568848 IL1RAPL2Q9NP60 686 aa18.1■□□□□ 0.49
USB1-214ENST00000568848 GINM1Q9NU53 330 aa18.1■□□□□ 0.49
USB1-214ENST00000568848 IVNS1ABPQ9Y6Y0 642 aa18.1■□□□□ 0.49
USB1-214ENST00000568848 CYP2D7A0A087X1C5 515 aa18.09■□□□□ 0.49
USB1-214ENST00000568848 DNM1LO00429 736 aa18.09■□□□□ 0.49
USB1-214ENST00000568848 POLR3DP05423 398 aaPredicted RBP18.09■□□□□ 0.49
USB1-214ENST00000568848 HOXC6P09630 235 aa18.09■□□□□ 0.49
USB1-214ENST00000568848 ERCC3P19447 782 aa18.09■□□□□ 0.49
USB1-214ENST00000568848 ADCYAP1R1P41586 468 aa18.09■□□□□ 0.49
USB1-214ENST00000568848 PLS1Q14651 629 aa18.09■□□□□ 0.49
USB1-214ENST00000568848 FAM47AQ5JRC9 791 aa18.09■□□□□ 0.49
USB1-214ENST00000568848 ZKSCAN2Q63HK3 967 aa18.09■□□□□ 0.49
USB1-214ENST00000568848 DPP9Q86TI2 863 aa18.09■□□□□ 0.49
USB1-214ENST00000568848 AACSQ86V21 672 aa18.09■□□□□ 0.49
USB1-214ENST00000568848 ITPRIPQ8IWB1 547 aa18.09■□□□□ 0.49
USB1-214ENST00000568848 MYLIPQ8WY64 445 aa18.09■□□□□ 0.49
USB1-214ENST00000568848 CDX2Q99626 313 aaPredicted RBP18.09■□□□□ 0.49
USB1-214ENST00000568848 EHD4Q9H223 541 aa18.09■□□□□ 0.49
USB1-214ENST00000568848 SMCHD1A6NHR9 2005 aa18.08■□□□□ 0.49
USB1-214ENST00000568848 TRIM43BA6NCK2 446 aa18.08■□□□□ 0.48
USB1-214ENST00000568848 APBB1O00213 710 aa18.08■□□□□ 0.48
USB1-214ENST00000568848 GLRX3O76003 335 aaKnown RBP18.08■□□□□ 0.48
USB1-214ENST00000568848 USP14P54578 494 aa18.08■□□□□ 0.48
USB1-214ENST00000568848 LBX2Q6XYB7 198 aa18.08■□□□□ 0.48
USB1-214ENST00000568848 SLC39A5Q6ZMH5 540 aa18.08■□□□□ 0.48
USB1-214ENST00000568848 LCORLQ8N3X6 602 aa18.08■□□□□ 0.48
USB1-214ENST00000568848 TRIM43Q96BQ3 446 aaPredicted RBP18.08■□□□□ 0.48
USB1-214ENST00000568848 ATG4CQ96DT6 458 aa18.08■□□□□ 0.48
USB1-214ENST00000568848 TTYH1Q9H313 450 aaPredicted RBP18.08■□□□□ 0.48
USB1-214ENST00000568848 CABP5Q9NP86 173 aa18.08■□□□□ 0.48
USB1-214ENST00000568848 NOP58Q9Y2X3 529 aaKnown RBP18.08■□□□□ 0.48
USB1-214ENST00000568848 MAGEB6P1A0A0J9YX57 407 aa18.07■□□□□ 0.48
USB1-214ENST00000568848 PRKAB2O43741 272 aa18.07■□□□□ 0.48
USB1-214ENST00000568848 EPHB4P54760 987 aa18.07■□□□□ 0.48
USB1-214ENST00000568848 GABPAQ06546 454 aa18.07■□□□□ 0.48
USB1-214ENST00000568848 ZNF697Q5TEC3 545 aa18.07■□□□□ 0.48
USB1-214ENST00000568848 SIAH1Q8IUQ4 282 aa18.07■□□□□ 0.48
USB1-214ENST00000568848 SPATC1LQ9H0A9 340 aa18.07■□□□□ 0.48
USB1-214ENST00000568848 PDLIM7Q9NR12 457 aa18.07■□□□□ 0.48
USB1-214ENST00000568848 MCM9Q9NXL9 1143 aa18.07■□□□□ 0.48
USB1-214ENST00000568848 BAZ2AQ9UIF9 1905 aaKnown RBP18.07■□□□□ 0.48
USB1-214ENST00000568848 COL11A1P12107 1806 aaPredicted RBP18.07■□□□□ 0.48
USB1-214ENST00000568848 ZNF236Q9UL36 1845 aa18.07■□□□□ 0.48
USB1-214ENST00000568848 TTC28Q96AY4 2481 aa18.07■□□□□ 0.48
USB1-214ENST00000568848 PGK2P07205 417 aa18.06■□□□□ 0.48
USB1-214ENST00000568848 AKR1B1P15121 316 aa18.06■□□□□ 0.48
USB1-214ENST00000568848 PDE6AP16499 860 aa18.06■□□□□ 0.48
USB1-214ENST00000568848 TAL1P17542 331 aaPredicted RBP18.06■□□□□ 0.48
USB1-214ENST00000568848 TTC6Q86TZ1 520 aa18.06■□□□□ 0.48
USB1-214ENST00000568848 NCAPG2Q86XI2 1143 aa18.06■□□□□ 0.48
USB1-214ENST00000568848 PARP14Q460N5 1801 aa18.05■□□□□ 0.48
USB1-214ENST00000568848 ZNF532Q9HCE3 1301 aa18.05■□□□□ 0.48
USB1-214ENST00000568848 MAP3K12Q12852 859 aa18.05■□□□□ 0.48
USB1-214ENST00000568848 LRRC41Q15345 812 aa18.05■□□□□ 0.48
USB1-214ENST00000568848 CEP85Q6P2H3 762 aa18.05■□□□□ 0.48
USB1-214ENST00000568848 DNAJC2Q99543 621 aaKnown RBP18.05■□□□□ 0.48
USB1-214ENST00000568848 SEMA6BQ9H3T3 888 aa18.05■□□□□ 0.48
USB1-214ENST00000568848 ARMT1Q9H993 441 aa18.05■□□□□ 0.48
USB1-214ENST00000568848 FBXO28Q9NVF7 368 aa18.05■□□□□ 0.48
USB1-214ENST00000568848 PRKAG2Q9UGJ0 569 aa18.05■□□□□ 0.48
USB1-214ENST00000568848 ZNFX1Q9P2E3 1918 aaKnown RBP18.05■□□□□ 0.48
USB1-214ENST00000568848 MYH8P13535 1937 aa18.04■□□□□ 0.48
USB1-214ENST00000568848 KBTBD13C9JR72 458 aa18.04■□□□□ 0.48
USB1-214ENST00000568848 PGK1P00558 417 aa18.04■□□□□ 0.48
USB1-214ENST00000568848 IRX5P78411 483 aaPredicted RBP18.04■□□□□ 0.48
USB1-214ENST00000568848 COG2Q14746 738 aa18.04■□□□□ 0.48
USB1-214ENST00000568848 FAM109BQ6ICB4 259 aaPredicted RBP18.04■□□□□ 0.48
USB1-214ENST00000568848 MAFAQ8NHW3 353 aaPredicted RBP18.04■□□□□ 0.48
USB1-214ENST00000568848 GOLIM4O00461 696 aa18.03■□□□□ 0.48
USB1-214ENST00000568848 FLOT1O75955 427 aa18.03■□□□□ 0.48
USB1-214ENST00000568848 TLE2Q04725 743 aa18.03■□□□□ 0.48
USB1-214ENST00000568848 SLC9C2Q5TAH2 1124 aa18.03■□□□□ 0.48
USB1-214ENST00000568848 OLFML2BQ68BL8 750 aa18.03■□□□□ 0.48
USB1-214ENST00000568848 FTSJ3Q8IY81 847 aaKnown RBP18.03■□□□□ 0.48
USB1-214ENST00000568848 PANK1Q8TE04 598 aa18.03■□□□□ 0.48
USB1-214ENST00000568848 MAML3Q96JK9 1138 aa18.03■□□□□ 0.48
USB1-214ENST00000568848 TCRBV5S4A2TA0A5A2 114 aa18.02■□□□□ 0.48
USB1-214ENST00000568848 SEPT4O43236 478 aa18.02■□□□□ 0.48
USB1-214ENST00000568848 MSCO60682 206 aa18.02■□□□□ 0.48
USB1-214ENST00000568848 DSG3P32926 999 aa18.02■□□□□ 0.48
USB1-214ENST00000568848 TMEM132BQ14DG7 1078 aa18.02■□□□□ 0.48
USB1-214ENST00000568848 DCP1AQ9NPI6 582 aaPredicted RBP18.02■□□□□ 0.48
USB1-214ENST00000568848 SNX17Q15036 470 aa18.01■□□□□ 0.47
USB1-214ENST00000568848 STK11IPQ8N1F8 1099 aa18.01■□□□□ 0.47
USB1-214ENST00000568848 USP38Q8NB14 1042 aa18.01■□□□□ 0.47
USB1-214ENST00000568848 ARRDC4Q8NCT1 418 aa18.01■□□□□ 0.47
USB1-214ENST00000568848 CRNKL1Q9BZJ0 848 aaKnown RBP18.01■□□□□ 0.47
USB1-214ENST00000568848 PLXNA1Q9UIW2 1896 aa18.01■□□□□ 0.47
USB1-214ENST00000568848 RAD21O60216 631 aa18■□□□□ 0.47
USB1-214ENST00000568848 PQBP1O60828 265 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms