RNA–Protein interactions for RNA: ENST00000568535.1

BBS4-214, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-214ENST00000568535 FAM177A1Q8N128 213 aaPredicted RBP9.52□□□□□ -0.89
BBS4-214ENST00000568535 CCDC82Q8N4S0 544 aa9.52□□□□□ -0.89
BBS4-214ENST00000568535 TMEM87AQ8NBN3 555 aa9.52□□□□□ -0.89
BBS4-214ENST00000568535 BRMS1Q9HCU9 246 aa9.52□□□□□ -0.89
BBS4-214ENST00000568535 CLIP2Q9UDT6 1046 aa9.52□□□□□ -0.89
BBS4-214ENST00000568535 DDX49Q9Y6V7 483 aaKnown RBP9.52□□□□□ -0.89
BBS4-214ENST00000568535 V9GY48 417 aaPredicted RBP9.52□□□□□ -0.89
BBS4-214ENST00000568535 PSME4Q14997 1843 aa9.52□□□□□ -0.89
BBS4-214ENST00000568535 PALM3A6NDB9 673 aaPredicted RBP9.51□□□□□ -0.89
BBS4-214ENST00000568535 GOLGA6L4A6NEF3 574 aa9.51□□□□□ -0.89
BBS4-214ENST00000568535 GRIN3BO60391 1043 aa9.51□□□□□ -0.89
BBS4-214ENST00000568535 DTNBO60941 627 aa9.51□□□□□ -0.89
BBS4-214ENST00000568535 PPFIA3O75145 1194 aa9.51□□□□□ -0.89
BBS4-214ENST00000568535 LMOD1P29536 600 aaPredicted RBP9.51□□□□□ -0.89
BBS4-214ENST00000568535 GUCY1B3Q02153 619 aa9.51□□□□□ -0.89
BBS4-214ENST00000568535 DNM1Q05193 864 aaKnown RBP9.51□□□□□ -0.89
BBS4-214ENST00000568535 KLHL40Q2TBA0 621 aa9.51□□□□□ -0.89
BBS4-214ENST00000568535 KIF4BQ2VIQ3 1234 aa9.51□□□□□ -0.89
BBS4-214ENST00000568535 NBPF9Q3BBW0 867 aa9.51□□□□□ -0.89
BBS4-214ENST00000568535 ASPRV1Q53RT3 343 aa9.51□□□□□ -0.89
BBS4-214ENST00000568535 KRT40Q6A162 431 aa9.51□□□□□ -0.89
BBS4-214ENST00000568535 DPY19L2Q6NUT2 758 aa9.51□□□□□ -0.89
BBS4-214ENST00000568535 APOBEC3FQ8IUX4 373 aaKnown RBP9.51□□□□□ -0.89
BBS4-214ENST00000568535 MKL1Q969V6 931 aa9.51□□□□□ -0.89
BBS4-214ENST00000568535 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.51□□□□□ -0.89
BBS4-214ENST00000568535 LMBRD1Q9NUN5 540 aa9.51□□□□□ -0.89
BBS4-214ENST00000568535 NYAP2Q9P242 653 aa9.51□□□□□ -0.89
BBS4-214ENST00000568535 SYNPO2Q9UMS6 1093 aa9.51□□□□□ -0.89
BBS4-214ENST00000568535 FOCADQ5VW36 1801 aa9.51□□□□□ -0.89
BBS4-214ENST00000568535 ARFGEF1Q9Y6D6 1849 aa9.51□□□□□ -0.89
BBS4-214ENST00000568535 DDX60LQ5H9U9 1706 aaKnown RBP9.51□□□□□ -0.89
BBS4-214ENST00000568535 MYH1P12882 1939 aa9.5□□□□□ -0.89
BBS4-214ENST00000568535 KLRF2D3W0D1 207 aa9.5□□□□□ -0.89
BBS4-214ENST00000568535 PLEKHA8P1O95397 391 aa9.5□□□□□ -0.89
BBS4-214ENST00000568535 FOSBP53539 338 aa9.5□□□□□ -0.89
BBS4-214ENST00000568535 UBE2HP62256 183 aa9.5□□□□□ -0.89
BBS4-214ENST00000568535 ATP2B2Q01814 1243 aa9.5□□□□□ -0.89
BBS4-214ENST00000568535 FUT2Q10981 343 aa9.5□□□□□ -0.89
BBS4-214ENST00000568535 RASA3Q14644 834 aa9.5□□□□□ -0.89
BBS4-214ENST00000568535 PFKFB3Q16875 520 aaPredicted RBP9.5□□□□□ -0.89
BBS4-214ENST00000568535 TBC1D10BQ4KMP7 808 aaPredicted RBP9.5□□□□□ -0.89
BBS4-214ENST00000568535 GPATCH4Q5T3I0 446 aaKnown RBP9.5□□□□□ -0.89
BBS4-214ENST00000568535 USP48Q86UV5 1035 aa9.5□□□□□ -0.89
BBS4-214ENST00000568535 CMTR1Q8N1G2 835 aaKnown RBP9.5□□□□□ -0.89
BBS4-214ENST00000568535 SRBD1Q8N5C6 995 aaKnown RBP9.5□□□□□ -0.89
BBS4-214ENST00000568535 JMYQ8N9B5 988 aa9.5□□□□□ -0.89
BBS4-214ENST00000568535 CCDC12Q8WUD4 166 aaPredicted RBP9.5□□□□□ -0.89
BBS4-214ENST00000568535 SYAP1Q96A49 352 aaPredicted RBP9.5□□□□□ -0.89
BBS4-214ENST00000568535 KLRG1Q96E93 195 aa9.5□□□□□ -0.89
BBS4-214ENST00000568535 SPATA32Q96LK8 384 aa9.5□□□□□ -0.89
BBS4-214ENST00000568535 FOXP1Q9H334 677 aaPredicted RBP9.5□□□□□ -0.89
BBS4-214ENST00000568535 SH2D4AQ9H788 454 aa9.5□□□□□ -0.89
BBS4-214ENST00000568535 ARHGEF10LQ9HCE6 1279 aa9.5□□□□□ -0.89
BBS4-214ENST00000568535 SH3GLB2Q9NR46 395 aa9.5□□□□□ -0.89
BBS4-214ENST00000568535 GINM1Q9NU53 330 aa9.5□□□□□ -0.89
BBS4-214ENST00000568535 GPRC5DQ9NZD1 345 aa9.5□□□□□ -0.89
BBS4-214ENST00000568535 RNF181Q9P0P0 153 aa9.5□□□□□ -0.89
BBS4-214ENST00000568535 SEC63Q9UGP8 760 aaKnown RBP9.5□□□□□ -0.89
BBS4-214ENST00000568535 MAD2L2Q9UI95 211 aa9.5□□□□□ -0.89
BBS4-214ENST00000568535 CNPY2Q9Y2B0 182 aa9.5□□□□□ -0.89
BBS4-214ENST00000568535 ELP1O95163 1332 aa9.5□□□□□ -0.89
BBS4-214ENST00000568535 ZNF541Q9H0D2 1346 aa9.5□□□□□ -0.89
BBS4-214ENST00000568535 CNTNAP1P78357 1384 aa9.5□□□□□ -0.89
BBS4-214ENST00000568535 ZNF646O15015 1829 aaPredicted RBP9.49□□□□□ -0.89
BBS4-214ENST00000568535 hCG_1984214I3L0E3 225 aa9.49□□□□□ -0.89
BBS4-214ENST00000568535 FIBPO43427 364 aa9.49□□□□□ -0.89
BBS4-214ENST00000568535 MMP1P03956 469 aa9.49□□□□□ -0.89
BBS4-214ENST00000568535 PDHBP11177 359 aa9.49□□□□□ -0.89
BBS4-214ENST00000568535 SCG2P13521 617 aa9.49□□□□□ -0.89
BBS4-214ENST00000568535 CALML3P27482 149 aa9.49□□□□□ -0.89
BBS4-214ENST00000568535 KIF23Q02241 960 aaPredicted RBP9.49□□□□□ -0.89
BBS4-214ENST00000568535 MAP3K10Q02779 954 aa9.49□□□□□ -0.89
BBS4-214ENST00000568535 ICA1Q05084 483 aa9.49□□□□□ -0.89
BBS4-214ENST00000568535 DCAF15Q66K64 600 aa9.49□□□□□ -0.89
BBS4-214ENST00000568535 GALNT17Q6IS24 598 aa9.49□□□□□ -0.89
BBS4-214ENST00000568535 SAMD7Q7Z3H4 446 aa9.49□□□□□ -0.89
BBS4-214ENST00000568535 ZNF713Q8N859 430 aaPredicted RBP9.49□□□□□ -0.89
BBS4-214ENST00000568535 CCDC148Q8NFR7 591 aa9.49□□□□□ -0.89
BBS4-214ENST00000568535 DCAF4Q8WV16 495 aa9.49□□□□□ -0.89
BBS4-214ENST00000568535 RRP36Q96EU6 259 aaKnown RBP9.49□□□□□ -0.89
BBS4-214ENST00000568535 SPZ1Q9BXG8 430 aa9.49□□□□□ -0.89
BBS4-214ENST00000568535 TMEM39BQ9GZU3 492 aa9.49□□□□□ -0.89
BBS4-214ENST00000568535 DNAJC18Q9H819 358 aa9.49□□□□□ -0.89
BBS4-214ENST00000568535 HACL1Q9UJ83 578 aa9.49□□□□□ -0.89
BBS4-214ENST00000568535 MTMR7Q9Y216 660 aa9.49□□□□□ -0.89
BBS4-214ENST00000568535 PPP2R3BQ9Y5P8 575 aa9.49□□□□□ -0.89
BBS4-214ENST00000568535 CNTNAP5Q8WYK1 1306 aa9.49□□□□□ -0.89
BBS4-214ENST00000568535 CDK5RAP2Q96SN8 1893 aa9.49□□□□□ -0.89
BBS4-214ENST00000568535 ECM29Q5VYK3 1845 aa9.48□□□□□ -0.89
BBS4-214ENST00000568535 USP17L5A8MUK1 530 aa9.48□□□□□ -0.89
BBS4-214ENST00000568535 GH2P01242 217 aa9.48□□□□□ -0.89
BBS4-214ENST00000568535 ASNSP08243 561 aa9.48□□□□□ -0.89
BBS4-214ENST00000568535 SNHG28P0DPA3 235 aa9.48□□□□□ -0.89
BBS4-214ENST00000568535 EEF2P13639 858 aaKnown RBP9.48□□□□□ -0.89
BBS4-214ENST00000568535 U2AF2P26368 475 aaKnown RBP eCLIP9.48□□□□□ -0.893e-6■■■■□ 23.8
BBS4-214ENST00000568535 GUCY1A2P33402 732 aa9.48□□□□□ -0.89
BBS4-214ENST00000568535 KRT2P35908 639 aa9.48□□□□□ -0.89
BBS4-214ENST00000568535 NLRP5P59047 1200 aa9.48□□□□□ -0.89
BBS4-214ENST00000568535 HTRA3P83110 453 aa9.48□□□□□ -0.89
BBS4-214ENST00000568535 SEPT2Q15019 361 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms