RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 MINDY4BA8MYZ0 360 aa9.76□□□□□ -0.85
HDGFL3-205ENST00000568129 HIP1O00291 1037 aa9.76□□□□□ -0.85
HDGFL3-205ENST00000568129 MPHOSPH10O00566 681 aaKnown RBP9.76□□□□□ -0.85
HDGFL3-205ENST00000568129 FMNL1O95466 1100 aaPredicted RBP9.76□□□□□ -0.85
HDGFL3-205ENST00000568129 APPP05067 770 aa9.76□□□□□ -0.85
HDGFL3-205ENST00000568129 EEF2P13639 858 aaKnown RBP9.76□□□□□ -0.85
HDGFL3-205ENST00000568129 TDO2P48775 406 aa9.76□□□□□ -0.85
HDGFL3-205ENST00000568129 ERVK-9P63128 1117 aa9.76□□□□□ -0.85
HDGFL3-205ENST00000568129 ERVK-24P63145 666 aa9.76□□□□□ -0.85
HDGFL3-205ENST00000568129 IRX6P78412 446 aaPredicted RBP9.76□□□□□ -0.85
HDGFL3-205ENST00000568129 ICA1Q05084 483 aa9.76□□□□□ -0.85
HDGFL3-205ENST00000568129 PPARAQ07869 468 aa9.76□□□□□ -0.85
HDGFL3-205ENST00000568129 NMIQ13287 307 aaPredicted RBP9.76□□□□□ -0.85
HDGFL3-205ENST00000568129 COG2Q14746 738 aa9.76□□□□□ -0.85
HDGFL3-205ENST00000568129 VPS53Q5VIR6 699 aa9.76□□□□□ -0.85
HDGFL3-205ENST00000568129 CCDC129Q6ZRS4 1044 aa9.76□□□□□ -0.85
HDGFL3-205ENST00000568129 ZNF589Q86UQ0 364 aaPredicted RBP9.76□□□□□ -0.85
HDGFL3-205ENST00000568129 GPRC5AQ8NFJ5 357 aa9.76□□□□□ -0.85
HDGFL3-205ENST00000568129 NAPBQ9H115 298 aa9.76□□□□□ -0.85
HDGFL3-205ENST00000568129 RPAP3Q9H6T3 665 aaPredicted RBP9.76□□□□□ -0.85
HDGFL3-205ENST00000568129 SH2D4AQ9H788 454 aa9.76□□□□□ -0.85
HDGFL3-205ENST00000568129 MKNK2Q9HBH9 465 aa9.76□□□□□ -0.85
HDGFL3-205ENST00000568129 HOXC10Q9NYD6 342 aa9.76□□□□□ -0.85
HDGFL3-205ENST00000568129 GABRQQ9UN88 632 aa9.76□□□□□ -0.85
HDGFL3-205ENST00000568129 TACC3Q9Y6A5 838 aa9.76□□□□□ -0.85
HDGFL3-205ENST00000568129 ZNF236Q9UL36 1845 aa9.76□□□□□ -0.85
HDGFL3-205ENST00000568129 SMCHD1A6NHR9 2005 aa9.76□□□□□ -0.85
HDGFL3-205ENST00000568129 PDE4DIPQ5VU43 2346 aa9.76□□□□□ -0.85
HDGFL3-205ENST00000568129 MKI67P46013 3256 aaKnown RBP9.75□□□□□ -0.85
HDGFL3-205ENST00000568129 PLXNA1Q9UIW2 1896 aa9.75□□□□□ -0.85
HDGFL3-205ENST00000568129 TRIM6-TRIM34B2RNG4 842 aa9.75□□□□□ -0.85
HDGFL3-205ENST00000568129 WDR46O15213 610 aaKnown RBP9.75□□□□□ -0.85
HDGFL3-205ENST00000568129 ORC4O43929 436 aa9.75□□□□□ -0.85
HDGFL3-205ENST00000568129 IGHA2P01877 340 aa9.75□□□□□ -0.85
HDGFL3-205ENST00000568129 XRCC5P13010 732 aaKnown RBP9.75□□□□□ -0.85
HDGFL3-205ENST00000568129 GSPT1P15170 499 aaKnown RBP9.75□□□□□ -0.85
HDGFL3-205ENST00000568129 CAPN2P17655 700 aa9.75□□□□□ -0.85
HDGFL3-205ENST00000568129 MAPK4P31152 587 aa9.75□□□□□ -0.85
HDGFL3-205ENST00000568129 DSG3P32926 999 aa9.75□□□□□ -0.85
HDGFL3-205ENST00000568129 FLT3LGP49771 235 aa9.75□□□□□ -0.85
HDGFL3-205ENST00000568129 NT5C2P49902 561 aa9.75□□□□□ -0.85
HDGFL3-205ENST00000568129 PRKCZQ05513 592 aa9.75□□□□□ -0.85
HDGFL3-205ENST00000568129 PDE4BQ07343 736 aa9.75□□□□□ -0.85
HDGFL3-205ENST00000568129 SLC9C1Q4G0N8 1177 aa9.75□□□□□ -0.85
HDGFL3-205ENST00000568129 TTC22Q5TAA0 569 aa9.75□□□□□ -0.85
HDGFL3-205ENST00000568129 ZNF444Q8N0Y2 327 aaPredicted RBP9.75□□□□□ -0.85
HDGFL3-205ENST00000568129 SLAIN1Q8ND83 568 aa9.75□□□□□ -0.85
HDGFL3-205ENST00000568129 RILPL2Q969X0 211 aa9.75□□□□□ -0.85
HDGFL3-205ENST00000568129 FEZ1Q99689 392 aa9.75□□□□□ -0.85
HDGFL3-205ENST00000568129 MTMR4Q9NYA4 1195 aa9.75□□□□□ -0.85
HDGFL3-205ENST00000568129 CCDC171Q6TFL3 1326 aa9.75□□□□□ -0.85
HDGFL3-205ENST00000568129 TNPO2O14787 897 aaKnown RBP9.74□□□□□ -0.85
HDGFL3-205ENST00000568129 SLC3A2P08195 630 aaKnown RBP9.74□□□□□ -0.85
HDGFL3-205ENST00000568129 PCP11498 1178 aaKnown RBP9.74□□□□□ -0.85
HDGFL3-205ENST00000568129 GRK4P32298 578 aa9.74□□□□□ -0.85
HDGFL3-205ENST00000568129 MFAP1P55081 439 aaKnown RBP9.74□□□□□ -0.85
HDGFL3-205ENST00000568129 ZYXQ15942 572 aaKnown RBP9.74□□□□□ -0.85
HDGFL3-205ENST00000568129 MORN1Q5T089 497 aa9.74□□□□□ -0.85
HDGFL3-205ENST00000568129 CLEC10AQ8IUN9 316 aa9.74□□□□□ -0.85
HDGFL3-205ENST00000568129 MB21D1Q8N884 522 aa9.74□□□□□ -0.85
HDGFL3-205ENST00000568129 GMCL1P1Q8NEA9 526 aa9.74□□□□□ -0.85
HDGFL3-205ENST00000568129 COA7Q96BR5 231 aa9.74□□□□□ -0.85
HDGFL3-205ENST00000568129 DSCC1Q9BVC3 393 aa9.74□□□□□ -0.85
HDGFL3-205ENST00000568129 TCP11L1Q9NUJ3 509 aa9.74□□□□□ -0.85
HDGFL3-205ENST00000568129 BTBD7Q9P203 1132 aa9.74□□□□□ -0.85
HDGFL3-205ENST00000568129 POTEFA5A3E0 1075 aa9.73□□□□□ -0.85
HDGFL3-205ENST00000568129 F5H6K3 240 aa9.73□□□□□ -0.85
HDGFL3-205ENST00000568129 PEX10O60683 326 aa9.73□□□□□ -0.85
HDGFL3-205ENST00000568129 TTLL1O95922 423 aa9.73□□□□□ -0.85
HDGFL3-205ENST00000568129 HOXC6P09630 235 aa9.73□□□□□ -0.85
HDGFL3-205ENST00000568129 MLLT1Q03111 559 aaPredicted RBP9.73□□□□□ -0.85
HDGFL3-205ENST00000568129 KLRC3Q07444 240 aa9.73□□□□□ -0.85
HDGFL3-205ENST00000568129 PPP4R3BQ5MIZ7 849 aa9.73□□□□□ -0.85
HDGFL3-205ENST00000568129 SHCBP1Q8NEM2 672 aa9.73□□□□□ -0.85
HDGFL3-205ENST00000568129 REPS2Q8NFH8 660 aa9.73□□□□□ -0.85
HDGFL3-205ENST00000568129 RAET1EQ8TD07 263 aa9.73□□□□□ -0.85
HDGFL3-205ENST00000568129 CEP95Q96GE4 821 aa9.73□□□□□ -0.85
HDGFL3-205ENST00000568129 NBPF3Q9H094 633 aa9.73□□□□□ -0.85
HDGFL3-205ENST00000568129 PORCNQ9H237 461 aa9.73□□□□□ -0.85
HDGFL3-205ENST00000568129 GOPCQ9HD26 462 aa9.73□□□□□ -0.85
HDGFL3-205ENST00000568129 IL17RBQ9NRM6 502 aa9.73□□□□□ -0.85
HDGFL3-205ENST00000568129 ATP2A1O14983 1001 aa9.72□□□□□ -0.85
HDGFL3-205ENST00000568129 ADCY3O60266 1144 aa9.72□□□□□ -0.85
HDGFL3-205ENST00000568129 PLA2G6O60733 806 aa9.72□□□□□ -0.85
HDGFL3-205ENST00000568129 PRDM1O75626 825 aa9.72□□□□□ -0.85
HDGFL3-205ENST00000568129 SOX10P56693 466 aa9.72□□□□□ -0.85
HDGFL3-205ENST00000568129 CCNA1P78396 465 aa9.72□□□□□ -0.85
HDGFL3-205ENST00000568129 TFAP4Q01664 338 aa9.72□□□□□ -0.85
HDGFL3-205ENST00000568129 CTDSPL2Q05D32 466 aa9.72□□□□□ -0.85
HDGFL3-205ENST00000568129 MAP3K21Q5TCX8 1036 aa9.72□□□□□ -0.85
HDGFL3-205ENST00000568129 CWC27Q6UX04 472 aaKnown RBP9.72□□□□□ -0.85
HDGFL3-205ENST00000568129 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.72□□□□□ -0.85
HDGFL3-205ENST00000568129 GPR142Q7Z601 462 aa9.72□□□□□ -0.85
HDGFL3-205ENST00000568129 SH3TC2Q8TF17 1288 aa9.72□□□□□ -0.85
HDGFL3-205ENST00000568129 STAG1Q8WVM7 1258 aa9.72□□□□□ -0.85
HDGFL3-205ENST00000568129 SOCS4Q8WXH5 440 aa9.72□□□□□ -0.85
HDGFL3-205ENST00000568129 IL25Q9H293 177 aa9.72□□□□□ -0.85
HDGFL3-205ENST00000568129 INCENPQ9NQS7 918 aa9.72□□□□□ -0.85
HDGFL3-205ENST00000568129 PPP1R9AQ9ULJ8 1098 aa9.72□□□□□ -0.85
HDGFL3-205ENST00000568129 FRMPD3Q5JV73 1810 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms