RNA–Protein interactions for RNA: ENST00000567910.1

ABCA3-205, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCA3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-205ENST00000567910 CYP21A2P08686 494 aa12.61□□□□□ -0.39
ABCA3-205ENST00000567910 HOXA7P31268 230 aaPredicted RBP12.61□□□□□ -0.39
ABCA3-205ENST00000567910 ANAPC15P60006 121 aa12.61□□□□□ -0.39
ABCA3-205ENST00000567910 KRT32Q14532 448 aa12.61□□□□□ -0.39
ABCA3-205ENST00000567910 USP17L2Q6R6M4 530 aa12.61□□□□□ -0.39
ABCA3-205ENST00000567910 CD99L2Q8TCZ2 262 aa12.61□□□□□ -0.39
ABCA3-205ENST00000567910 MKNK2Q9HBH9 465 aa12.61□□□□□ -0.39
ABCA3-205ENST00000567910 TSHZ2Q9NRE2 1034 aa12.61□□□□□ -0.39
ABCA3-205ENST00000567910 NOVP48745 357 aa12.6□□□□□ -0.39
ABCA3-205ENST00000567910 TFAP4Q01664 338 aa12.6□□□□□ -0.39
ABCA3-205ENST00000567910 COL9A3Q14050 684 aaPredicted RBP12.6□□□□□ -0.39
ABCA3-205ENST00000567910 RASGRP2Q7LDG7 609 aa12.6□□□□□ -0.39
ABCA3-205ENST00000567910 NEDD1Q8NHV4 660 aa12.6□□□□□ -0.39
ABCA3-205ENST00000567910 STAG1Q8WVM7 1258 aa12.6□□□□□ -0.39
ABCA3-205ENST00000567910 JAKMIP1Q96N16 626 aaKnown RBP12.6□□□□□ -0.39
ABCA3-205ENST00000567910 PARK7Q99497 189 aaKnown RBP12.6□□□□□ -0.39
ABCA3-205ENST00000567910 P2RX7Q99572 595 aaKnown RBP12.6□□□□□ -0.39
ABCA3-205ENST00000567910 FEZ1Q99689 392 aa12.6□□□□□ -0.39
ABCA3-205ENST00000567910 KANSL2Q9H9L4 492 aa12.6□□□□□ -0.39
ABCA3-205ENST00000567910 TXNRD2Q9NNW7 524 aa12.6□□□□□ -0.39
ABCA3-205ENST00000567910 TOMM22Q9NS69 142 aa12.6□□□□□ -0.39
ABCA3-205ENST00000567910 MTMR4Q9NYA4 1195 aa12.6□□□□□ -0.39
ABCA3-205ENST00000567910 TMOD4Q9NZQ9 345 aa12.6□□□□□ -0.39
ABCA3-205ENST00000567910 SNX14Q9Y5W7 946 aa12.6□□□□□ -0.39
ABCA3-205ENST00000567910 CNMDO75829 334 aa12.59□□□□□ -0.39
ABCA3-205ENST00000567910 SP3Q02447 781 aa12.59□□□□□ -0.39
ABCA3-205ENST00000567910 PDE4BQ07343 736 aa12.59□□□□□ -0.39
ABCA3-205ENST00000567910 TRDNQ13061 729 aa12.59□□□□□ -0.39
ABCA3-205ENST00000567910 AKNAD1Q5T1N1 836 aa12.59□□□□□ -0.39
ABCA3-205ENST00000567910 CATSPERGQ6ZRH7 1159 aa12.59□□□□□ -0.39
ABCA3-205ENST00000567910 RALYLQ86SE5 291 aaKnown RBP12.59□□□□□ -0.39
ABCA3-205ENST00000567910 RASEFQ8IZ41 740 aa12.59□□□□□ -0.39
ABCA3-205ENST00000567910 ZNF444Q8N0Y2 327 aaPredicted RBP12.59□□□□□ -0.39
ABCA3-205ENST00000567910 SPICE1Q8N0Z3 855 aa12.59□□□□□ -0.39
ABCA3-205ENST00000567910 RNF41Q9H4P4 317 aaPredicted RBP12.59□□□□□ -0.39
ABCA3-205ENST00000567910 RPAP3Q9H6T3 665 aaPredicted RBP12.59□□□□□ -0.39
ABCA3-205ENST00000567910 VCPKMTQ9H867 229 aa12.59□□□□□ -0.39
ABCA3-205ENST00000567910 NYAP2Q9P242 653 aa12.59□□□□□ -0.39
ABCA3-205ENST00000567910 PLXNB2O15031 1838 aa12.59□□□□□ -0.39
ABCA3-205ENST00000567910 COL11A1P12107 1806 aaPredicted RBP12.58□□□□□ -0.4
ABCA3-205ENST00000567910 ECM2O94769 699 aaPredicted RBP12.58□□□□□ -0.4
ABCA3-205ENST00000567910 PSMA5P28066 241 aa12.58□□□□□ -0.4
ABCA3-205ENST00000567910 USP14P54578 494 aa12.58□□□□□ -0.4
ABCA3-205ENST00000567910 HERVK_113P62684 666 aa12.58□□□□□ -0.4
ABCA3-205ENST00000567910 LACTBP83111 547 aaPredicted RBP12.58□□□□□ -0.4
ABCA3-205ENST00000567910 MFSD6Q6ZSS7 791 aa12.58□□□□□ -0.4
ABCA3-205ENST00000567910 STOX1Q6ZVD7 989 aa12.58□□□□□ -0.4
ABCA3-205ENST00000567910 OTOP1Q7RTM1 612 aa12.58□□□□□ -0.4
ABCA3-205ENST00000567910 LRRC47Q8N1G4 583 aaKnown RBP12.58□□□□□ -0.4
ABCA3-205ENST00000567910 ANKRD13CQ8N6S4 541 aa12.58□□□□□ -0.4
ABCA3-205ENST00000567910 KCNB2Q92953 911 aa12.58□□□□□ -0.4
ABCA3-205ENST00000567910 MKL1Q969V6 931 aa12.58□□□□□ -0.4
ABCA3-205ENST00000567910 NUP88Q99567 741 aaPredicted RBP12.58□□□□□ -0.4
ABCA3-205ENST00000567910 MCOLN1Q9GZU1 580 aa12.58□□□□□ -0.4
ABCA3-205ENST00000567910 ARHGEF10LQ9HCE6 1279 aa12.58□□□□□ -0.4
ABCA3-205ENST00000567910 RBPJLQ9UBG7 517 aa12.58□□□□□ -0.4
ABCA3-205ENST00000567910 E7EWF7 191 aa12.57□□□□□ -0.4
ABCA3-205ENST00000567910 NDUFB10O96000 172 aa12.57□□□□□ -0.4
ABCA3-205ENST00000567910 TSPY3P0CV98 308 aa12.57□□□□□ -0.4
ABCA3-205ENST00000567910 TSPY8P0CW00 308 aa12.57□□□□□ -0.4
ABCA3-205ENST00000567910 CASTP20810 708 aaKnown RBP12.57□□□□□ -0.4
ABCA3-205ENST00000567910 ATP2B2Q01814 1243 aa12.57□□□□□ -0.4
ABCA3-205ENST00000567910 RABEP1Q15276 862 aa12.57□□□□□ -0.4
ABCA3-205ENST00000567910 RRP12Q5JTH9 1297 aaKnown RBP12.57□□□□□ -0.4
ABCA3-205ENST00000567910 RCSD1Q6JBY9 416 aa12.57□□□□□ -0.4
ABCA3-205ENST00000567910 BLOC1S2Q6QNY1 142 aa12.57□□□□□ -0.4
ABCA3-205ENST00000567910 CTU1Q7Z7A3 348 aaKnown RBP12.57□□□□□ -0.4
ABCA3-205ENST00000567910 TRIM47Q96LD4 638 aa12.57□□□□□ -0.4
ABCA3-205ENST00000567910 CNNM2Q9H8M5 875 aa12.57□□□□□ -0.4
ABCA3-205ENST00000567910 ZNF287Q9HBT7 754 aa12.57□□□□□ -0.4
ABCA3-205ENST00000567910 FBXO28Q9NVF7 368 aa12.57□□□□□ -0.4
ABCA3-205ENST00000567910 CLIP2Q9UDT6 1046 aa12.57□□□□□ -0.4
ABCA3-205ENST00000567910 TSPY2A6NKD2 308 aa12.56□□□□□ -0.4
ABCA3-205ENST00000567910 SPDYE16A6NNV3 312 aaPredicted RBP12.56□□□□□ -0.4
ABCA3-205ENST00000567910 USP17L15C9J2P7 530 aa12.56□□□□□ -0.4
ABCA3-205ENST00000567910 USP17L13C9JLJ4 530 aa12.56□□□□□ -0.4
ABCA3-205ENST00000567910 USP17L11C9JVI0 530 aa12.56□□□□□ -0.4
ABCA3-205ENST00000567910 USP17L18D6R9N7 530 aa12.56□□□□□ -0.4
ABCA3-205ENST00000567910 USP17L22D6RA61 530 aa12.56□□□□□ -0.4
ABCA3-205ENST00000567910 USP17L17D6RBQ6 530 aa12.56□□□□□ -0.4
ABCA3-205ENST00000567910 USP17L19D6RCP7 530 aa12.56□□□□□ -0.4
ABCA3-205ENST00000567910 USP17L20D6RJB6 530 aa12.56□□□□□ -0.4
ABCA3-205ENST00000567910 F5H6K3 240 aa12.56□□□□□ -0.4
ABCA3-205ENST00000567910 RANBP6O60518 1105 aaKnown RBP12.56□□□□□ -0.4
ABCA3-205ENST00000567910 HMGB1P09429 215 aaKnown RBP12.56□□□□□ -0.4
ABCA3-205ENST00000567910 ANP32AP39687 249 aaKnown RBP12.56□□□□□ -0.4
ABCA3-205ENST00000567910 KLRC3Q07444 240 aa12.56□□□□□ -0.4
ABCA3-205ENST00000567910 USP17L24Q0WX57 530 aa12.56□□□□□ -0.4
ABCA3-205ENST00000567910 Q3C1V9 767 aa12.56□□□□□ -0.4
ABCA3-205ENST00000567910 ADCK5Q3MIX3 580 aa12.56□□□□□ -0.4
ABCA3-205ENST00000567910 TSGA10IPQ3SY00 556 aa12.56□□□□□ -0.4
ABCA3-205ENST00000567910 NCOA7Q8NI08 942 aa12.56□□□□□ -0.4
ABCA3-205ENST00000567910 SMCR8Q8TEV9 937 aaPredicted RBP12.56□□□□□ -0.4
ABCA3-205ENST00000567910 NEK1Q96PY6 1258 aa12.56□□□□□ -0.4
ABCA3-205ENST00000567910 UPF3BQ9BZI7 483 aaKnown RBP12.56□□□□□ -0.4
ABCA3-205ENST00000567910 KRT23Q9C075 422 aa12.56□□□□□ -0.4
ABCA3-205ENST00000567910 BTBD7Q9P203 1132 aa12.56□□□□□ -0.4
ABCA3-205ENST00000567910 MORF4L1Q9UBU8 362 aa12.56□□□□□ -0.4
ABCA3-205ENST00000567910 PNMA3Q9UL41 463 aa12.56□□□□□ -0.4
ABCA3-205ENST00000567910 CYP46A1Q9Y6A2 500 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms