RNA–Protein interactions for RNA: ENST00000567547.1

NEIL1-214, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 2

Gene NEIL1, Length 725 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-214ENST00000567547 DDX11Q96FC9 970 aa13.02□□□□□ -0.33
NEIL1-214ENST00000567547 CLIP2Q9UDT6 1046 aa13.02□□□□□ -0.33
NEIL1-214ENST00000567547 ZNF112Q9UJU3 913 aa13.02□□□□□ -0.33
NEIL1-214ENST00000567547 CNTNAP5Q8WYK1 1306 aa13.02□□□□□ -0.33
NEIL1-214ENST00000567547 PAPPA2Q9BXP8 1791 aa13.02□□□□□ -0.33
NEIL1-214ENST00000567547 MYH6P13533 1939 aa13.01□□□□□ -0.33
NEIL1-214ENST00000567547 POLR2AP24928 1970 aaKnown RBP13.01□□□□□ -0.33
NEIL1-214ENST00000567547 PALM3A6NDB9 673 aaPredicted RBP13.01□□□□□ -0.33
NEIL1-214ENST00000567547 POTECB2RU33 542 aa13.01□□□□□ -0.33
NEIL1-214ENST00000567547 CTNND1O60716 968 aaKnown RBP13.01□□□□□ -0.33
NEIL1-214ENST00000567547 DEXIO95424 95 aa13.01□□□□□ -0.33
NEIL1-214ENST00000567547 PARP1P09874 1014 aaKnown RBP13.01□□□□□ -0.33
NEIL1-214ENST00000567547 PDHBP11177 359 aa13.01□□□□□ -0.33
NEIL1-214ENST00000567547 EEF2P13639 858 aaKnown RBP13.01□□□□□ -0.33
NEIL1-214ENST00000567547 SSRP1Q08945 709 aaKnown RBP13.01□□□□□ -0.33
NEIL1-214ENST00000567547 ASPRV1Q53RT3 343 aa13.01□□□□□ -0.33
NEIL1-214ENST00000567547 LARP1BQ659C4 914 aaKnown RBP13.01□□□□□ -0.33
NEIL1-214ENST00000567547 NBPF11Q86T75 865 aa13.01□□□□□ -0.33
NEIL1-214ENST00000567547 CLEC10AQ8IUN9 316 aa13.01□□□□□ -0.33
NEIL1-214ENST00000567547 LRRC47Q8N1G4 583 aaKnown RBP13.01□□□□□ -0.33
NEIL1-214ENST00000567547 GMCL1P1Q8NEA9 526 aa13.01□□□□□ -0.33
NEIL1-214ENST00000567547 SH2D4AQ9H788 454 aa13.01□□□□□ -0.33
NEIL1-214ENST00000567547 ARHGEF10LQ9HCE6 1279 aa13.01□□□□□ -0.33
NEIL1-214ENST00000567547 MTMR6Q9Y217 621 aa13.01□□□□□ -0.33
NEIL1-214ENST00000567547 PRPF3O43395 683 aaKnown RBP13□□□□□ -0.33
NEIL1-214ENST00000567547 PLEKHA8P1O95397 391 aa13□□□□□ -0.33
NEIL1-214ENST00000567547 ZSCAN22P10073 491 aaPredicted RBP13□□□□□ -0.33
NEIL1-214ENST00000567547 JAG1P78504 1218 aa13□□□□□ -0.33
NEIL1-214ENST00000567547 PKP1Q13835 747 aa13□□□□□ -0.33
NEIL1-214ENST00000567547 SHROOM1Q2M3G4 852 aaPredicted RBP13□□□□□ -0.33
NEIL1-214ENST00000567547 GPATCH4Q5T3I0 446 aaKnown RBP13□□□□□ -0.33
NEIL1-214ENST00000567547 CLEC17AQ6ZS10 378 aa13□□□□□ -0.33
NEIL1-214ENST00000567547 KRT26Q7Z3Y9 468 aa13□□□□□ -0.33
NEIL1-214ENST00000567547 USP48Q86UV5 1035 aa13□□□□□ -0.33
NEIL1-214ENST00000567547 SIAH1Q8IUQ4 282 aa13□□□□□ -0.33
NEIL1-214ENST00000567547 DCAF4Q8WV16 495 aa13□□□□□ -0.33
NEIL1-214ENST00000567547 SPZ1Q9BXG8 430 aa13□□□□□ -0.33
NEIL1-214ENST00000567547 SLC26A6Q9BXS9 759 aa13□□□□□ -0.33
NEIL1-214ENST00000567547 MAD2L2Q9UI95 211 aa13□□□□□ -0.33
NEIL1-214ENST00000567547 SCAF8Q9UPN6 1271 aaKnown RBP13□□□□□ -0.33
NEIL1-214ENST00000567547 ZDHHC9Q9Y397 364 aa13□□□□□ -0.33
NEIL1-214ENST00000567547 ATP2B2Q01814 1243 aa12.99□□□□□ -0.33
NEIL1-214ENST00000567547 AKAP17AQ02040 695 aaKnown RBP12.99□□□□□ -0.33
NEIL1-214ENST00000567547 ZNF543Q08ER8 600 aa12.99□□□□□ -0.33
NEIL1-214ENST00000567547 NOL9Q5SY16 702 aaKnown RBP12.99□□□□□ -0.33
NEIL1-214ENST00000567547 SCYL3Q8IZE3 742 aa12.99□□□□□ -0.33
NEIL1-214ENST00000567547 FAM177A1Q8N128 213 aaPredicted RBP12.99□□□□□ -0.33
NEIL1-214ENST00000567547 SRBD1Q8N5C6 995 aaKnown RBP12.99□□□□□ -0.33
NEIL1-214ENST00000567547 PHKBQ93100 1093 aa12.99□□□□□ -0.33
NEIL1-214ENST00000567547 GMCL1Q96IK5 515 aa12.99□□□□□ -0.33
NEIL1-214ENST00000567547 C8orf76Q96K31 380 aa12.99□□□□□ -0.33
NEIL1-214ENST00000567547 TMX2Q9Y320 296 aa12.99□□□□□ -0.33
NEIL1-214ENST00000567547 VPS37CA5D8V6 355 aaPredicted RBP12.98□□□□□ -0.33
NEIL1-214ENST00000567547 ADM5C9JUS6 153 aa12.98□□□□□ -0.33
NEIL1-214ENST00000567547 H3BQV1 296 aa12.98□□□□□ -0.33
NEIL1-214ENST00000567547 F13A1P00488 732 aa12.98□□□□□ -0.33
NEIL1-214ENST00000567547 VEGFAP15692 232 aaPredicted RBP12.98□□□□□ -0.33
NEIL1-214ENST00000567547 NF2P35240 595 aa12.98□□□□□ -0.33
NEIL1-214ENST00000567547 IFFO2Q5TF58 517 aa12.98□□□□□ -0.33
NEIL1-214ENST00000567547 TNPO1Q92973 898 aaKnown RBP12.98□□□□□ -0.33
NEIL1-214ENST00000567547 KLRG1Q96E93 195 aa12.98□□□□□ -0.33
NEIL1-214ENST00000567547 ALG1Q9BT22 464 aa12.98□□□□□ -0.33
NEIL1-214ENST00000567547 ATP6V1DQ9Y5K8 247 aa12.98□□□□□ -0.33
NEIL1-214ENST00000567547 USP17L5A8MUK1 530 aa12.97□□□□□ -0.33
NEIL1-214ENST00000567547 KLRF2D3W0D1 207 aa12.97□□□□□ -0.33
NEIL1-214ENST00000567547 EAPPQ56P03 285 aaPredicted RBP12.97□□□□□ -0.33
NEIL1-214ENST00000567547 SLFN13Q68D06 897 aa12.97□□□□□ -0.33
NEIL1-214ENST00000567547 USP17L2Q6R6M4 530 aa12.97□□□□□ -0.33
NEIL1-214ENST00000567547 CDC37L1Q7L3B6 337 aa12.97□□□□□ -0.33
NEIL1-214ENST00000567547 STAG2Q8N3U4 1231 aa12.97□□□□□ -0.33
NEIL1-214ENST00000567547 FBXO18Q8NFZ0 1043 aa12.97□□□□□ -0.33
NEIL1-214ENST00000567547 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.97□□□□□ -0.33
NEIL1-214ENST00000567547 GBP4Q96PP9 640 aa12.97□□□□□ -0.33
NEIL1-214ENST00000567547 WRNIP1Q96S55 665 aa12.97□□□□□ -0.33
NEIL1-214ENST00000567547 GOPCQ9HD26 462 aa12.97□□□□□ -0.33
NEIL1-214ENST00000567547 OTOFQ9HC10 1997 aa12.97□□□□□ -0.33
NEIL1-214ENST00000567547 A0A1W2PRG0 241 aa12.96□□□□□ -0.33
NEIL1-214ENST00000567547 F5H6K3 240 aa12.96□□□□□ -0.33
NEIL1-214ENST00000567547 PPP1R12BO60237 982 aaPredicted RBP12.96□□□□□ -0.33
NEIL1-214ENST00000567547 DTNBO60941 627 aa12.96□□□□□ -0.33
NEIL1-214ENST00000567547 NDUFB10O96000 172 aa12.96□□□□□ -0.33
NEIL1-214ENST00000567547 XBP1P17861 261 aa12.96□□□□□ -0.33
NEIL1-214ENST00000567547 INPP5BP32019 993 aa12.96□□□□□ -0.33
NEIL1-214ENST00000567547 SLC1A4P43007 532 aa12.96□□□□□ -0.33
NEIL1-214ENST00000567547 KLRC3Q07444 240 aa12.96□□□□□ -0.33
NEIL1-214ENST00000567547 TRIM29Q14134 588 aa12.96□□□□□ -0.33
NEIL1-214ENST00000567547 PKN1Q16512 942 aa12.96□□□□□ -0.33
NEIL1-214ENST00000567547 PFKFB3Q16875 520 aaPredicted RBP12.96□□□□□ -0.33
NEIL1-214ENST00000567547 CCDC96Q2M329 555 aa12.96□□□□□ -0.33
NEIL1-214ENST00000567547 PRAMEF18Q5VWM3 479 aa12.96□□□□□ -0.33
NEIL1-214ENST00000567547 CDCA5Q96FF9 252 aa12.96□□□□□ -0.33
NEIL1-214ENST00000567547 WDR18Q9BV38 432 aa12.96□□□□□ -0.33
NEIL1-214ENST00000567547 KIAA1683Q9H0B3 1180 aa12.96□□□□□ -0.33
NEIL1-214ENST00000567547 ZSCAN16Q9H4T2 348 aaPredicted RBP12.96□□□□□ -0.33
NEIL1-214ENST00000567547 RIOX1Q9H6W3 641 aa12.96□□□□□ -0.33
NEIL1-214ENST00000567547 VCPKMTQ9H867 229 aa12.96□□□□□ -0.33
NEIL1-214ENST00000567547 AS3MTQ9HBK9 375 aa12.96□□□□□ -0.33
NEIL1-214ENST00000567547 PICK1Q9NRD5 415 aa12.96□□□□□ -0.33
NEIL1-214ENST00000567547 MTMR7Q9Y216 660 aa12.96□□□□□ -0.33
NEIL1-214ENST00000567547 PHIPQ8WWQ0 1821 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms