RNA–Protein interactions for RNA: ENST00000567138.2

SPG7-216, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 1,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-216ENST00000567138 MAFAQ8NHW3 353 aaPredicted RBP13.73□□□□□ -0.21
SPG7-216ENST00000567138 RPAP3Q9H6T3 665 aaPredicted RBP13.73□□□□□ -0.21
SPG7-216ENST00000567138 BAZ2AQ9UIF9 1905 aaKnown RBP13.73□□□□□ -0.21
SPG7-216ENST00000567138 VCANP13611 3396 aa13.72□□□□□ -0.21
SPG7-216ENST00000567138 KBTBD13C9JR72 458 aa13.72□□□□□ -0.21
SPG7-216ENST00000567138 USP14P54578 494 aa13.72□□□□□ -0.21
SPG7-216ENST00000567138 ABCB5Q2M3G0 1257 aa13.72□□□□□ -0.21
SPG7-216ENST00000567138 TRIM60Q495X7 471 aa13.72□□□□□ -0.21
SPG7-216ENST00000567138 TATDN1Q6P1N9 297 aa13.72□□□□□ -0.21
SPG7-216ENST00000567138 MYLIPQ8WY64 445 aa13.72□□□□□ -0.21
SPG7-216ENST00000567138 FRAT1Q92837 279 aaPredicted RBP13.72□□□□□ -0.21
SPG7-216ENST00000567138 KIAA1683Q9H0B3 1180 aa13.72□□□□□ -0.21
SPG7-216ENST00000567138 TLR7Q9NYK1 1049 aaKnown RBP13.72□□□□□ -0.21
SPG7-216ENST00000567138 SERPINB13Q9UIV8 391 aa13.72□□□□□ -0.21
SPG7-216ENST00000567138 IDH1O75874 414 aaKnown RBP13.71□□□□□ -0.21
SPG7-216ENST00000567138 TRIM27P14373 513 aa13.71□□□□□ -0.21
SPG7-216ENST00000567138 CERKLQ49MI3 558 aaPredicted RBP13.71□□□□□ -0.21
SPG7-216ENST00000567138 LBX2Q6XYB7 198 aa13.71□□□□□ -0.21
SPG7-216ENST00000567138 SLC39A5Q6ZMH5 540 aa13.71□□□□□ -0.21
SPG7-216ENST00000567138 BADQ92934 168 aa13.71□□□□□ -0.21
SPG7-216ENST00000567138 CLUAP1Q96AJ1 413 aa13.71□□□□□ -0.21
SPG7-216ENST00000567138 SEMA6BQ9H3T3 888 aa13.71□□□□□ -0.21
SPG7-216ENST00000567138 GPR108Q9NPR9 543 aa13.71□□□□□ -0.21
SPG7-216ENST00000567138 IGHA2P01877 340 aa13.71□□□□□ -0.22
SPG7-216ENST00000567138 ADORA2AP29274 412 aa13.71□□□□□ -0.22
SPG7-216ENST00000567138 SH3RF1Q7Z6J0 888 aa13.71□□□□□ -0.22
SPG7-216ENST00000567138 DPP9Q86TI2 863 aa13.71□□□□□ -0.22
SPG7-216ENST00000567138 MAGEB6Q8N7X4 407 aa13.71□□□□□ -0.22
SPG7-216ENST00000567138 MOV10L1Q9BXT6 1211 aaKnown RBP13.71□□□□□ -0.22
SPG7-216ENST00000567138 EHD4Q9H223 541 aa13.71□□□□□ -0.22
SPG7-216ENST00000567138 TTYH1Q9H313 450 aaPredicted RBP13.71□□□□□ -0.22
SPG7-216ENST00000567138 CABP5Q9NP86 173 aa13.71□□□□□ -0.22
SPG7-216ENST00000567138 PDLIM7Q9NR12 457 aa13.71□□□□□ -0.22
SPG7-216ENST00000567138 DBNLQ9UJU6 430 aaKnown RBP13.71□□□□□ -0.22
SPG7-216ENST00000567138 SPTBN5Q9NRC6 3674 aaKnown RBP13.7□□□□□ -0.22
SPG7-216ENST00000567138 TTC28Q96AY4 2481 aa13.7□□□□□ -0.22
SPG7-216ENST00000567138 GUCY1A2P33402 732 aa13.7□□□□□ -0.22
SPG7-216ENST00000567138 SHMT1P34896 483 aa13.7□□□□□ -0.22
SPG7-216ENST00000567138 POLA2Q14181 598 aa13.7□□□□□ -0.22
SPG7-216ENST00000567138 ZKSCAN2Q63HK3 967 aa13.7□□□□□ -0.22
SPG7-216ENST00000567138 ARRDC4Q8NCT1 418 aa13.7□□□□□ -0.22
SPG7-216ENST00000567138 FERMT2Q96AC1 680 aa13.7□□□□□ -0.22
SPG7-216ENST00000567138 TANGO6Q9C0B7 1094 aa13.7□□□□□ -0.22
SPG7-216ENST00000567138 CCDC8Q9H0W5 538 aaPredicted RBP13.7□□□□□ -0.22
SPG7-216ENST00000567138 CDH23Q9H251 3354 aa13.69□□□□□ -0.22
SPG7-216ENST00000567138 MYO9BQ13459 2157 aa13.69□□□□□ -0.22
SPG7-216ENST00000567138 TRIM43BA6NCK2 446 aa13.69□□□□□ -0.22
SPG7-216ENST00000567138 COBLO75128 1261 aa13.69□□□□□ -0.22
SPG7-216ENST00000567138 FOSL2P15408 326 aa13.69□□□□□ -0.22
SPG7-216ENST00000567138 ADCYAP1R1P41586 468 aa13.69□□□□□ -0.22
SPG7-216ENST00000567138 PLCD1P51178 756 aa13.69□□□□□ -0.22
SPG7-216ENST00000567138 EVX2Q03828 476 aa13.69□□□□□ -0.22
SPG7-216ENST00000567138 SEPT2Q15019 361 aa13.69□□□□□ -0.22
SPG7-216ENST00000567138 SNX17Q15036 470 aa13.69□□□□□ -0.22
SPG7-216ENST00000567138 FAM47AQ5JRC9 791 aa13.69□□□□□ -0.22
SPG7-216ENST00000567138 PRAMEF19Q5SWL8 479 aa13.69□□□□□ -0.22
SPG7-216ENST00000567138 OLFML2BQ68BL8 750 aa13.69□□□□□ -0.22
SPG7-216ENST00000567138 TTC6Q86TZ1 520 aa13.69□□□□□ -0.22
SPG7-216ENST00000567138 TRIM43Q96BQ3 446 aaPredicted RBP13.69□□□□□ -0.22
SPG7-216ENST00000567138 ZNF512BQ96KM6 892 aaPredicted RBP13.69□□□□□ -0.22
SPG7-216ENST00000567138 C1orf115Q9H7X2 142 aa13.69□□□□□ -0.22
SPG7-216ENST00000567138 MCM3APO60318 1980 aa13.68□□□□□ -0.22
SPG7-216ENST00000567138 MYH7P12883 1935 aa13.68□□□□□ -0.22
SPG7-216ENST00000567138 A0A1W2PRG0 241 aa13.68□□□□□ -0.22
SPG7-216ENST00000567138 SEPT4O43236 478 aa13.68□□□□□ -0.22
SPG7-216ENST00000567138 SURF6O75683 361 aaKnown RBP13.68□□□□□ -0.22
SPG7-216ENST00000567138 ERCC3P19447 782 aa13.68□□□□□ -0.22
SPG7-216ENST00000567138 SMAD3P84022 425 aaKnown RBP13.68□□□□□ -0.22
SPG7-216ENST00000567138 LRRC41Q15345 812 aa13.68□□□□□ -0.22
SPG7-216ENST00000567138 TMEM57Q8N5G2 664 aa13.68□□□□□ -0.22
SPG7-216ENST00000567138 SPATC1LQ9H0A9 340 aa13.68□□□□□ -0.22
SPG7-216ENST00000567138 ANTXR1Q9H6X2 564 aa13.68□□□□□ -0.22
SPG7-216ENST00000567138 GBF1Q92538 1859 aa13.67□□□□□ -0.22
SPG7-216ENST00000567138 MPHOSPH10O00566 681 aaKnown RBP13.67□□□□□ -0.22
SPG7-216ENST00000567138 IGSF3O75054 1194 aa13.67□□□□□ -0.22
SPG7-216ENST00000567138 POLR3DP05423 398 aaPredicted RBP13.67□□□□□ -0.22
SPG7-216ENST00000567138 PLS1Q14651 629 aa13.67□□□□□ -0.22
SPG7-216ENST00000567138 SSH3Q8TE77 659 aa13.67□□□□□ -0.22
SPG7-216ENST00000567138 STRNO43815 780 aa13.66□□□□□ -0.22
SPG7-216ENST00000567138 ITGB8P26012 769 aa13.66□□□□□ -0.22
SPG7-216ENST00000567138 TLE2Q04725 743 aa13.66□□□□□ -0.22
SPG7-216ENST00000567138 COG2Q14746 738 aa13.66□□□□□ -0.22
SPG7-216ENST00000567138 KIAA1755Q5JYT7 1200 aa13.66□□□□□ -0.22
SPG7-216ENST00000567138 NCAPG2Q86XI2 1143 aa13.66□□□□□ -0.22
SPG7-216ENST00000567138 CERS3Q8IU89 383 aa13.66□□□□□ -0.22
SPG7-216ENST00000567138 CLEC10AQ8IUN9 316 aa13.66□□□□□ -0.22
SPG7-216ENST00000567138 SHCBP1Q8NEM2 672 aa13.66□□□□□ -0.22
SPG7-216ENST00000567138 EAF2Q96CJ1 260 aaPredicted RBP13.66□□□□□ -0.22
SPG7-216ENST00000567138 RNPC3Q96LT9 517 aaKnown RBP13.66□□□□□ -0.22
SPG7-216ENST00000567138 PRDM6Q9NQX0 595 aa13.66□□□□□ -0.22
SPG7-216ENST00000567138 EPHB4P54760 987 aa13.65□□□□□ -0.22
SPG7-216ENST00000567138 ATP8B2P98198 1209 aa13.65□□□□□ -0.22
SPG7-216ENST00000567138 GABPAQ06546 454 aa13.65□□□□□ -0.22
SPG7-216ENST00000567138 MAP3K12Q12852 859 aa13.65□□□□□ -0.22
SPG7-216ENST00000567138 SLC44A5Q8NCS7 719 aa13.65□□□□□ -0.22
SPG7-216ENST00000567138 ATG4CQ96DT6 458 aa13.65□□□□□ -0.22
SPG7-216ENST00000567138 MAML3Q96JK9 1138 aa13.65□□□□□ -0.22
SPG7-216ENST00000567138 RIOK1Q9BRS2 568 aaKnown RBP13.65□□□□□ -0.22
SPG7-216ENST00000567138 MAGEB6P1A0A0J9YX57 407 aa13.64□□□□□ -0.23
SPG7-216ENST00000567138 CLTBP09497 229 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms