RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 C2CD5Q86YS7 1000 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 DCPSQ96C86 337 aaKnown RBP6.91□□□□□ -1.3
CDH13-209ENST00000567109 ORC3Q9UBD5 711 aaPredicted RBP6.91□□□□□ -1.3
CDH13-209ENST00000567109 ZBTB7BO15156 539 aaPredicted RBP6.91□□□□□ -1.3
CDH13-209ENST00000567109 PARP1P09874 1014 aaKnown RBP6.91□□□□□ -1.3
CDH13-209ENST00000567109 MCM7P33993 719 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 MTX1Q13505 466 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 SLFNL1Q499Z3 407 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 SND1Q7KZF4 910 aaKnown RBP eCLIP6.91□□□□□ -1.3
CDH13-209ENST00000567109 TBC1D22AQ8WUA7 517 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 SEC62Q99442 399 aaKnown RBP6.91□□□□□ -1.3
CDH13-209ENST00000567109 ZNF277Q9NRM2 450 aaPredicted RBP6.91□□□□□ -1.3
CDH13-209ENST00000567109 RTEL1Q9NZ71 1219 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 BICDL2A1A5D9 508 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 NEURL1BA8MQ27 555 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 KIF3CO14782 793 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 ZBED4O75132 1171 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 GNAT2P19087 354 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 DNAJC21Q5F1R6 531 aaKnown RBP6.91□□□□□ -1.3
CDH13-209ENST00000567109 ZNF449Q6P9G9 518 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 ELMSAN1Q6PJG2 1045 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 ACRBPQ8NEB7 543 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 JARID2Q92833 1246 aaPredicted RBP6.91□□□□□ -1.3
CDH13-209ENST00000567109 CHMP6Q96FZ7 201 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 CIAO1O76071 339 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 KRT19P08727 400 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 CNPY4Q8N129 248 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 SSH3Q8TE77 659 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 MYCBPQ99417 103 aaPredicted RBP6.91□□□□□ -1.3
CDH13-209ENST00000567109 ALG1Q9BT22 464 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 NUF2Q9BZD4 464 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 MED4Q9NPJ6 270 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 STK24Q9Y6E0 443 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 SPDYE2BA6NHP3 402 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 CHMP2AO43633 222 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 SPDYE6P0CI01 402 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 SKIV2LQ15477 1246 aaKnown RBP6.91□□□□□ -1.3
CDH13-209ENST00000567109 SLC15A2Q16348 729 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 XPAP23025 273 aaPredicted RBP6.91□□□□□ -1.3
CDH13-209ENST00000567109 ITGA6P23229 1130 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 TSTA3Q13630 321 aaPredicted RBP6.91□□□□□ -1.3
CDH13-209ENST00000567109 SH2D4BQ5SQS7 431 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 CLEC17AQ6ZS10 378 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 PPFIBP2Q8ND30 876 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 KCNG4Q8TDN1 519 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 SUCLG2Q96I99 432 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 NOX5Q96PH1 765 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 GCNAQ96QF7 691 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 GPCPD1Q9NPB8 672 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 KCNK9Q9NPC2 374 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 MTUS1Q9ULD2 1270 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 RGS12O14924 1447 aa6.91□□□□□ -1.3
CDH13-209ENST00000567109 PLSCR1O15162 318 aa6.9□□□□□ -1.3
CDH13-209ENST00000567109 CCNT1O60563 726 aaKnown RBP6.9□□□□□ -1.3
CDH13-209ENST00000567109 MAP7Q14244 749 aa6.9□□□□□ -1.3
CDH13-209ENST00000567109 SEL1L2Q5TEA6 688 aa6.9□□□□□ -1.3
CDH13-209ENST00000567109 KRT79Q5XKE5 535 aa6.9□□□□□ -1.3
CDH13-209ENST00000567109 GPR161Q8N6U8 529 aaKnown RBP6.9□□□□□ -1.3
CDH13-209ENST00000567109 COL15A1P39059 1388 aa6.9□□□□□ -1.3
CDH13-209ENST00000567109 DDX39AO00148 427 aaKnown RBP6.9□□□□□ -1.3
CDH13-209ENST00000567109 MNAT1P51948 309 aa6.9□□□□□ -1.3
CDH13-209ENST00000567109 UBASH3AP57075 661 aa6.9□□□□□ -1.3
CDH13-209ENST00000567109 MAEAQ7L5Y9 396 aa6.9□□□□□ -1.3
CDH13-209ENST00000567109 HDXQ7Z353 690 aa6.9□□□□□ -1.3
CDH13-209ENST00000567109 ZBTB38Q8NAP3 1195 aaPredicted RBP6.9□□□□□ -1.3
CDH13-209ENST00000567109 ATRIPQ8WXE1 791 aa6.9□□□□□ -1.3
CDH13-209ENST00000567109 NEK1Q96PY6 1258 aa6.9□□□□□ -1.3
CDH13-209ENST00000567109 TSGA10Q9BZW7 698 aa6.9□□□□□ -1.3
CDH13-209ENST00000567109 IFRD2Q12894 506 aaPredicted RBP6.9□□□□□ -1.3
CDH13-209ENST00000567109 CCDC129Q6ZRS4 1044 aa6.9□□□□□ -1.3
CDH13-209ENST00000567109 LPIN2Q92539 896 aa6.9□□□□□ -1.3
CDH13-209ENST00000567109 LARP6Q9BRS8 491 aaKnown RBP6.9□□□□□ -1.3
CDH13-209ENST00000567109 ADGRB2O60241 1585 aa6.9□□□□□ -1.3
CDH13-209ENST00000567109 CTAGE9A4FU28 777 aa6.9□□□□□ -1.3
CDH13-209ENST00000567109 ERCC3P19447 782 aa6.9□□□□□ -1.3
CDH13-209ENST00000567109 ITKQ08881 620 aa6.9□□□□□ -1.3
CDH13-209ENST00000567109 SLC12A2P55011 1212 aa6.9□□□□□ -1.31
CDH13-209ENST00000567109 C10orf67Q8IYJ2 551 aa6.9□□□□□ -1.31
CDH13-209ENST00000567109 OLA1Q9NTK5 396 aaKnown RBP6.9□□□□□ -1.31
CDH13-209ENST00000567109 FNDC3AQ9Y2H6 1198 aaKnown RBP6.9□□□□□ -1.31
CDH13-209ENST00000567109 CROCCQ5TZA2 2017 aa6.9□□□□□ -1.31
CDH13-209ENST00000567109 UFL1O94874 794 aa6.9□□□□□ -1.31
CDH13-209ENST00000567109 MYCP01106 439 aaPredicted RBP6.9□□□□□ -1.31
CDH13-209ENST00000567109 RPL13P26373 211 aaKnown RBP6.9□□□□□ -1.31
CDH13-209ENST00000567109 BRD3Q15059 726 aa6.9□□□□□ -1.31
CDH13-209ENST00000567109 RPS6KA2Q15349 733 aa6.9□□□□□ -1.31
CDH13-209ENST00000567109 DPP8Q6V1X1 898 aaPredicted RBP6.9□□□□□ -1.31
CDH13-209ENST00000567109 NBPF11Q86T75 865 aa6.9□□□□□ -1.31
CDH13-209ENST00000567109 RICTORQ6R327 1708 aa6.9□□□□□ -1.31
CDH13-209ENST00000567109 HIBADHP31937 336 aaKnown RBP6.9□□□□□ -1.31
CDH13-209ENST00000567109 LIN9Q5TKA1 542 aa6.9□□□□□ -1.31
CDH13-209ENST00000567109 ARMC9Q7Z3E5 817 aa6.9□□□□□ -1.31
CDH13-209ENST00000567109 GANCQ8TET4 914 aa6.9□□□□□ -1.31
CDH13-209ENST00000567109 ISCA1Q9BUE6 129 aa6.9□□□□□ -1.31
CDH13-209ENST00000567109 ATP10DQ9P241 1426 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 RAPGEF1Q13905 1077 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 PUM3Q15397 648 aaKnown RBP6.89□□□□□ -1.31
CDH13-209ENST00000567109 SDCCAG8Q86SQ7 713 aaPredicted RBP6.89□□□□□ -1.31
CDH13-209ENST00000567109 CCDC170Q8IYT3 715 aa6.89□□□□□ -1.31
CDH13-209ENST00000567109 RPS6KC1Q96S38 1066 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms