RNA–Protein interactions for RNA: ENST00000566723.1

SMPD3-208, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-208ENST00000566723 PAWRQ96IZ0 340 aaKnown RBP18.28■□□□□ 0.52
SMPD3-208ENST00000566723 PUS7LQ9H0K6 701 aaKnown RBP18.28■□□□□ 0.52
SMPD3-208ENST00000566723 BTBD7Q9P203 1132 aa18.28■□□□□ 0.52
SMPD3-208ENST00000566723 SLC4A4Q9Y6R1 1079 aa18.28■□□□□ 0.52
SMPD3-208ENST00000566723 CDK8P49336 464 aa18.27■□□□□ 0.52
SMPD3-208ENST00000566723 FXR1P51114 621 aaKnown RBP eCLIP18.27■□□□□ 0.52
SMPD3-208ENST00000566723 MAP2K5Q13163 448 aa18.27■□□□□ 0.52
SMPD3-208ENST00000566723 CCL14Q16627 93 aa18.27■□□□□ 0.52
SMPD3-208ENST00000566723 CHRDL2Q6WN34 429 aa18.27■□□□□ 0.52
SMPD3-208ENST00000566723 NECAB2Q7Z6G3 386 aa18.27■□□□□ 0.52
SMPD3-208ENST00000566723 CLEC10AQ8IUN9 316 aa18.27■□□□□ 0.52
SMPD3-208ENST00000566723 CCDC17Q96LX7 622 aa18.27■□□□□ 0.52
SMPD3-208ENST00000566723 TANGO6Q9C0B7 1094 aa18.27■□□□□ 0.52
SMPD3-208ENST00000566723 SH2D4AQ9H788 454 aa18.27■□□□□ 0.52
SMPD3-208ENST00000566723 ARHGEF10LQ9HCE6 1279 aa18.27■□□□□ 0.52
SMPD3-208ENST00000566723 ZNFX1Q9P2E3 1918 aaKnown RBP18.27■□□□□ 0.51
SMPD3-208ENST00000566723 MYH4Q9Y623 1939 aa18.26■□□□□ 0.51
SMPD3-208ENST00000566723 SMIM22K7EJ46 135 aa18.26■□□□□ 0.51
SMPD3-208ENST00000566723 EVI5O60447 810 aa18.26■□□□□ 0.51
SMPD3-208ENST00000566723 COG2Q14746 738 aa18.26■□□□□ 0.51
SMPD3-208ENST00000566723 WDR78Q5VTH9 848 aa18.26■□□□□ 0.51
SMPD3-208ENST00000566723 KBTBD3Q8NAB2 608 aa18.26■□□□□ 0.51
SMPD3-208ENST00000566723 LPAR1Q92633 364 aa18.26■□□□□ 0.51
SMPD3-208ENST00000566723 ARPP21Q9UBL0 812 aaPredicted RBP18.26■□□□□ 0.51
SMPD3-208ENST00000566723 OGDHLQ9ULD0 1010 aa18.26■□□□□ 0.51
SMPD3-208ENST00000566723 IVNS1ABPQ9Y6Y0 642 aa18.26■□□□□ 0.51
SMPD3-208ENST00000566723 SLC15A5A6NIM6 579 aa18.25■□□□□ 0.51
SMPD3-208ENST00000566723 PTPREP23469 700 aa18.25■□□□□ 0.51
SMPD3-208ENST00000566723 CACNB2Q08289 660 aaPredicted RBP18.25■□□□□ 0.51
SMPD3-208ENST00000566723 GRB14Q14449 540 aa18.25■□□□□ 0.51
SMPD3-208ENST00000566723 KIAA1755Q5JYT7 1200 aa18.25■□□□□ 0.51
SMPD3-208ENST00000566723 TSHZ3Q63HK5 1081 aa18.25■□□□□ 0.51
SMPD3-208ENST00000566723 CTR9Q6PD62 1173 aa18.25■□□□□ 0.51
SMPD3-208ENST00000566723 TMX2Q9Y320 296 aa18.25■□□□□ 0.51
SMPD3-208ENST00000566723 MNX1P50219 401 aaPredicted RBP18.24■□□□□ 0.51
SMPD3-208ENST00000566723 SIAH1Q8IUQ4 282 aa18.24■□□□□ 0.51
SMPD3-208ENST00000566723 MB21D1Q8N884 522 aa18.24■□□□□ 0.51
SMPD3-208ENST00000566723 STRBPQ96SI9 672 aaKnown RBP18.24■□□□□ 0.51
SMPD3-208ENST00000566723 NBPF3Q9H094 633 aa18.24■□□□□ 0.51
SMPD3-208ENST00000566723 VCPKMTQ9H867 229 aa18.24■□□□□ 0.51
SMPD3-208ENST00000566723 HOXC10Q9NYD6 342 aa18.24■□□□□ 0.51
SMPD3-208ENST00000566723 SZT2Q5T011 3432 aa18.24■□□□□ 0.51
SMPD3-208ENST00000566723 ROBO3Q96MS0 1386 aa18.23■□□□□ 0.51
SMPD3-208ENST00000566723 HOXC6P09630 235 aa18.23■□□□□ 0.51
SMPD3-208ENST00000566723 CCND3P30281 292 aaPredicted RBP18.23■□□□□ 0.51
SMPD3-208ENST00000566723 SPICE1Q8N0Z3 855 aa18.23■□□□□ 0.51
SMPD3-208ENST00000566723 APPBP2Q92624 585 aa18.23■□□□□ 0.51
SMPD3-208ENST00000566723 SPATC1LQ9H0A9 340 aa18.23■□□□□ 0.51
SMPD3-208ENST00000566723 PCDHB15Q9Y5E8 787 aa18.23■□□□□ 0.51
SMPD3-208ENST00000566723 PLXNA1Q9UIW2 1896 aa18.22■□□□□ 0.51
SMPD3-208ENST00000566723 WDR46O15213 610 aaKnown RBP18.22■□□□□ 0.51
SMPD3-208ENST00000566723 RNF113AO15541 343 aaKnown RBP18.22■□□□□ 0.51
SMPD3-208ENST00000566723 FLOT1O75955 427 aa18.22■□□□□ 0.51
SMPD3-208ENST00000566723 ZFYP08048 801 aaPredicted RBP18.22■□□□□ 0.51
SMPD3-208ENST00000566723 DSG3P32926 999 aa18.22■□□□□ 0.51
SMPD3-208ENST00000566723 SBK1Q52WX2 424 aa18.22■□□□□ 0.51
SMPD3-208ENST00000566723 MFSD14CQ5VZR4 134 aa18.22■□□□□ 0.51
SMPD3-208ENST00000566723 GIMAP6Q6P9H5 292 aa18.22■□□□□ 0.51
SMPD3-208ENST00000566723 SHCBP1Q8NEM2 672 aa18.22■□□□□ 0.51
SMPD3-208ENST00000566723 OSBP2Q969R2 916 aa18.22■□□□□ 0.51
SMPD3-208ENST00000566723 MOV10L1Q9BXT6 1211 aaKnown RBP18.22■□□□□ 0.51
SMPD3-208ENST00000566723 PRO3102Q9H379 93 aa18.22■□□□□ 0.51
SMPD3-208ENST00000566723 C11orf49Q9H6J7 331 aa18.22■□□□□ 0.51
SMPD3-208ENST00000566723 FLRT1Q9NZU1 646 aa18.22■□□□□ 0.51
SMPD3-208ENST00000566723 RBM27Q9P2N5 1060 aaKnown RBP18.22■□□□□ 0.51
SMPD3-208ENST00000566723 TTC41PQ6P2S7 1318 aa18.22■□□□□ 0.51
SMPD3-208ENST00000566723 DNAH12Q6ZR08 3092 aa18.21■□□□□ 0.51
SMPD3-208ENST00000566723 GSG1L2A8MUP6 293 aa18.21■□□□□ 0.51
SMPD3-208ENST00000566723 EEF2P13639 858 aaKnown RBP18.21■□□□□ 0.51
SMPD3-208ENST00000566723 RRP1P56182 461 aaKnown RBP18.21■□□□□ 0.51
SMPD3-208ENST00000566723 KANSL2Q9H9L4 492 aa18.21■□□□□ 0.51
SMPD3-208ENST00000566723 LAMA3Q16787 3333 aa18.21■□□□□ 0.51
SMPD3-208ENST00000566723 ERC2O15083 957 aa18.2■□□□□ 0.5
SMPD3-208ENST00000566723 GPAA1O43292 621 aa18.2■□□□□ 0.5
SMPD3-208ENST00000566723 ERCC3P19447 782 aa18.2■□□□□ 0.5
SMPD3-208ENST00000566723 ATP2B2Q01814 1243 aa18.2■□□□□ 0.5
SMPD3-208ENST00000566723 LHX8Q68G74 356 aa18.2■□□□□ 0.5
SMPD3-208ENST00000566723 NPLOC4Q8TAT6 608 aa18.2■□□□□ 0.5
SMPD3-208ENST00000566723 ATG4CQ96DT6 458 aa18.2■□□□□ 0.5
SMPD3-208ENST00000566723 GOPCQ9HD26 462 aa18.2■□□□□ 0.5
SMPD3-208ENST00000566723 PFASO15067 1338 aa18.2■□□□□ 0.5
SMPD3-208ENST00000566723 M0R2C6 588 aa18.19■□□□□ 0.5
SMPD3-208ENST00000566723 STRNO43815 780 aa18.19■□□□□ 0.5
SMPD3-208ENST00000566723 GNAT2P19087 354 aa18.19■□□□□ 0.5
SMPD3-208ENST00000566723 ADORA2AP29274 412 aa18.19■□□□□ 0.5
SMPD3-208ENST00000566723 LRRFIP1Q32MZ4 808 aaKnown RBP18.19■□□□□ 0.5
SMPD3-208ENST00000566723 C7orf61Q8IZ16 206 aa18.19■□□□□ 0.5
SMPD3-208ENST00000566723 PI4K2BQ8TCG2 481 aa18.19■□□□□ 0.5
SMPD3-208ENST00000566723 EPB41L4AQ9HCS5 686 aaPredicted RBP18.19■□□□□ 0.5
SMPD3-208ENST00000566723 RASA1P20936 1047 aa18.18■□□□□ 0.5
SMPD3-208ENST00000566723 PLS1Q14651 629 aa18.18■□□□□ 0.5
SMPD3-208ENST00000566723 SAMD1Q6SPF0 538 aaPredicted RBP18.18■□□□□ 0.5
SMPD3-208ENST00000566723 DPP9Q86TI2 863 aa18.18■□□□□ 0.5
SMPD3-208ENST00000566723 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.18■□□□□ 0.5
SMPD3-208ENST00000566723 MROH8Q9H579 483 aa18.18■□□□□ 0.5
SMPD3-208ENST00000566723 MINDY4BA8MYZ0 360 aa18.17■□□□□ 0.5
SMPD3-208ENST00000566723 MSCO60682 206 aa18.17■□□□□ 0.5
SMPD3-208ENST00000566723 IGHA2P01877 340 aa18.17■□□□□ 0.5
SMPD3-208ENST00000566723 COL6A1P12109 1028 aa18.17■□□□□ 0.5
SMPD3-208ENST00000566723 CYP2C19P33261 490 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms