RNA–Protein interactions for RNA: ENST00000566498.1

CCDC113-204, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-204ENST00000566498 Q3C1V9 767 aa23■■□□□ 1.27
CCDC113-204ENST00000566498 VPS53Q5VIR6 699 aa23■■□□□ 1.27
CCDC113-204ENST00000566498 LPAR1Q92633 364 aa23■■□□□ 1.27
CCDC113-204ENST00000566498 VCPKMTQ9H867 229 aa23■■□□□ 1.27
CCDC113-204ENST00000566498 HOXC10Q9NYD6 342 aa23■■□□□ 1.27
CCDC113-204ENST00000566498 ERVK-9P63128 1117 aa22.99■■□□□ 1.27
CCDC113-204ENST00000566498 ERVK-24P63145 666 aa22.99■■□□□ 1.27
CCDC113-204ENST00000566498 COG2Q14746 738 aa22.99■■□□□ 1.27
CCDC113-204ENST00000566498 KIAA1755Q5JYT7 1200 aa22.99■■□□□ 1.27
CCDC113-204ENST00000566498 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.99■■□□□ 1.27
CCDC113-204ENST00000566498 CWC22Q9HCG8 908 aaKnown RBP22.99■■□□□ 1.27
CCDC113-204ENST00000566498 GOPCQ9HD26 462 aa22.99■■□□□ 1.27
CCDC113-204ENST00000566498 RABGAP1Q9Y3P9 1069 aa22.99■■□□□ 1.27
CCDC113-204ENST00000566498 ROBO3Q96MS0 1386 aa22.99■■□□□ 1.27
CCDC113-204ENST00000566498 ADCY3O60266 1144 aa22.98■■□□□ 1.27
CCDC113-204ENST00000566498 PDE4AP27815 886 aa22.98■■□□□ 1.27
CCDC113-204ENST00000566498 SAMD1Q6SPF0 538 aaPredicted RBP22.98■■□□□ 1.27
CCDC113-204ENST00000566498 DIAPH3Q9NSV4 1193 aa22.98■■□□□ 1.27
CCDC113-204ENST00000566498 HTTP42858 3142 aa22.98■■□□□ 1.27
CCDC113-204ENST00000566498 CENPFP49454 3210 aa22.98■■□□□ 1.27
CCDC113-204ENST00000566498 POTEFA5A3E0 1075 aa22.97■■□□□ 1.27
CCDC113-204ENST00000566498 TSPY3P0CV98 308 aa22.97■■□□□ 1.27
CCDC113-204ENST00000566498 TSPY8P0CW00 308 aa22.97■■□□□ 1.27
CCDC113-204ENST00000566498 MFAP1P55081 439 aaKnown RBP22.97■■□□□ 1.27
CCDC113-204ENST00000566498 CTDSPL2Q05D32 466 aa22.97■■□□□ 1.27
CCDC113-204ENST00000566498 CWC27Q6UX04 472 aaKnown RBP22.97■■□□□ 1.27
CCDC113-204ENST00000566498 CLIP2Q9UDT6 1046 aa22.97■■□□□ 1.27
CCDC113-204ENST00000566498 HIP1O00291 1037 aa22.96■■□□□ 1.27
CCDC113-204ENST00000566498 FOXP2O15409 715 aa22.96■■□□□ 1.27
CCDC113-204ENST00000566498 FGAP02671 866 aa22.96■■□□□ 1.27
CCDC113-204ENST00000566498 MAPK4P31152 587 aa22.96■■□□□ 1.27
CCDC113-204ENST00000566498 CCNA1P78396 465 aa22.96■■□□□ 1.27
CCDC113-204ENST00000566498 TFAP4Q01664 338 aa22.96■■□□□ 1.27
CCDC113-204ENST00000566498 ALX1Q15699 326 aa22.96■■□□□ 1.27
CCDC113-204ENST00000566498 FAM47AQ5JRC9 791 aa22.96■■□□□ 1.27
CCDC113-204ENST00000566498 POTEEQ6S8J3 1075 aa22.96■■□□□ 1.27
CCDC113-204ENST00000566498 SLAIN1Q8ND83 568 aa22.96■■□□□ 1.27
CCDC113-204ENST00000566498 NYAP2Q9P242 653 aa22.96■■□□□ 1.27
CCDC113-204ENST00000566498 DOCK3Q8IZD9 2030 aa22.96■■□□□ 1.27
CCDC113-204ENST00000566498 FLOT1O75955 427 aa22.95■■□□□ 1.26
CCDC113-204ENST00000566498 HSPD1P10809 573 aaKnown RBP22.95■■□□□ 1.26
CCDC113-204ENST00000566498 ELNP15502 786 aa22.95■■□□□ 1.26
CCDC113-204ENST00000566498 UBXN2AP68543 259 aa22.95■■□□□ 1.26
CCDC113-204ENST00000566498 IRF5Q13568 498 aa22.95■■□□□ 1.26
CCDC113-204ENST00000566498 WDR78Q5VTH9 848 aa22.95■■□□□ 1.26
CCDC113-204ENST00000566498 CCDC171Q6TFL3 1326 aa22.95■■□□□ 1.26
CCDC113-204ENST00000566498 ZNF589Q86UQ0 364 aaPredicted RBP22.95■■□□□ 1.26
CCDC113-204ENST00000566498 INCENPQ9NQS7 918 aa22.95■■□□□ 1.26
CCDC113-204ENST00000566498 SPDYE16A6NNV3 312 aaPredicted RBP22.94■■□□□ 1.26
CCDC113-204ENST00000566498 WDR46O15213 610 aaKnown RBP22.94■■□□□ 1.26
CCDC113-204ENST00000566498 LBX2Q6XYB7 198 aa22.94■■□□□ 1.26
CCDC113-204ENST00000566498 PORCNQ9H237 461 aa22.94■■□□□ 1.26
CCDC113-204ENST00000566498 BTBD7Q9P203 1132 aa22.94■■□□□ 1.26
CCDC113-204ENST00000566498 GJD2Q9UKL4 321 aa22.94■■□□□ 1.26
CCDC113-204ENST00000566498 CNMDO75829 334 aa22.93■■□□□ 1.26
CCDC113-204ENST00000566498 EN2P19622 333 aaPredicted RBP22.93■■□□□ 1.26
CCDC113-204ENST00000566498 MTFR1Q15390 333 aa22.93■■□□□ 1.26
CCDC113-204ENST00000566498 TTC22Q5TAA0 569 aa22.93■■□□□ 1.26
CCDC113-204ENST00000566498 NEDD1Q8NHV4 660 aa22.93■■□□□ 1.26
CCDC113-204ENST00000566498 PXYLP1Q8TE99 480 aa22.93■■□□□ 1.26
CCDC113-204ENST00000566498 CEP95Q96GE4 821 aa22.93■■□□□ 1.26
CCDC113-204ENST00000566498 NUDT12Q9BQG2 462 aa22.93■■□□□ 1.26
CCDC113-204ENST00000566498 TOMM22Q9NS69 142 aa22.93■■□□□ 1.26
CCDC113-204ENST00000566498 MTMR4Q9NYA4 1195 aa22.93■■□□□ 1.26
CCDC113-204ENST00000566498 ANAPC4Q9UJX5 808 aa22.93■■□□□ 1.26
CCDC113-204ENST00000566498 TSPY2A6NKD2 308 aa22.92■■□□□ 1.26
CCDC113-204ENST00000566498 F5H6K3 240 aa22.92■■□□□ 1.26
CCDC113-204ENST00000566498 RANBP6O60518 1105 aaKnown RBP22.92■■□□□ 1.26
CCDC113-204ENST00000566498 CYP2B6P20813 491 aa22.92■■□□□ 1.26
CCDC113-204ENST00000566498 DSG3P32926 999 aa22.92■■□□□ 1.26
CCDC113-204ENST00000566498 KLRC3Q07444 240 aa22.92■■□□□ 1.26
CCDC113-204ENST00000566498 PLEKHH3Q7Z736 793 aa22.92■■□□□ 1.26
CCDC113-204ENST00000566498 IGKV6D-41A0A0C4DH26 115 aa22.91■■□□□ 1.26
CCDC113-204ENST00000566498 TTLL1O95922 423 aa22.91■■□□□ 1.26
CCDC113-204ENST00000566498 CCL5P13501 91 aa22.91■■□□□ 1.26
CCDC113-204ENST00000566498 PLS1Q14651 629 aa22.91■■□□□ 1.26
CCDC113-204ENST00000566498 FAM83BQ5T0W9 1011 aa22.91■■□□□ 1.26
CCDC113-204ENST00000566498 GPR142Q7Z601 462 aa22.91■■□□□ 1.26
CCDC113-204ENST00000566498 RNF208Q9H0X6 261 aa22.91■■□□□ 1.26
CCDC113-204ENST00000566498 INHAP05111 366 aa22.9■■□□□ 1.26
CCDC113-204ENST00000566498 HAND2P61296 217 aa22.9■■□□□ 1.26
CCDC113-204ENST00000566498 RRP12Q5JTH9 1297 aaKnown RBP22.9■■□□□ 1.26
CCDC113-204ENST00000566498 MB21D1Q8N884 522 aa22.9■■□□□ 1.26
CCDC113-204ENST00000566498 MKL1Q969V6 931 aa22.9■■□□□ 1.26
CCDC113-204ENST00000566498 ATG4CQ96DT6 458 aa22.9■■□□□ 1.26
CCDC113-204ENST00000566498 NUP88Q99567 741 aaPredicted RBP22.9■■□□□ 1.26
CCDC113-204ENST00000566498 IVNS1ABPQ9Y6Y0 642 aa22.9■■□□□ 1.26
CCDC113-204ENST00000566498 SOCS4Q8WXH5 440 aa22.89■■□□□ 1.25
CCDC113-204ENST00000566498 FBXO28Q9NVF7 368 aa22.89■■□□□ 1.25
CCDC113-204ENST00000566498 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.89■■□□□ 1.25
CCDC113-204ENST00000566498 NDUFB10O96000 172 aa22.88■■□□□ 1.25
CCDC113-204ENST00000566498 GSPT1P15170 499 aaKnown RBP22.88■■□□□ 1.25
CCDC113-204ENST00000566498 LRRC47Q8N1G4 583 aaKnown RBP22.88■■□□□ 1.25
CCDC113-204ENST00000566498 SPATC1LQ9H0A9 340 aa22.88■■□□□ 1.25
CCDC113-204ENST00000566498 KIAA0100Q14667 2235 aaKnown RBP22.88■■□□□ 1.25
CCDC113-204ENST00000566498 GREB1LQ9C091 1923 aaPredicted RBP22.87■■□□□ 1.25
CCDC113-204ENST00000566498 ZNF213O14771 459 aa22.87■■□□□ 1.25
CCDC113-204ENST00000566498 RGS2P41220 211 aa22.87■■□□□ 1.25
CCDC113-204ENST00000566498 PPP4R3BQ5MIZ7 849 aa22.87■■□□□ 1.25
CCDC113-204ENST00000566498 MORN1Q5T089 497 aa22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms