RNA–Protein interactions for RNA: ENST00000566279.5

TCF4-231, Transcript of transcription factor 4, human

TSL 5 BASIC

Gene TCF4, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-231	ENST00000566279	USP17L12	C9JPN9	530 aa		11.75	□□□□□ -0.53
TCF4-231	ENST00000566279	USP17L21	D6R901	530 aa		11.75	□□□□□ -0.53
TCF4-231	ENST00000566279	RCAN1	P53805	252 aa		11.75	□□□□□ -0.53
TCF4-231	ENST00000566279	CST9	Q5W186	159 aa		11.75	□□□□□ -0.53
TCF4-231	ENST00000566279	SYNE3	Q6ZMZ3	975 aa		11.75	□□□□□ -0.53
TCF4-231	ENST00000566279	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.75	□□□□□ -0.53
TCF4-231	ENST00000566279	TMTC2	Q8N394	836 aa		11.75	□□□□□ -0.53
TCF4-231	ENST00000566279	BICD2	Q8TD16	824 aa		11.75	□□□□□ -0.53
TCF4-231	ENST00000566279	IDI2	Q9BXS1	227 aa		11.75	□□□□□ -0.53
TCF4-231	ENST00000566279	NUP62CL	Q9H1M0	184 aa		11.75	□□□□□ -0.53
TCF4-231	ENST00000566279	DACT1	Q9NYF0	836 aa		11.75	□□□□□ -0.53
TCF4-231	ENST00000566279	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
TCF4-231	ENST00000566279	CELF2	O95319	508 aa	Known RBP	11.75	□□□□□ -0.53
TCF4-231	ENST00000566279	FMNL1	O95466	1100 aa	Predicted RBP	11.75	□□□□□ -0.53
TCF4-231	ENST00000566279	RTN1	Q16799	776 aa		11.75	□□□□□ -0.53
TCF4-231	ENST00000566279	MIGA2	Q7L4E1	593 aa		11.75	□□□□□ -0.53
TCF4-231	ENST00000566279	BRAP	Q7Z569	592 aa		11.75	□□□□□ -0.53
TCF4-231	ENST00000566279	ZNF654	Q8IZM8	581 aa		11.75	□□□□□ -0.53
TCF4-231	ENST00000566279	OSBPL5	Q9H0X9	879 aa	Predicted RBP	11.75	□□□□□ -0.53
TCF4-231	ENST00000566279	DDX19A	Q9NUU7	478 aa	Known RBP	11.75	□□□□□ -0.53
TCF4-231	ENST00000566279	RTEL1	Q9NZ71	1219 aa		11.75	□□□□□ -0.53
TCF4-231	ENST00000566279	MYH6	P13533	1939 aa		11.74	□□□□□ -0.53
TCF4-231	ENST00000566279	UBE2Q2L	H0YL09	131 aa		11.74	□□□□□ -0.53
TCF4-231	ENST00000566279	ORC4	O43929	436 aa		11.74	□□□□□ -0.53
TCF4-231	ENST00000566279	NR1I2	O75469	434 aa		11.74	□□□□□ -0.53
TCF4-231	ENST00000566279	PRDM1	O75626	825 aa		11.74	□□□□□ -0.53
TCF4-231	ENST00000566279	CYP2D6	P10635	497 aa		11.74	□□□□□ -0.53
TCF4-231	ENST00000566279	IFNAR1	P17181	557 aa		11.74	□□□□□ -0.53
TCF4-231	ENST00000566279	TNFAIP1	Q13829	316 aa		11.74	□□□□□ -0.53
TCF4-231	ENST00000566279	SBK1	Q52WX2	424 aa		11.74	□□□□□ -0.53
TCF4-231	ENST00000566279	KRT40	Q6A162	431 aa		11.74	□□□□□ -0.53
TCF4-231	ENST00000566279	FAM43A	Q8N2R8	423 aa		11.74	□□□□□ -0.53
TCF4-231	ENST00000566279	ENAH	Q8N8S7	591 aa	Predicted RBP	11.74	□□□□□ -0.53
TCF4-231	ENST00000566279	PDLIM2	Q96JY6	352 aa		11.74	□□□□□ -0.53
TCF4-231	ENST00000566279	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	11.74	□□□□□ -0.53
TCF4-231	ENST00000566279	SLC26A6	Q9BXS9	759 aa		11.74	□□□□□ -0.53
TCF4-231	ENST00000566279	CLSTN2	Q9H4D0	955 aa		11.74	□□□□□ -0.53
TCF4-231	ENST00000566279	ARPP21	Q9UBL0	812 aa	Predicted RBP	11.74	□□□□□ -0.53
TCF4-231	ENST00000566279	OTOF	Q9HC10	1997 aa		11.74	□□□□□ -0.53
TCF4-231	ENST00000566279	POLR3D	P05423	398 aa	Predicted RBP	11.74	□□□□□ -0.53
TCF4-231	ENST00000566279	TNNI2	P48788	182 aa		11.74	□□□□□ -0.53
TCF4-231	ENST00000566279	C1QTNF8	P60827	252 aa		11.74	□□□□□ -0.53
TCF4-231	ENST00000566279	SSRP1	Q08945	709 aa	Known RBP	11.74	□□□□□ -0.53
TCF4-231	ENST00000566279	FSTL1	Q12841	308 aa		11.74	□□□□□ -0.53
TCF4-231	ENST00000566279	MAP3K11	Q16584	847 aa		11.74	□□□□□ -0.53
TCF4-231	ENST00000566279	MYSM1	Q5VVJ2	828 aa		11.74	□□□□□ -0.53
TCF4-231	ENST00000566279	RBM43	Q6ZSC3	357 aa	Known RBP	11.74	□□□□□ -0.53
TCF4-231	ENST00000566279	FAM151A	Q8WW52	585 aa		11.74	□□□□□ -0.53
TCF4-231	ENST00000566279	RTN4	Q9NQC3	1192 aa	Known RBP	11.74	□□□□□ -0.53
TCF4-231	ENST00000566279	PLCG2	P16885	1265 aa		11.73	□□□□□ -0.53
TCF4-231	ENST00000566279	CAMK4	Q16566	473 aa		11.73	□□□□□ -0.53
TCF4-231	ENST00000566279	NBPF11	Q86T75	865 aa		11.73	□□□□□ -0.53
TCF4-231	ENST00000566279	FAM83A	Q86UY5	434 aa		11.73	□□□□□ -0.53
TCF4-231	ENST00000566279	FANCB	Q8NB91	859 aa		11.73	□□□□□ -0.53
TCF4-231	ENST00000566279	CSRNP1	Q96S65	589 aa		11.73	□□□□□ -0.53
TCF4-231	ENST00000566279	POLR3E	Q9NVU0	708 aa		11.73	□□□□□ -0.53
TCF4-231	ENST00000566279	MKRN1	Q9UHC7	482 aa	Known RBP	11.73	□□□□□ -0.53
TCF4-231	ENST00000566279	CLIC4	Q9Y696	253 aa		11.73	□□□□□ -0.53
TCF4-231	ENST00000566279	ENTPD3	O75355	529 aa		11.72	□□□□□ -0.53
TCF4-231	ENST00000566279	GUCY1A2	P33402	732 aa		11.72	□□□□□ -0.53
TCF4-231	ENST00000566279	LINC00301	Q8NCQ3	95 aa		11.72	□□□□□ -0.53
TCF4-231	ENST00000566279	NUP133	Q8WUM0	1156 aa		11.72	□□□□□ -0.53
TCF4-231	ENST00000566279	TNMD	Q9H2S6	317 aa		11.72	□□□□□ -0.53
TCF4-231	ENST00000566279	GOLPH3L	Q9H4A5	285 aa		11.72	□□□□□ -0.53
TCF4-231	ENST00000566279	MCM9	Q9NXL9	1143 aa		11.72	□□□□□ -0.53
TCF4-231	ENST00000566279	CEP350	Q5VT06	3117 aa		11.72	□□□□□ -0.53
TCF4-231	ENST00000566279	CCDC196	A0A1B0GTZ2	297 aa		11.72	□□□□□ -0.53
TCF4-231	ENST00000566279	YEATS4	O95619	227 aa		11.72	□□□□□ -0.53
TCF4-231	ENST00000566279	ME1	P48163	572 aa		11.72	□□□□□ -0.53
TCF4-231	ENST00000566279	PLCD1	P51178	756 aa		11.72	□□□□□ -0.53
TCF4-231	ENST00000566279	TTLL12	Q14166	644 aa	Predicted RBP	11.72	□□□□□ -0.53
TCF4-231	ENST00000566279	UVSSA	Q2YD98	709 aa		11.72	□□□□□ -0.53
TCF4-231	ENST00000566279	FKBP1C	Q5VVH2	108 aa		11.72	□□□□□ -0.53
TCF4-231	ENST00000566279	CCAR1	Q8IX12	1150 aa	Known RBP	11.72	□□□□□ -0.53
TCF4-231	ENST00000566279	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	11.72	□□□□□ -0.53
TCF4-231	ENST00000566279	WASF1	Q92558	559 aa		11.72	□□□□□ -0.53
TCF4-231	ENST00000566279	RRAGD	Q9NQL2	400 aa	Predicted RBP	11.72	□□□□□ -0.53
TCF4-231	ENST00000566279	PCDHA7	Q9UN72	937 aa		11.72	□□□□□ -0.53
TCF4-231	ENST00000566279	SLC3A2	P08195	630 aa	Known RBP	11.71	□□□□□ -0.53
TCF4-231	ENST00000566279	CCDC192	P0DO97	292 aa		11.71	□□□□□ -0.53
TCF4-231	ENST00000566279	SHROOM1	Q2M3G4	852 aa	Predicted RBP	11.71	□□□□□ -0.53
TCF4-231	ENST00000566279	IFIT1B	Q5T764	474 aa	Known RBP	11.71	□□□□□ -0.53
TCF4-231	ENST00000566279	IQCA1	Q86XH1	822 aa		11.71	□□□□□ -0.53
TCF4-231	ENST00000566279	TRIM22	Q8IYM9	498 aa		11.71	□□□□□ -0.53
TCF4-231	ENST00000566279	TRIM44	Q96DX7	344 aa	Predicted RBP	11.71	□□□□□ -0.53
TCF4-231	ENST00000566279	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	11.71	□□□□□ -0.53
TCF4-231	ENST00000566279	PPP2R3B	Q9Y5P8	575 aa		11.71	□□□□□ -0.53
TCF4-231	ENST00000566279	ATRNL1	Q5VV63	1379 aa		11.71	□□□□□ -0.53
TCF4-231	ENST00000566279	PCNT	O95613	3336 aa		11.71	□□□□□ -0.53
TCF4-231	ENST00000566279	PAPPA2	Q9BXP8	1791 aa		11.71	□□□□□ -0.53
TCF4-231	ENST00000566279	U2AF2	P26368	475 aa	Known RBP eCLIP	11.71	□□□□□ -0.54
TCF4-231	ENST00000566279	SNW1	Q13573	536 aa	Known RBP	11.71	□□□□□ -0.54
TCF4-231	ENST00000566279	TRIM29	Q14134	588 aa		11.71	□□□□□ -0.54
TCF4-231	ENST00000566279	STK38	Q15208	465 aa		11.71	□□□□□ -0.54
TCF4-231	ENST00000566279	C12orf60	Q5U649	245 aa		11.71	□□□□□ -0.54
TCF4-231	ENST00000566279	ANO1	Q5XXA6	986 aa		11.71	□□□□□ -0.54
TCF4-231	ENST00000566279	CKAP2L	Q8IYA6	745 aa		11.71	□□□□□ -0.54
TCF4-231	ENST00000566279	CMTR1	Q8N1G2	835 aa	Known RBP	11.71	□□□□□ -0.54
TCF4-231	ENST00000566279	ENGASE	Q8NFI3	743 aa		11.71	□□□□□ -0.54
TCF4-231	ENST00000566279	KCNG4	Q8TDN1	519 aa		11.71	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms