RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 A0A0G2JMZ2 1700 aa16.28■□□□□ 0.2
COMMD4-214ENST00000566230 PRUNE2Q8WUY3 3088 aa16.27■□□□□ 0.2
COMMD4-214ENST00000566230 COBLO75128 1261 aa16.27■□□□□ 0.2
COMMD4-214ENST00000566230 ADORA2AP29274 412 aa16.27■□□□□ 0.2
COMMD4-214ENST00000566230 GABPAQ06546 454 aa16.27■□□□□ 0.2
COMMD4-214ENST00000566230 SHHQ15465 462 aa16.27■□□□□ 0.2
COMMD4-214ENST00000566230 KIAA1755Q5JYT7 1200 aa16.27■□□□□ 0.2
COMMD4-214ENST00000566230 C9orf50Q5SZB4 431 aa16.27■□□□□ 0.2
COMMD4-214ENST00000566230 ANO1Q5XXA6 986 aa16.27■□□□□ 0.2
COMMD4-214ENST00000566230 OLFML2BQ68BL8 750 aa16.27■□□□□ 0.2
COMMD4-214ENST00000566230 SLC39A5Q6ZMH5 540 aa16.27■□□□□ 0.2
COMMD4-214ENST00000566230 DPP9Q86TI2 863 aa16.27■□□□□ 0.2
COMMD4-214ENST00000566230 ATP11BQ9Y2G3 1177 aa16.27■□□□□ 0.2
COMMD4-214ENST00000566230 TTC28Q96AY4 2481 aa16.27■□□□□ 0.19
COMMD4-214ENST00000566230 PARP14Q460N5 1801 aa16.26■□□□□ 0.19
COMMD4-214ENST00000566230 STRNO43815 780 aa16.26■□□□□ 0.19
COMMD4-214ENST00000566230 MAP3K12Q12852 859 aa16.26■□□□□ 0.19
COMMD4-214ENST00000566230 COG2Q14746 738 aa16.26■□□□□ 0.19
COMMD4-214ENST00000566230 ARRDC4Q8NCT1 418 aa16.26■□□□□ 0.19
COMMD4-214ENST00000566230 HOXC10Q9NYD6 342 aa16.26■□□□□ 0.19
COMMD4-214ENST00000566230 PRKAG2Q9UGJ0 569 aa16.26■□□□□ 0.19
COMMD4-214ENST00000566230 MYH8P13535 1937 aa16.25■□□□□ 0.19
COMMD4-214ENST00000566230 VCANP13611 3396 aa16.25■□□□□ 0.19
COMMD4-214ENST00000566230 ERCC3P19447 782 aa16.25■□□□□ 0.19
COMMD4-214ENST00000566230 PRAMEF19Q5SWL8 479 aa16.25■□□□□ 0.19
COMMD4-214ENST00000566230 ZNF697Q5TEC3 545 aa16.25■□□□□ 0.19
COMMD4-214ENST00000566230 TMED8Q6PL24 325 aaPredicted RBP16.25■□□□□ 0.19
COMMD4-214ENST00000566230 FTSJ3Q8IY81 847 aaKnown RBP16.25■□□□□ 0.19
COMMD4-214ENST00000566230 SHCBP1Q8NEM2 672 aa16.25■□□□□ 0.19
COMMD4-214ENST00000566230 CDX2Q99626 313 aaPredicted RBP16.25■□□□□ 0.19
COMMD4-214ENST00000566230 SPATC1LQ9H0A9 340 aa16.25■□□□□ 0.19
COMMD4-214ENST00000566230 COL11A1P12107 1806 aaPredicted RBP16.24■□□□□ 0.19
COMMD4-214ENST00000566230 SEPT4O43236 478 aa16.24■□□□□ 0.19
COMMD4-214ENST00000566230 POLR3DP05423 398 aaPredicted RBP16.24■□□□□ 0.19
COMMD4-214ENST00000566230 SNX17Q15036 470 aa16.24■□□□□ 0.19
COMMD4-214ENST00000566230 TRIM60Q495X7 471 aa16.24■□□□□ 0.19
COMMD4-214ENST00000566230 SH3RF1Q7Z6J0 888 aa16.24■□□□□ 0.19
COMMD4-214ENST00000566230 BADQ92934 168 aa16.24■□□□□ 0.19
COMMD4-214ENST00000566230 YTHDC1Q96MU7 727 aaKnown RBP16.24■□□□□ 0.19
COMMD4-214ENST00000566230 SEMA6BQ9H3T3 888 aa16.24■□□□□ 0.19
COMMD4-214ENST00000566230 MAGEB6P1A0A0J9YX57 407 aa16.23■□□□□ 0.19
COMMD4-214ENST00000566230 TRIM43BA6NCK2 446 aa16.23■□□□□ 0.19
COMMD4-214ENST00000566230 KBTBD13C9JR72 458 aa16.23■□□□□ 0.19
COMMD4-214ENST00000566230 RLBP1P12271 317 aa16.23■□□□□ 0.19
COMMD4-214ENST00000566230 ADCYAP1R1P41586 468 aa16.23■□□□□ 0.19
COMMD4-214ENST00000566230 LRRC41Q15345 812 aa16.23■□□□□ 0.19
COMMD4-214ENST00000566230 SIAH1Q8IUQ4 282 aa16.23■□□□□ 0.19
COMMD4-214ENST00000566230 FERMT2Q96AC1 680 aa16.23■□□□□ 0.19
COMMD4-214ENST00000566230 TRIM43Q96BQ3 446 aaPredicted RBP16.23■□□□□ 0.19
COMMD4-214ENST00000566230 TANGO6Q9C0B7 1094 aa16.23■□□□□ 0.19
COMMD4-214ENST00000566230 PDLIM7Q9NR12 457 aa16.23■□□□□ 0.19
COMMD4-214ENST00000566230 SPTBN5Q9NRC6 3674 aaKnown RBP16.23■□□□□ 0.19
COMMD4-214ENST00000566230 PLXNA1Q9UIW2 1896 aa16.22■□□□□ 0.19
COMMD4-214ENST00000566230 BAZ2AQ9UIF9 1905 aaKnown RBP16.22■□□□□ 0.19
COMMD4-214ENST00000566230 MPHOSPH10O00566 681 aaKnown RBP16.22■□□□□ 0.19
COMMD4-214ENST00000566230 MYCNP04198 464 aaPredicted RBP16.22■□□□□ 0.19
COMMD4-214ENST00000566230 CYP2D6P10635 497 aa16.22■□□□□ 0.19
COMMD4-214ENST00000566230 DSG3P32926 999 aa16.22■□□□□ 0.19
COMMD4-214ENST00000566230 AACSQ86V21 672 aa16.22■□□□□ 0.19
COMMD4-214ENST00000566230 SLC44A5Q8NCS7 719 aa16.22■□□□□ 0.19
COMMD4-214ENST00000566230 TTYH1Q9H313 450 aaPredicted RBP16.22■□□□□ 0.19
COMMD4-214ENST00000566230 PRDM5Q9NQX1 630 aaPredicted RBP16.22■□□□□ 0.19
COMMD4-214ENST00000566230 MCM9Q9NXL9 1143 aa16.22■□□□□ 0.19
COMMD4-214ENST00000566230 PDE6AP16499 860 aa16.21■□□□□ 0.19
COMMD4-214ENST00000566230 FAM47AQ5JRC9 791 aa16.21■□□□□ 0.19
COMMD4-214ENST00000566230 SLC9C2Q5TAH2 1124 aa16.21■□□□□ 0.19
COMMD4-214ENST00000566230 C1orf53Q5VUE5 145 aa16.21■□□□□ 0.19
COMMD4-214ENST00000566230 CEP85Q6P2H3 762 aa16.21■□□□□ 0.19
COMMD4-214ENST00000566230 CLEC10AQ8IUN9 316 aa16.21■□□□□ 0.19
COMMD4-214ENST00000566230 ABRAQ8N0Z2 381 aa16.21■□□□□ 0.19
COMMD4-214ENST00000566230 MB21D1Q8N884 522 aa16.21■□□□□ 0.19
COMMD4-214ENST00000566230 ATG4CQ96DT6 458 aa16.21■□□□□ 0.19
COMMD4-214ENST00000566230 MAML3Q96JK9 1138 aa16.21■□□□□ 0.19
COMMD4-214ENST00000566230 CRNKL1Q9BZJ0 848 aaKnown RBP16.21■□□□□ 0.19
COMMD4-214ENST00000566230 MROH8Q9H579 483 aa16.21■□□□□ 0.19
COMMD4-214ENST00000566230 DCP1AQ9NPI6 582 aaPredicted RBP16.21■□□□□ 0.19
COMMD4-214ENST00000566230 EXOC6BQ9Y2D4 811 aa16.21■□□□□ 0.19
COMMD4-214ENST00000566230 TCRBV5S4A2TA0A5A2 114 aa16.2■□□□□ 0.18
COMMD4-214ENST00000566230 ITGB8P26012 769 aa16.2■□□□□ 0.18
COMMD4-214ENST00000566230 SMAD3P84022 425 aaKnown RBP16.2■□□□□ 0.18
COMMD4-214ENST00000566230 TLE2Q04725 743 aa16.2■□□□□ 0.18
COMMD4-214ENST00000566230 PLS1Q14651 629 aa16.2■□□□□ 0.18
COMMD4-214ENST00000566230 TMEM179Q6ZVK1 233 aa16.2■□□□□ 0.18
COMMD4-214ENST00000566230 NCAPG2Q86XI2 1143 aa16.2■□□□□ 0.18
COMMD4-214ENST00000566230 ITPRIPQ8IWB1 547 aa16.2■□□□□ 0.18
COMMD4-214ENST00000566230 LCORLQ8N3X6 602 aa16.2■□□□□ 0.18
COMMD4-214ENST00000566230 MAFAQ8NHW3 353 aaPredicted RBP16.2■□□□□ 0.18
COMMD4-214ENST00000566230 SDR42E1Q8WUS8 393 aa16.2■□□□□ 0.18
COMMD4-214ENST00000566230 MYLIPQ8WY64 445 aa16.2■□□□□ 0.18
COMMD4-214ENST00000566230 DYNLL2Q96FJ2 89 aa16.2■□□□□ 0.18
COMMD4-214ENST00000566230 CHMP4BQ9H444 224 aaKnown RBP16.2■□□□□ 0.18
COMMD4-214ENST00000566230 SLC5A4Q9NY91 659 aa16.2■□□□□ 0.18
COMMD4-214ENST00000566230 CDH23Q9H251 3354 aa16.2■□□□□ 0.18
COMMD4-214ENST00000566230 ZNF532Q9HCE3 1301 aa16.19■□□□□ 0.18
COMMD4-214ENST00000566230 SMIM22K7EJ46 135 aa16.19■□□□□ 0.18
COMMD4-214ENST00000566230 FLOT1O75955 427 aa16.19■□□□□ 0.18
COMMD4-214ENST00000566230 EPHB4P54760 987 aa16.19■□□□□ 0.18
COMMD4-214ENST00000566230 SPICE1Q8N0Z3 855 aa16.19■□□□□ 0.18
COMMD4-214ENST00000566230 IL1RAPL2Q9NP60 686 aa16.19■□□□□ 0.18
COMMD4-214ENST00000566230 PHF24Q9UPV7 400 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms