RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 MICU3Q86XE3 530 aa10.9□□□□□ -0.66
CNEP1R1-206ENST00000565556 KAT14Q9H8E8 782 aa10.9□□□□□ -0.66
CNEP1R1-206ENST00000565556 NCOA5Q9HCD5 579 aaKnown RBP10.9□□□□□ -0.66
CNEP1R1-206ENST00000565556 IL17RBQ9NRM6 502 aa10.9□□□□□ -0.66
CNEP1R1-206ENST00000565556 GOLGB1Q14789 3259 aaKnown RBP10.9□□□□□ -0.66
CNEP1R1-206ENST00000565556 TBC1D12O60347 775 aa10.89□□□□□ -0.67
CNEP1R1-206ENST00000565556 NMT2O60551 498 aa10.89□□□□□ -0.67
CNEP1R1-206ENST00000565556 ATXN8OSP0DMR3 200 aa10.89□□□□□ -0.67
CNEP1R1-206ENST00000565556 GTF2F1P35269 517 aaKnown RBP eCLIP10.89□□□□□ -0.67
CNEP1R1-206ENST00000565556 RTN1Q16799 776 aa10.89□□□□□ -0.67
CNEP1R1-206ENST00000565556 CERKLQ49MI3 558 aaPredicted RBP10.89□□□□□ -0.67
CNEP1R1-206ENST00000565556 RCSD1Q6JBY9 416 aa10.89□□□□□ -0.67
CNEP1R1-206ENST00000565556 TATDN1Q6P1N9 297 aa10.89□□□□□ -0.67
CNEP1R1-206ENST00000565556 FANCBQ8NB91 859 aa10.89□□□□□ -0.67
CNEP1R1-206ENST00000565556 NSUN7Q8NE18 718 aaKnown RBP10.89□□□□□ -0.67
CNEP1R1-206ENST00000565556 MAP3K14Q99558 947 aa10.89□□□□□ -0.67
CNEP1R1-206ENST00000565556 SPTLC3Q9NUV7 552 aa10.89□□□□□ -0.67
CNEP1R1-206ENST00000565556 RBM28Q9NW13 759 aaKnown RBP10.89□□□□□ -0.67
CNEP1R1-206ENST00000565556 PTPDC1A2A3K4 754 aa10.89□□□□□ -0.67
CNEP1R1-206ENST00000565556 DDNO94850 711 aaPredicted RBP10.89□□□□□ -0.67
CNEP1R1-206ENST00000565556 CTDNEP1O95476 244 aa10.89□□□□□ -0.67
CNEP1R1-206ENST00000565556 SYT1P21579 422 aa10.89□□□□□ -0.67
CNEP1R1-206ENST00000565556 NOVP48745 357 aa10.89□□□□□ -0.67
CNEP1R1-206ENST00000565556 NOLC1Q14978 699 aaKnown RBP eCLIP10.89□□□□□ -0.67
CNEP1R1-206ENST00000565556 LARP1BQ659C4 914 aaKnown RBP10.89□□□□□ -0.67
CNEP1R1-206ENST00000565556 APOBEC3FQ8IUX4 373 aaKnown RBP10.89□□□□□ -0.67
CNEP1R1-206ENST00000565556 SMAP1Q8IYB5 467 aaPredicted RBP10.89□□□□□ -0.67
CNEP1R1-206ENST00000565556 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.89□□□□□ -0.67
CNEP1R1-206ENST00000565556 EGFRP00533 1210 aa10.88□□□□□ -0.67
CNEP1R1-206ENST00000565556 TOP1P11387 765 aaKnown RBP10.88□□□□□ -0.67
CNEP1R1-206ENST00000565556 AKR1B1P15121 316 aa10.88□□□□□ -0.67
CNEP1R1-206ENST00000565556 KIF5BP33176 963 aa10.88□□□□□ -0.67
CNEP1R1-206ENST00000565556 EPS15P42566 896 aa10.88□□□□□ -0.67
CNEP1R1-206ENST00000565556 TROAPQ12815 778 aa10.88□□□□□ -0.67
CNEP1R1-206ENST00000565556 RASA3Q14644 834 aa10.88□□□□□ -0.67
CNEP1R1-206ENST00000565556 PNMA1Q8ND90 353 aa10.88□□□□□ -0.67
CNEP1R1-206ENST00000565556 NUP133Q8WUM0 1156 aa10.88□□□□□ -0.67
CNEP1R1-206ENST00000565556 HOOK2Q96ED9 719 aa10.88□□□□□ -0.67
CNEP1R1-206ENST00000565556 MYL10Q9BUA6 226 aa10.88□□□□□ -0.67
CNEP1R1-206ENST00000565556 DNAJC18Q9H819 358 aa10.88□□□□□ -0.67
CNEP1R1-206ENST00000565556 ADARB2Q9NS39 739 aaKnown RBP10.88□□□□□ -0.67
CNEP1R1-206ENST00000565556 MTMR4Q9NYA4 1195 aa10.88□□□□□ -0.67
CNEP1R1-206ENST00000565556 HACL1Q9UJ83 578 aa10.88□□□□□ -0.67
CNEP1R1-206ENST00000565556 STX8Q9UNK0 236 aa10.88□□□□□ -0.67
CNEP1R1-206ENST00000565556 GREB1LQ9C091 1923 aaPredicted RBP10.88□□□□□ -0.67
CNEP1R1-206ENST00000565556 IGKV6D-41A0A0C4DH26 115 aa10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 GOLGA6L6A8MZA4 724 aa10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 MPHOSPH10O00566 681 aaKnown RBP10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 FIBPO43427 364 aa10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 JAK2O60674 1132 aa10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 TTLL1O95922 423 aa10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 IFNAR1P17181 557 aa10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 RXRAP19793 462 aa10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 ADD1P35611 737 aaKnown RBP10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 MAP3K10Q02779 954 aa10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 TMEM179Q6ZVK1 233 aa10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 RAB11FIP4Q86YS3 637 aa10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 CCDC144CPQ8IYA2 1237 aa10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 RGS22Q8NE09 1264 aa10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 CTCFLQ8NI51 663 aaPredicted RBP10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 CEP95Q96GE4 821 aa10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 L3MBTL3Q96JM7 780 aaPredicted RBP10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 TMEM47Q9BQJ4 181 aa10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 CCDC94Q9BW85 323 aaPredicted RBP10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 TMEM39BQ9GZU3 492 aa10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 KANSL2Q9H9L4 492 aa10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 CABP5Q9NP86 173 aa10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 FAM217BQ9NTX9 383 aaPredicted RBP10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 PGAP2Q9UHJ9 254 aa10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 PPP2R3BQ9Y5P8 575 aa10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 PITPNM2Q9BZ72 1349 aa10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 CDC27P30260 824 aa10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 GNAQP50148 359 aa10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 SSRP1Q08945 709 aaKnown RBP10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 NTRK3Q16288 839 aa10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 ABCB5Q2M3G0 1257 aa10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 TRIM22Q8IYM9 498 aa10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 WASF1Q92558 559 aa10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 DDX11Q96FC9 970 aa10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 FUCA2Q9BTY2 467 aa10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 ORC3Q9UBD5 711 aaPredicted RBP10.87□□□□□ -0.67
CNEP1R1-206ENST00000565556 STK36Q9NRP7 1315 aa10.86□□□□□ -0.67
CNEP1R1-206ENST00000565556 GLTPD2A6NH11 291 aa10.86□□□□□ -0.67
CNEP1R1-206ENST00000565556 ANGEL2Q5VTE6 544 aaKnown RBP10.86□□□□□ -0.67
CNEP1R1-206ENST00000565556 TRPM4Q8TD43 1214 aa10.86□□□□□ -0.67
CNEP1R1-206ENST00000565556 DEFB129Q9H1M3 183 aa10.86□□□□□ -0.67
CNEP1R1-206ENST00000565556 TTC12Q9H892 705 aaPredicted RBP10.86□□□□□ -0.67
CNEP1R1-206ENST00000565556 NYAP2Q9P242 653 aa10.86□□□□□ -0.67
CNEP1R1-206ENST00000565556 MYH4Q9Y623 1939 aa10.85□□□□□ -0.67
CNEP1R1-206ENST00000565556 FAM196BA6NMK8 535 aa10.85□□□□□ -0.67
CNEP1R1-206ENST00000565556 H3BQV1 296 aa10.85□□□□□ -0.67
CNEP1R1-206ENST00000565556 FMNL1O95466 1100 aaPredicted RBP10.85□□□□□ -0.67
CNEP1R1-206ENST00000565556 CCDC192P0DO97 292 aa10.85□□□□□ -0.67
CNEP1R1-206ENST00000565556 GRM4Q14833 912 aa10.85□□□□□ -0.67
CNEP1R1-206ENST00000565556 IFFO2Q5TF58 517 aa10.85□□□□□ -0.67
CNEP1R1-206ENST00000565556 DCAF15Q66K64 600 aa10.85□□□□□ -0.67
CNEP1R1-206ENST00000565556 MKL1Q969V6 931 aa10.85□□□□□ -0.67
CNEP1R1-206ENST00000565556 TEPSINQ96N21 525 aa10.85□□□□□ -0.67
CNEP1R1-206ENST00000565556 LZTS2Q9BRK4 669 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms