RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 RLFQ13129 1914 aa18.33■□□□□ 0.52
COMMD4-212ENST00000565517 ORC4O43929 436 aa18.32■□□□□ 0.52
COMMD4-212ENST00000565517 CAPN15O75808 1086 aa18.32■□□□□ 0.52
COMMD4-212ENST00000565517 CENPBP07199 599 aaPredicted RBP18.32■□□□□ 0.52
COMMD4-212ENST00000565517 TSPY3P0CV98 308 aa18.32■□□□□ 0.52
COMMD4-212ENST00000565517 TSPY8P0CW00 308 aa18.32■□□□□ 0.52
COMMD4-212ENST00000565517 CTDSPL2Q05D32 466 aa18.32■□□□□ 0.52
COMMD4-212ENST00000565517 RUFY2Q8WXA3 655 aa18.32■□□□□ 0.52
COMMD4-212ENST00000565517 MKL1Q969V6 931 aa18.32■□□□□ 0.52
COMMD4-212ENST00000565517 DSCC1Q9BVC3 393 aa18.32■□□□□ 0.52
COMMD4-212ENST00000565517 GOPCQ9HD26 462 aa18.32■□□□□ 0.52
COMMD4-212ENST00000565517 RBPJLQ9UBG7 517 aa18.32■□□□□ 0.52
COMMD4-212ENST00000565517 SYNPO2Q9UMS6 1093 aa18.32■□□□□ 0.52
COMMD4-212ENST00000565517 PARP14Q460N5 1801 aa18.32■□□□□ 0.52
COMMD4-212ENST00000565517 RAD50Q92878 1312 aa18.31■□□□□ 0.52
COMMD4-212ENST00000565517 LAMA4Q16363 1823 aa18.31■□□□□ 0.52
COMMD4-212ENST00000565517 WDR46O15213 610 aaKnown RBP18.31■□□□□ 0.52
COMMD4-212ENST00000565517 PCP11498 1178 aaKnown RBP18.31■□□□□ 0.52
COMMD4-212ENST00000565517 TFAP4Q01664 338 aa18.31■□□□□ 0.52
COMMD4-212ENST00000565517 ATP2B2Q01814 1243 aa18.31■□□□□ 0.52
COMMD4-212ENST00000565517 COG2Q14746 738 aa18.31■□□□□ 0.52
COMMD4-212ENST00000565517 KIAA1755Q5JYT7 1200 aa18.31■□□□□ 0.52
COMMD4-212ENST00000565517 PPP4R3BQ5MIZ7 849 aa18.31■□□□□ 0.52
COMMD4-212ENST00000565517 GPRC5AQ8NFJ5 357 aa18.31■□□□□ 0.52
COMMD4-212ENST00000565517 CCDC136Q96JN2 1154 aa18.31■□□□□ 0.52
COMMD4-212ENST00000565517 MTMR4Q9NYA4 1195 aa18.31■□□□□ 0.52
COMMD4-212ENST00000565517 HOXC10Q9NYD6 342 aa18.31■□□□□ 0.52
COMMD4-212ENST00000565517 RABGAP1Q9Y3P9 1069 aa18.31■□□□□ 0.52
COMMD4-212ENST00000565517 CHMLP26374 656 aa18.3■□□□□ 0.52
COMMD4-212ENST00000565517 CEP95Q96GE4 821 aa18.3■□□□□ 0.52
COMMD4-212ENST00000565517 TXNRD2Q9NNW7 524 aa18.3■□□□□ 0.52
COMMD4-212ENST00000565517 PTCH2Q9Y6C5 1203 aa18.3■□□□□ 0.52
COMMD4-212ENST00000565517 MYPNQ86TC9 1320 aa18.29■□□□□ 0.52
COMMD4-212ENST00000565517 TNPO2O14787 897 aaKnown RBP18.29■□□□□ 0.52
COMMD4-212ENST00000565517 TTLL1O95922 423 aa18.29■□□□□ 0.52
COMMD4-212ENST00000565517 ERVK-9P63128 1117 aa18.29■□□□□ 0.52
COMMD4-212ENST00000565517 ERVK-24P63145 666 aa18.29■□□□□ 0.52
COMMD4-212ENST00000565517 FAM47AQ5JRC9 791 aa18.29■□□□□ 0.52
COMMD4-212ENST00000565517 POTEEQ6S8J3 1075 aa18.29■□□□□ 0.52
COMMD4-212ENST00000565517 NBPF11Q86T75 865 aa18.29■□□□□ 0.52
COMMD4-212ENST00000565517 COA7Q96BR5 231 aa18.29■□□□□ 0.52
COMMD4-212ENST00000565517 ARMC5Q96C12 935 aa18.29■□□□□ 0.52
COMMD4-212ENST00000565517 CLIP2Q9UDT6 1046 aa18.29■□□□□ 0.52
COMMD4-212ENST00000565517 TACC3Q9Y6A5 838 aa18.29■□□□□ 0.52
COMMD4-212ENST00000565517 HTTP42858 3142 aa18.29■□□□□ 0.52
COMMD4-212ENST00000565517 TSPY2A6NKD2 308 aa18.28■□□□□ 0.52
COMMD4-212ENST00000565517 SPDYE16A6NNV3 312 aaPredicted RBP18.28■□□□□ 0.52
COMMD4-212ENST00000565517 ZNF213O14771 459 aa18.28■□□□□ 0.52
COMMD4-212ENST00000565517 ECM2O94769 699 aaPredicted RBP18.28■□□□□ 0.52
COMMD4-212ENST00000565517 NT5C2P49902 561 aa18.28■□□□□ 0.52
COMMD4-212ENST00000565517 Q3C1V9 767 aa18.28■□□□□ 0.52
COMMD4-212ENST00000565517 AKNAD1Q5T1N1 836 aa18.28■□□□□ 0.52
COMMD4-212ENST00000565517 ERICH6BQ5W0A0 696 aa18.28■□□□□ 0.52
COMMD4-212ENST00000565517 SPICE1Q8N0Z3 855 aa18.28■□□□□ 0.52
COMMD4-212ENST00000565517 STAG1Q8WVM7 1258 aa18.28■□□□□ 0.52
COMMD4-212ENST00000565517 TANGO6Q9C0B7 1094 aa18.28■□□□□ 0.52
COMMD4-212ENST00000565517 INCENPQ9NQS7 918 aa18.28■□□□□ 0.52
COMMD4-212ENST00000565517 CTNNA3Q9UI47 895 aa18.28■□□□□ 0.52
COMMD4-212ENST00000565517 A0A0G2JMZ2 1700 aa18.27■□□□□ 0.52
COMMD4-212ENST00000565517 F5H6K3 240 aa18.27■□□□□ 0.52
COMMD4-212ENST00000565517 RANBP6O60518 1105 aaKnown RBP18.27■□□□□ 0.52
COMMD4-212ENST00000565517 MAPK4P31152 587 aa18.27■□□□□ 0.52
COMMD4-212ENST00000565517 DSG3P32926 999 aa18.27■□□□□ 0.52
COMMD4-212ENST00000565517 PRKCZQ05513 592 aa18.27■□□□□ 0.52
COMMD4-212ENST00000565517 KLRC3Q07444 240 aa18.27■□□□□ 0.52
COMMD4-212ENST00000565517 SLC9C1Q4G0N8 1177 aa18.27■□□□□ 0.52
COMMD4-212ENST00000565517 MFSD6Q6ZSS7 791 aa18.27■□□□□ 0.52
COMMD4-212ENST00000565517 MB21D1Q8N884 522 aa18.27■□□□□ 0.52
COMMD4-212ENST00000565517 RAET1EQ8TD07 263 aa18.27■□□□□ 0.52
COMMD4-212ENST00000565517 PAGR1Q9BTK6 254 aa18.27■□□□□ 0.52
COMMD4-212ENST00000565517 RNF41Q9H4P4 317 aaPredicted RBP18.27■□□□□ 0.52
COMMD4-212ENST00000565517 PLXNB2O15031 1838 aa18.26■□□□□ 0.51
COMMD4-212ENST00000565517 CNMDO75829 334 aa18.26■□□□□ 0.51
COMMD4-212ENST00000565517 FLOT1O75955 427 aa18.26■□□□□ 0.51
COMMD4-212ENST00000565517 NOVP48745 357 aa18.26■□□□□ 0.51
COMMD4-212ENST00000565517 FLT3LGP49771 235 aa18.26■□□□□ 0.51
COMMD4-212ENST00000565517 HAND2P61296 217 aa18.26■□□□□ 0.51
COMMD4-212ENST00000565517 CCNA1P78396 465 aa18.26■□□□□ 0.51
COMMD4-212ENST00000565517 IRF5Q13568 498 aa18.26■□□□□ 0.51
COMMD4-212ENST00000565517 GMCL1P1Q8NEA9 526 aa18.26■□□□□ 0.51
COMMD4-212ENST00000565517 NBPF3Q9H094 633 aa18.26■□□□□ 0.51
COMMD4-212ENST00000565517 IL25Q9H293 177 aa18.26■□□□□ 0.51
COMMD4-212ENST00000565517 IL17RBQ9NRM6 502 aa18.26■□□□□ 0.51
COMMD4-212ENST00000565517 TCP11L1Q9NUJ3 509 aa18.26■□□□□ 0.51
COMMD4-212ENST00000565517 GABRQQ9UN88 632 aa18.26■□□□□ 0.51
COMMD4-212ENST00000565517 COL11A1P12107 1806 aaPredicted RBP18.26■□□□□ 0.51
COMMD4-212ENST00000565517 SGSM2O43147 1006 aa18.25■□□□□ 0.51
COMMD4-212ENST00000565517 PEX10O60683 326 aa18.25■□□□□ 0.51
COMMD4-212ENST00000565517 NDUFB10O96000 172 aa18.25■□□□□ 0.51
COMMD4-212ENST00000565517 IMMTQ16891 758 aaKnown RBP18.25■□□□□ 0.51
COMMD4-212ENST00000565517 BMP2KLQ5H9B9 411 aa18.25■□□□□ 0.51
COMMD4-212ENST00000565517 TOMM22Q9NS69 142 aa18.25■□□□□ 0.51
COMMD4-212ENST00000565517 BTBD7Q9P203 1132 aa18.25■□□□□ 0.51
COMMD4-212ENST00000565517 GJD2Q9UKL4 321 aa18.25■□□□□ 0.51
COMMD4-212ENST00000565517 ADAMTS5Q9UNA0 930 aa18.25■□□□□ 0.51
COMMD4-212ENST00000565517 RBBP6Q7Z6E9 1792 aaKnown RBP18.25■□□□□ 0.51
COMMD4-212ENST00000565517 GRK4P32298 578 aa18.24■□□□□ 0.51
COMMD4-212ENST00000565517 RGS19P49795 217 aa18.24■□□□□ 0.51
COMMD4-212ENST00000565517 FAM83BQ5T0W9 1011 aa18.24■□□□□ 0.51
COMMD4-212ENST00000565517 TBC1D10CQ8IV04 446 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms