RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 MAST2Q6P0Q8 1798 aa11.17□□□□□ -0.62
VPS9D1-205ENST00000565452 LTBP2Q14767 1821 aa11.16□□□□□ -0.62
VPS9D1-205ENST00000565452 MROH7Q68CQ1 1323 aa11.16□□□□□ -0.62
VPS9D1-205ENST00000565452 FANCIQ9NVI1 1328 aa11.16□□□□□ -0.62
VPS9D1-205ENST00000565452 PRR33A8MZF0 331 aa11.16□□□□□ -0.62
VPS9D1-205ENST00000565452 COBLO75128 1261 aa11.16□□□□□ -0.62
VPS9D1-205ENST00000565452 ACRP10323 421 aa11.16□□□□□ -0.62
VPS9D1-205ENST00000565452 CSF2RAP15509 400 aa11.16□□□□□ -0.62
VPS9D1-205ENST00000565452 PLCG2P16885 1265 aa11.16□□□□□ -0.62
VPS9D1-205ENST00000565452 POU3F3P20264 500 aaPredicted RBP11.16□□□□□ -0.62
VPS9D1-205ENST00000565452 IL15P40933 162 aaPredicted RBP11.16□□□□□ -0.62
VPS9D1-205ENST00000565452 COG2Q14746 738 aa11.16□□□□□ -0.62
VPS9D1-205ENST00000565452 ZYXQ15942 572 aaKnown RBP11.16□□□□□ -0.62
VPS9D1-205ENST00000565452 WDR63Q8IWG1 891 aa11.16□□□□□ -0.62
VPS9D1-205ENST00000565452 ABRAQ8N0Z2 381 aa11.16□□□□□ -0.62
VPS9D1-205ENST00000565452 SHCBP1Q8NEM2 672 aa11.16□□□□□ -0.62
VPS9D1-205ENST00000565452 VTI1AQ96AJ9 217 aa11.16□□□□□ -0.62
VPS9D1-205ENST00000565452 NSUN4Q96CB9 384 aaKnown RBP11.16□□□□□ -0.62
VPS9D1-205ENST00000565452 MOV10L1Q9BXT6 1211 aaKnown RBP11.16□□□□□ -0.62
VPS9D1-205ENST00000565452 SIL1Q9H173 461 aa11.16□□□□□ -0.62
VPS9D1-205ENST00000565452 MROH8Q9H579 483 aa11.16□□□□□ -0.62
VPS9D1-205ENST00000565452 C11orf16Q9NQ32 467 aa11.16□□□□□ -0.62
VPS9D1-205ENST00000565452 RAI14Q9P0K7 980 aa11.16□□□□□ -0.62
VPS9D1-205ENST00000565452 TBX21Q9UL17 535 aa11.16□□□□□ -0.62
VPS9D1-205ENST00000565452 ZNF521Q96K83 1311 aa11.15□□□□□ -0.62
VPS9D1-205ENST00000565452 APBB1O00213 710 aa11.15□□□□□ -0.62
VPS9D1-205ENST00000565452 ACLYP53396 1101 aa11.15□□□□□ -0.62
VPS9D1-205ENST00000565452 TIMM10P62072 90 aa11.15□□□□□ -0.62
VPS9D1-205ENST00000565452 SH3RF3Q8TEJ3 882 aaPredicted RBP11.15□□□□□ -0.62
VPS9D1-205ENST00000565452 ZNF384Q8TF68 577 aa11.15□□□□□ -0.62
VPS9D1-205ENST00000565452 HLA-CQ95604 372 aa11.15□□□□□ -0.62
VPS9D1-205ENST00000565452 MAML3Q96JK9 1138 aa11.15□□□□□ -0.62
VPS9D1-205ENST00000565452 UIMC1Q96RL1 719 aa11.15□□□□□ -0.62
VPS9D1-205ENST00000565452 KIAA1683Q9H0B3 1180 aa11.15□□□□□ -0.62
VPS9D1-205ENST00000565452 USP44Q9H0E7 712 aa11.15□□□□□ -0.62
VPS9D1-205ENST00000565452 KCNH6Q9H252 994 aa11.15□□□□□ -0.62
VPS9D1-205ENST00000565452 IL23AQ9NPF7 189 aa11.15□□□□□ -0.62
VPS9D1-205ENST00000565452 LOC285556D6RIA3 1793 aa11.14□□□□□ -0.63
VPS9D1-205ENST00000565452 MOXD2PA6NHM9 499 aa11.14□□□□□ -0.63
VPS9D1-205ENST00000565452 GH2P01242 217 aa11.14□□□□□ -0.63
VPS9D1-205ENST00000565452 HLA-DOAP06340 250 aa11.14□□□□□ -0.63
VPS9D1-205ENST00000565452 FCER1AP12319 257 aa11.14□□□□□ -0.63
VPS9D1-205ENST00000565452 ERCC3P19447 782 aa11.14□□□□□ -0.63
VPS9D1-205ENST00000565452 ADORA1P30542 326 aa11.14□□□□□ -0.63
VPS9D1-205ENST00000565452 MVPQ14764 893 aaKnown RBP11.14□□□□□ -0.63
VPS9D1-205ENST00000565452 PPP2R2DQ66LE6 453 aa11.14□□□□□ -0.63
VPS9D1-205ENST00000565452 TGFBRAP1Q8WUH2 860 aa11.14□□□□□ -0.63
VPS9D1-205ENST00000565452 GLT1D1Q96MS3 346 aa11.14□□□□□ -0.63
VPS9D1-205ENST00000565452 SPATC1LQ9H0A9 340 aa11.14□□□□□ -0.63
VPS9D1-205ENST00000565452 RPAP3Q9H6T3 665 aaPredicted RBP11.14□□□□□ -0.63
VPS9D1-205ENST00000565452 PALD1Q9ULE6 856 aa11.14□□□□□ -0.63
VPS9D1-205ENST00000565452 YBX2Q9Y2T7 364 aaKnown RBP11.14□□□□□ -0.63
VPS9D1-205ENST00000565452 PCDHA11Q9Y5I1 949 aa11.14□□□□□ -0.63
VPS9D1-205ENST00000565452 MTCH2Q9Y6C9 303 aa11.14□□□□□ -0.63
VPS9D1-205ENST00000565452 DOCK2Q92608 1830 aa11.14□□□□□ -0.63
VPS9D1-205ENST00000565452 RLFQ13129 1914 aa11.13□□□□□ -0.63
VPS9D1-205ENST00000565452 ELP1O95163 1332 aa11.13□□□□□ -0.63
VPS9D1-205ENST00000565452 SPDYE16A6NNV3 312 aaPredicted RBP11.13□□□□□ -0.63
VPS9D1-205ENST00000565452 CCER2I3L3R5 266 aa11.13□□□□□ -0.63
VPS9D1-205ENST00000565452 TLR3O15455 904 aaKnown RBP11.13□□□□□ -0.63
VPS9D1-205ENST00000565452 AKR1A1P14550 325 aa11.13□□□□□ -0.63
VPS9D1-205ENST00000565452 VCAM1P19320 739 aa11.13□□□□□ -0.63
VPS9D1-205ENST00000565452 CDK7P50613 346 aa11.13□□□□□ -0.63
VPS9D1-205ENST00000565452 NHLH1Q02575 133 aa11.13□□□□□ -0.63
VPS9D1-205ENST00000565452 RAB3GAP1Q15042 981 aa11.13□□□□□ -0.63
VPS9D1-205ENST00000565452 KCNA10Q16322 511 aa11.13□□□□□ -0.63
VPS9D1-205ENST00000565452 CSPP1Q1MSJ5 1256 aa11.13□□□□□ -0.63
VPS9D1-205ENST00000565452 SHROOM1Q2M3G4 852 aaPredicted RBP11.13□□□□□ -0.63
VPS9D1-205ENST00000565452 NCAPG2Q86XI2 1143 aa11.13□□□□□ -0.63
VPS9D1-205ENST00000565452 MAPKAPK5Q8IW41 473 aa11.13□□□□□ -0.63
VPS9D1-205ENST00000565452 MB21D1Q8N884 522 aa11.13□□□□□ -0.63
VPS9D1-205ENST00000565452 KHSRPQ92945 711 aaKnown RBP eCLIP11.13□□□□□ -0.63
VPS9D1-205ENST00000565452 DNAJC18Q9H819 358 aa11.13□□□□□ -0.63
VPS9D1-205ENST00000565452 LRP2BPQ9P2M1 347 aa11.13□□□□□ -0.63
VPS9D1-205ENST00000565452 AKAP2Q9Y2D5 859 aa11.13□□□□□ -0.63
VPS9D1-205ENST00000565452 SLC4A7Q9Y6M7 1214 aa11.13□□□□□ -0.63
VPS9D1-205ENST00000565452 TCF20Q9UGU0 1960 aaKnown RBP11.12□□□□□ -0.63
VPS9D1-205ENST00000565452 ALADP13716 330 aa11.12□□□□□ -0.63
VPS9D1-205ENST00000565452 PPP4CP60510 307 aa11.12□□□□□ -0.63
VPS9D1-205ENST00000565452 PLS1Q14651 629 aa11.12□□□□□ -0.63
VPS9D1-205ENST00000565452 GORABQ5T7V8 394 aa11.12□□□□□ -0.63
VPS9D1-205ENST00000565452 TBC1D9Q6ZT07 1266 aa11.12□□□□□ -0.63
VPS9D1-205ENST00000565452 OTOP2Q7RTS6 562 aa11.12□□□□□ -0.63
VPS9D1-205ENST00000565452 RPUSD2Q8IZ73 545 aaKnown RBP11.12□□□□□ -0.63
VPS9D1-205ENST00000565452 SPATA5Q8NB90 893 aa11.12□□□□□ -0.63
VPS9D1-205ENST00000565452 XAGE2Q96GT9 111 aa11.12□□□□□ -0.63
VPS9D1-205ENST00000565452 TINF2Q9BSI4 451 aa11.12□□□□□ -0.63
VPS9D1-205ENST00000565452 CABP5Q9NP86 173 aa11.12□□□□□ -0.63
VPS9D1-205ENST00000565452 CNPY2Q9Y2B0 182 aa11.12□□□□□ -0.63
VPS9D1-205ENST00000565452 CHD9Q3L8U1 2897 aa11.11□□□□□ -0.63
VPS9D1-205ENST00000565452 ADAMTS4O75173 837 aa11.11□□□□□ -0.63
VPS9D1-205ENST00000565452 CYP2C18P33260 490 aa11.11□□□□□ -0.63
VPS9D1-205ENST00000565452 RABGGTBP53611 331 aa11.11□□□□□ -0.63
VPS9D1-205ENST00000565452 CERKLQ49MI3 558 aaPredicted RBP11.11□□□□□ -0.63
VPS9D1-205ENST00000565452 TATDN1Q6P1N9 297 aa11.11□□□□□ -0.63
VPS9D1-205ENST00000565452 PCSK9Q8NBP7 692 aaKnown RBP11.11□□□□□ -0.63
VPS9D1-205ENST00000565452 KLHDC9Q8NEP7 349 aa11.11□□□□□ -0.63
VPS9D1-205ENST00000565452 PPP1R12CQ9BZL4 782 aa11.11□□□□□ -0.63
VPS9D1-205ENST00000565452 SPC25Q9HBM1 224 aa11.11□□□□□ -0.63
VPS9D1-205ENST00000565452 AATFQ9NY61 560 aaKnown RBP eCLIP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 353 ms