RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 TMX2Q9Y320 296 aa7.69□□□□□ -1.18
TCF4-228ENST00000565393 PCDHB15Q9Y5E8 787 aa7.69□□□□□ -1.18
TCF4-228ENST00000565393 MYH13Q9UKX3 1938 aa7.68□□□□□ -1.18
TCF4-228ENST00000565393 SPDYE16A6NNV3 312 aaPredicted RBP7.68□□□□□ -1.18
TCF4-228ENST00000565393 GSG1L2A8MUP6 293 aa7.68□□□□□ -1.18
TCF4-228ENST00000565393 PATL2C9JE40 543 aaKnown RBP7.68□□□□□ -1.18
TCF4-228ENST00000565393 STRNO43815 780 aa7.68□□□□□ -1.18
TCF4-228ENST00000565393 MYCNP04198 464 aaPredicted RBP7.68□□□□□ -1.18
TCF4-228ENST00000565393 ZFYP08048 801 aaPredicted RBP7.68□□□□□ -1.18
TCF4-228ENST00000565393 ERCC3P19447 782 aa7.68□□□□□ -1.18
TCF4-228ENST00000565393 CCND3P30281 292 aaPredicted RBP7.68□□□□□ -1.18
TCF4-228ENST00000565393 DSG3P32926 999 aa7.68□□□□□ -1.18
TCF4-228ENST00000565393 SLC4A3P48751 1232 aa7.68□□□□□ -1.18
TCF4-228ENST00000565393 TDO2P48775 406 aa7.68□□□□□ -1.18
TCF4-228ENST00000565393 KIAA1755Q5JYT7 1200 aa7.68□□□□□ -1.18
TCF4-228ENST00000565393 LBX2Q6XYB7 198 aa7.68□□□□□ -1.18
TCF4-228ENST00000565393 C16orf86Q6ZW13 317 aa7.68□□□□□ -1.18
TCF4-228ENST00000565393 CLEC10AQ8IUN9 316 aa7.68□□□□□ -1.18
TCF4-228ENST00000565393 ANKLE1Q8NAG6 615 aa7.68□□□□□ -1.18
TCF4-228ENST00000565393 DIS3LQ8TF46 1054 aaKnown RBP7.68□□□□□ -1.18
TCF4-228ENST00000565393 APPBP2Q92624 585 aa7.68□□□□□ -1.18
TCF4-228ENST00000565393 LPAR1Q92633 364 aa7.68□□□□□ -1.18
TCF4-228ENST00000565393 USP6NLQ92738 828 aa7.68□□□□□ -1.18
TCF4-228ENST00000565393 OSBP2Q969R2 916 aa7.68□□□□□ -1.18
TCF4-228ENST00000565393 APBA2Q99767 749 aa7.68□□□□□ -1.18
TCF4-228ENST00000565393 MOV10L1Q9BXT6 1211 aaKnown RBP7.68□□□□□ -1.18
TCF4-228ENST00000565393 C11orf49Q9H6J7 331 aa7.68□□□□□ -1.18
TCF4-228ENST00000565393 VCPKMTQ9H867 229 aa7.68□□□□□ -1.18
TCF4-228ENST00000565393 ZNF287Q9HBT7 754 aa7.68□□□□□ -1.18
TCF4-228ENST00000565393 SLC5A4Q9NY91 659 aa7.68□□□□□ -1.18
TCF4-228ENST00000565393 ARPP21Q9UBL0 812 aaPredicted RBP7.68□□□□□ -1.18
TCF4-228ENST00000565393 STAP2Q9UGK3 403 aa7.68□□□□□ -1.18
TCF4-228ENST00000565393 GNAT2P19087 354 aa7.67□□□□□ -1.18
TCF4-228ENST00000565393 CYP2C19P33261 490 aa7.67□□□□□ -1.18
TCF4-228ENST00000565393 SBK1Q52WX2 424 aa7.67□□□□□ -1.18
TCF4-228ENST00000565393 MAP3K21Q5TCX8 1036 aa7.67□□□□□ -1.18
TCF4-228ENST00000565393 GIMAP6Q6P9H5 292 aa7.67□□□□□ -1.18
TCF4-228ENST00000565393 C7orf61Q8IZ16 206 aa7.67□□□□□ -1.18
TCF4-228ENST00000565393 MB21D1Q8N884 522 aa7.67□□□□□ -1.18
TCF4-228ENST00000565393 NPLOC4Q8TAT6 608 aa7.67□□□□□ -1.18
TCF4-228ENST00000565393 ATG4CQ96DT6 458 aa7.67□□□□□ -1.18
TCF4-228ENST00000565393 CRBNQ96SW2 442 aa7.67□□□□□ -1.18
TCF4-228ENST00000565393 FSD1Q9BTV5 496 aa7.67□□□□□ -1.18
TCF4-228ENST00000565393 NACAP1Q9BZK3 213 aa7.67□□□□□ -1.18
TCF4-228ENST00000565393 SPATC1LQ9H0A9 340 aa7.67□□□□□ -1.18
TCF4-228ENST00000565393 MROH8Q9H579 483 aa7.67□□□□□ -1.18
TCF4-228ENST00000565393 GOPCQ9HD26 462 aa7.67□□□□□ -1.18
TCF4-228ENST00000565393 PCDH10Q9P2E7 1040 aa7.67□□□□□ -1.18
TCF4-228ENST00000565393 RBM27Q9P2N5 1060 aaKnown RBP7.67□□□□□ -1.18
TCF4-228ENST00000565393 CLIP2Q9UDT6 1046 aa7.67□□□□□ -1.18
TCF4-228ENST00000565393 OGDHLQ9ULD0 1010 aa7.67□□□□□ -1.18
TCF4-228ENST00000565393 CTDP1Q9Y5B0 961 aaPredicted RBP7.67□□□□□ -1.18
TCF4-228ENST00000565393 F5H6K3 240 aa7.66□□□□□ -1.18
TCF4-228ENST00000565393 M0R2C6 588 aa7.66□□□□□ -1.18
TCF4-228ENST00000565393 WDR46O15213 610 aaKnown RBP7.66□□□□□ -1.18
TCF4-228ENST00000565393 GPAA1O43292 621 aa7.66□□□□□ -1.18
TCF4-228ENST00000565393 PRDM1O75626 825 aa7.66□□□□□ -1.18
TCF4-228ENST00000565393 SLC3A2P08195 630 aaKnown RBP7.66□□□□□ -1.18
TCF4-228ENST00000565393 FCER1AP12319 257 aa7.66□□□□□ -1.18
TCF4-228ENST00000565393 SYN1P17600 705 aa7.66□□□□□ -1.18
TCF4-228ENST00000565393 ADORA2AP29274 412 aa7.66□□□□□ -1.18
TCF4-228ENST00000565393 STAT3P40763 770 aa7.66□□□□□ -1.18
TCF4-228ENST00000565393 RRP1P56182 461 aaKnown RBP7.66□□□□□ -1.18
TCF4-228ENST00000565393 KLRC3Q07444 240 aa7.66□□□□□ -1.18
TCF4-228ENST00000565393 PRAMEF19Q5SWL8 479 aa7.66□□□□□ -1.18
TCF4-228ENST00000565393 FAM83BQ5T0W9 1011 aa7.66□□□□□ -1.18
TCF4-228ENST00000565393 LHX8Q68G74 356 aa7.66□□□□□ -1.18
TCF4-228ENST00000565393 IFNL3Q8IZI9 196 aa7.66□□□□□ -1.18
TCF4-228ENST00000565393 OTUD7AQ8TE49 926 aaPredicted RBP7.66□□□□□ -1.18
TCF4-228ENST00000565393 SENP6Q9GZR1 1112 aaPredicted RBP7.66□□□□□ -1.18
TCF4-228ENST00000565393 FLRT1Q9NZU1 646 aa7.66□□□□□ -1.18
TCF4-228ENST00000565393 ZMYND8Q9ULU4 1186 aaPredicted RBP7.66□□□□□ -1.18
TCF4-228ENST00000565393 TTC41PQ6P2S7 1318 aa7.66□□□□□ -1.18
TCF4-228ENST00000565393 LAMB1P07942 1786 aa7.66□□□□□ -1.18
TCF4-228ENST00000565393 DOCK2Q92608 1830 aa7.66□□□□□ -1.18
TCF4-228ENST00000565393 ZSWIM8A7E2V4 1837 aa7.65□□□□□ -1.18
TCF4-228ENST00000565393 COBLO75128 1261 aa7.65□□□□□ -1.18
TCF4-228ENST00000565393 ZBED4O75132 1171 aa7.65□□□□□ -1.18
TCF4-228ENST00000565393 SLC25A27O95847 323 aa7.65□□□□□ -1.18
TCF4-228ENST00000565393 HOXC6P09630 235 aa7.65□□□□□ -1.18
TCF4-228ENST00000565393 MX1P20591 662 aa7.65□□□□□ -1.18
TCF4-228ENST00000565393 RASA1P20936 1047 aa7.65□□□□□ -1.18
TCF4-228ENST00000565393 FXR1P51114 621 aaKnown RBP eCLIP7.65□□□□□ -1.18
TCF4-228ENST00000565393 PDE4BQ07343 736 aa7.65□□□□□ -1.18
TCF4-228ENST00000565393 DOCK1Q14185 1865 aa7.65□□□□□ -1.18
TCF4-228ENST00000565393 GRB14Q14449 540 aa7.65□□□□□ -1.18
TCF4-228ENST00000565393 KCTD2Q14681 263 aa7.65□□□□□ -1.18
TCF4-228ENST00000565393 TMEM132BQ14DG7 1078 aa7.65□□□□□ -1.18
TCF4-228ENST00000565393 ARRDC4Q8NCT1 418 aa7.65□□□□□ -1.18
TCF4-228ENST00000565393 SHCBP1Q8NEM2 672 aa7.65□□□□□ -1.18
TCF4-228ENST00000565393 CHMP4CQ96CF2 233 aa7.65□□□□□ -1.18
TCF4-228ENST00000565393 DDX11Q96FC9 970 aa7.65□□□□□ -1.18
TCF4-228ENST00000565393 SEC62Q99442 399 aaKnown RBP7.65□□□□□ -1.18
TCF4-228ENST00000565393 MMP19Q99542 508 aa7.65□□□□□ -1.18
TCF4-228ENST00000565393 NUP88Q99567 741 aaPredicted RBP7.65□□□□□ -1.18
TCF4-228ENST00000565393 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.65□□□□□ -1.18
TCF4-228ENST00000565393 NAPBQ9H115 298 aa7.65□□□□□ -1.18
TCF4-228ENST00000565393 FBXO28Q9NVF7 368 aa7.65□□□□□ -1.18
TCF4-228ENST00000565393 NYAP2Q9P242 653 aa7.65□□□□□ -1.18
TCF4-228ENST00000565393 DDX20Q9UHI6 824 aaKnown RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms