RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 MAP3K21Q5TCX8 1036 aa17.68■□□□□ 0.42
USB1-210ENST00000565151 STK11IPQ8N1F8 1099 aa17.68■□□□□ 0.42
USB1-210ENST00000565151 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.68■□□□□ 0.42
USB1-210ENST00000565151 TMX2Q9Y320 296 aa17.68■□□□□ 0.42
USB1-210ENST00000565151 SMCHD1A6NHR9 2005 aa17.67■□□□□ 0.42
USB1-210ENST00000565151 SZT2Q5T011 3432 aa17.67■□□□□ 0.42
USB1-210ENST00000565151 HMGCRP04035 888 aa17.67■□□□□ 0.42
USB1-210ENST00000565151 PLEKHH3Q7Z736 793 aa17.67■□□□□ 0.42
USB1-210ENST00000565151 SPICE1Q8N0Z3 855 aa17.67■□□□□ 0.42
USB1-210ENST00000565151 FLRT1Q9NZU1 646 aa17.67■□□□□ 0.42
USB1-210ENST00000565151 ROBO3Q96MS0 1386 aa17.66■□□□□ 0.42
USB1-210ENST00000565151 H0YGN5 161 aa17.66■□□□□ 0.42
USB1-210ENST00000565151 XRCC5P13010 732 aaKnown RBP17.66■□□□□ 0.42
USB1-210ENST00000565151 EEF2P13639 858 aaKnown RBP17.66■□□□□ 0.42
USB1-210ENST00000565151 MX1P20591 662 aa17.66■□□□□ 0.42
USB1-210ENST00000565151 RASA1P20936 1047 aa17.66■□□□□ 0.42
USB1-210ENST00000565151 MAPK4P31152 587 aa17.66■□□□□ 0.42
USB1-210ENST00000565151 ICA1Q05084 483 aa17.66■□□□□ 0.42
USB1-210ENST00000565151 HDAC1Q13547 482 aaPredicted RBP17.66■□□□□ 0.42
USB1-210ENST00000565151 NKX2-3Q8TAU0 364 aa17.66■□□□□ 0.42
USB1-210ENST00000565151 DIS3LQ8TF46 1054 aaKnown RBP17.66■□□□□ 0.42
USB1-210ENST00000565151 GPATCH3Q96I76 525 aa17.66■□□□□ 0.42
USB1-210ENST00000565151 NUDT12Q9BQG2 462 aa17.66■□□□□ 0.42
USB1-210ENST00000565151 GLRX3O76003 335 aaKnown RBP17.65■□□□□ 0.42
USB1-210ENST00000565151 IGHA2P01877 340 aa17.65■□□□□ 0.42
USB1-210ENST00000565151 COG2Q14746 738 aa17.65■□□□□ 0.42
USB1-210ENST00000565151 ANKRD45Q5TZF3 282 aa17.65■□□□□ 0.42
USB1-210ENST00000565151 GTF3C2Q8WUA4 911 aaPredicted RBP17.65■□□□□ 0.42
USB1-210ENST00000565151 CCDC17Q96LX7 622 aa17.65■□□□□ 0.42
USB1-210ENST00000565151 VCPKMTQ9H867 229 aa17.65■□□□□ 0.42
USB1-210ENST00000565151 FBXO28Q9NVF7 368 aa17.65■□□□□ 0.42
USB1-210ENST00000565151 ARPP21Q9UBL0 812 aaPredicted RBP17.65■□□□□ 0.42
USB1-210ENST00000565151 MINDY4BA8MYZ0 360 aa17.64■□□□□ 0.41
USB1-210ENST00000565151 FARP2O94887 1054 aaPredicted RBP17.64■□□□□ 0.41
USB1-210ENST00000565151 ZFYP08048 801 aaPredicted RBP17.64■□□□□ 0.41
USB1-210ENST00000565151 PTPREP23469 700 aa17.64■□□□□ 0.41
USB1-210ENST00000565151 CACNB2Q08289 660 aaPredicted RBP17.64■□□□□ 0.41
USB1-210ENST00000565151 ZMYM1Q5SVZ6 1142 aa17.64■□□□□ 0.41
USB1-210ENST00000565151 GIMAP6Q6P9H5 292 aa17.64■□□□□ 0.41
USB1-210ENST00000565151 CCDC129Q6ZRS4 1044 aa17.64■□□□□ 0.41
USB1-210ENST00000565151 NPLOC4Q8TAT6 608 aa17.64■□□□□ 0.41
USB1-210ENST00000565151 SOCS4Q8WXH5 440 aa17.64■□□□□ 0.41
USB1-210ENST00000565151 ATG4CQ96DT6 458 aa17.64■□□□□ 0.41
USB1-210ENST00000565151 MOV10L1Q9BXT6 1211 aaKnown RBP17.64■□□□□ 0.41
USB1-210ENST00000565151 STAP2Q9UGK3 403 aa17.64■□□□□ 0.41
USB1-210ENST00000565151 TACC3Q9Y6A5 838 aa17.64■□□□□ 0.41
USB1-210ENST00000565151 RPTORQ8N122 1335 aa17.64■□□□□ 0.41
USB1-210ENST00000565151 IGKV6D-41A0A0C4DH26 115 aa17.63■□□□□ 0.41
USB1-210ENST00000565151 PATL2C9JE40 543 aaKnown RBP17.63■□□□□ 0.41
USB1-210ENST00000565151 IGHDP01880 384 aa17.63■□□□□ 0.41
USB1-210ENST00000565151 TFRCP02786 760 aaKnown RBP17.63■□□□□ 0.41
USB1-210ENST00000565151 PRKAR2AP13861 404 aaKnown RBP17.63■□□□□ 0.41
USB1-210ENST00000565151 CCND3P30281 292 aaPredicted RBP17.63■□□□□ 0.41
USB1-210ENST00000565151 DSG3P32926 999 aa17.63■□□□□ 0.41
USB1-210ENST00000565151 MAP2K5Q13163 448 aa17.63■□□□□ 0.41
USB1-210ENST00000565151 IFNL3Q8IZI9 196 aa17.63■□□□□ 0.41
USB1-210ENST00000565151 TANGO6Q9C0B7 1094 aa17.63■□□□□ 0.41
USB1-210ENST00000565151 ADAMTS5Q9UNA0 930 aa17.63■□□□□ 0.41
USB1-210ENST00000565151 PRDM1O75626 825 aa17.62■□□□□ 0.41
USB1-210ENST00000565151 GRB14Q14449 540 aa17.62■□□□□ 0.41
USB1-210ENST00000565151 PAWRQ96IZ0 340 aaKnown RBP17.62■□□□□ 0.41
USB1-210ENST00000565151 KANSL2Q9H9L4 492 aa17.62■□□□□ 0.41
USB1-210ENST00000565151 ARHGEF10LQ9HCE6 1279 aa17.62■□□□□ 0.41
USB1-210ENST00000565151 HMX1Q9NP08 348 aaPredicted RBP17.62■□□□□ 0.41
USB1-210ENST00000565151 COLQQ9Y215 455 aaPredicted RBP17.62■□□□□ 0.41
USB1-210ENST00000565151 MCM3APO60318 1980 aa17.62■□□□□ 0.41
USB1-210ENST00000565151 SLC15A5A6NIM6 579 aa17.61■□□□□ 0.41
USB1-210ENST00000565151 ERC2O15083 957 aa17.61■□□□□ 0.41
USB1-210ENST00000565151 RGS2P41220 211 aa17.61■□□□□ 0.41
USB1-210ENST00000565151 PDE1AP54750 535 aa17.61■□□□□ 0.41
USB1-210ENST00000565151 ATP2B2Q01814 1243 aa17.61■□□□□ 0.41
USB1-210ENST00000565151 TMEM132BQ14DG7 1078 aa17.61■□□□□ 0.41
USB1-210ENST00000565151 HABP4Q5JVS0 413 aaKnown RBP17.61■□□□□ 0.41
USB1-210ENST00000565151 LHX8Q68G74 356 aa17.61■□□□□ 0.41
USB1-210ENST00000565151 TRPV1Q8NER1 839 aa17.61■□□□□ 0.41
USB1-210ENST00000565151 EXOC6Q8TAG9 804 aa17.61■□□□□ 0.41
USB1-210ENST00000565151 LPAR1Q92633 364 aa17.61■□□□□ 0.41
USB1-210ENST00000565151 DDRGK1Q96HY6 314 aa17.61■□□□□ 0.41
USB1-210ENST00000565151 NUP88Q99567 741 aaPredicted RBP17.61■□□□□ 0.41
USB1-210ENST00000565151 APBA2Q99767 749 aa17.61■□□□□ 0.41
USB1-210ENST00000565151 FSD1Q9BTV5 496 aa17.61■□□□□ 0.41
USB1-210ENST00000565151 SPATC1LQ9H0A9 340 aa17.61■□□□□ 0.41
USB1-210ENST00000565151 INCENPQ9NQS7 918 aa17.61■□□□□ 0.41
USB1-210ENST00000565151 HOXC10Q9NYD6 342 aa17.61■□□□□ 0.41
USB1-210ENST00000565151 LAMA3Q16787 3333 aa17.61■□□□□ 0.41
USB1-210ENST00000565151 TRIOBPQ9H2D6 2365 aa17.61■□□□□ 0.41
USB1-210ENST00000565151 WDR46O15213 610 aaKnown RBP17.6■□□□□ 0.41
USB1-210ENST00000565151 COBLO75128 1261 aa17.6■□□□□ 0.41
USB1-210ENST00000565151 FLOT1O75955 427 aa17.6■□□□□ 0.41
USB1-210ENST00000565151 HOXC6P09630 235 aa17.6■□□□□ 0.41
USB1-210ENST00000565151 ZKSCAN1P17029 563 aaPredicted RBP17.6■□□□□ 0.41
USB1-210ENST00000565151 VPS53Q5VIR6 699 aa17.6■□□□□ 0.41
USB1-210ENST00000565151 WDR78Q5VTH9 848 aa17.6■□□□□ 0.41
USB1-210ENST00000565151 AMOTL1Q8IY63 956 aa17.6■□□□□ 0.41
USB1-210ENST00000565151 REPS2Q8NFH8 660 aa17.6■□□□□ 0.41
USB1-210ENST00000565151 GCC1Q96CN9 775 aa17.6■□□□□ 0.41
USB1-210ENST00000565151 LNPKQ9C0E8 428 aa17.6■□□□□ 0.41
USB1-210ENST00000565151 PCDH10Q9P2E7 1040 aa17.6■□□□□ 0.41
USB1-210ENST00000565151 OGDHLQ9ULD0 1010 aa17.6■□□□□ 0.41
USB1-210ENST00000565151 ERCC3P19447 782 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms