RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 C3orf67Q6ZVT6 689 aa17.57■□□□□ 0.4
GTF3C1-205ENST00000564747 CREBRFQ8IUR6 639 aa17.57■□□□□ 0.4
GTF3C1-205ENST00000564747 GPR161Q8N6U8 529 aaKnown RBP17.57■□□□□ 0.4
GTF3C1-205ENST00000564747 USP17L12C9JPN9 530 aa17.57■□□□□ 0.4
GTF3C1-205ENST00000564747 USP17L21D6R901 530 aa17.57■□□□□ 0.4
GTF3C1-205ENST00000564747 SASH3O75995 380 aa17.57■□□□□ 0.4
GTF3C1-205ENST00000564747 VEGFAP15692 232 aaPredicted RBP17.57■□□□□ 0.4
GTF3C1-205ENST00000564747 CASP14P31944 242 aa17.57■□□□□ 0.4
GTF3C1-205ENST00000564747 ITPK1Q13572 414 aa17.57■□□□□ 0.4
GTF3C1-205ENST00000564747 SRBD1Q8N5C6 995 aaKnown RBP17.57■□□□□ 0.4
GTF3C1-205ENST00000564747 BRMS1Q9HCU9 246 aa17.57■□□□□ 0.4
GTF3C1-205ENST00000564747 GNL3LQ9NVN8 582 aaKnown RBP17.57■□□□□ 0.4
GTF3C1-205ENST00000564747 RBM28Q9NW13 759 aaKnown RBP17.57■□□□□ 0.4
GTF3C1-205ENST00000564747 ADAMTS3O15072 1205 aa17.56■□□□□ 0.4
GTF3C1-205ENST00000564747 TMTC3Q6ZXV5 915 aa17.56■□□□□ 0.4
GTF3C1-205ENST00000564747 PARD6BQ9BYG5 372 aa17.56■□□□□ 0.4
GTF3C1-205ENST00000564747 ZSWIM4Q9H7M6 989 aa17.56■□□□□ 0.4
GTF3C1-205ENST00000564747 CTNND2Q9UQB3 1225 aa17.56■□□□□ 0.4
GTF3C1-205ENST00000564747 LOC102724428A0A0B4J2F2 783 aa17.56■□□□□ 0.4
GTF3C1-205ENST00000564747 BMP15O95972 392 aa17.56■□□□□ 0.4
GTF3C1-205ENST00000564747 SIK1P57059 783 aa17.56■□□□□ 0.4
GTF3C1-205ENST00000564747 CC2D1AQ6P1N0 951 aaPredicted RBP17.56■□□□□ 0.4
GTF3C1-205ENST00000564747 CDC5LQ99459 802 aaKnown RBP17.56■□□□□ 0.4
GTF3C1-205ENST00000564747 BRIP1Q9BX63 1249 aa17.56■□□□□ 0.4
GTF3C1-205ENST00000564747 CICQ96RK0 1608 aaPredicted RBP17.55■□□□□ 0.4
GTF3C1-205ENST00000564747 XDHP47989 1333 aa17.55■□□□□ 0.4
GTF3C1-205ENST00000564747 TBC1D8O95759 1140 aa17.55■□□□□ 0.4
GTF3C1-205ENST00000564747 CCT6AP40227 531 aaKnown RBP17.55■□□□□ 0.4
GTF3C1-205ENST00000564747 FXR1P51114 621 aaKnown RBP eCLIP17.55■□□□□ 0.4
GTF3C1-205ENST00000564747 ATP2C1P98194 919 aaPredicted RBP17.55■□□□□ 0.4
GTF3C1-205ENST00000564747 CTAGE1Q96RT6 745 aa17.55■□□□□ 0.4
GTF3C1-205ENST00000564747 MFAP3LO75121 409 aa17.55■□□□□ 0.4
GTF3C1-205ENST00000564747 FAM47AQ5JRC9 791 aa17.55■□□□□ 0.4
GTF3C1-205ENST00000564747 PIK3AP1Q6ZUJ8 805 aa17.55■□□□□ 0.4
GTF3C1-205ENST00000564747 DUOX1Q9NRD9 1551 aa17.54■□□□□ 0.4
GTF3C1-205ENST00000564747 CNTNAP5Q8WYK1 1306 aa17.54■□□□□ 0.4
GTF3C1-205ENST00000564747 GYPCP04921 128 aa17.54■□□□□ 0.4
GTF3C1-205ENST00000564747 FGRP09769 529 aa17.54■□□□□ 0.4
GTF3C1-205ENST00000564747 E2F4Q16254 413 aa17.54■□□□□ 0.4
GTF3C1-205ENST00000564747 IL17AQ16552 155 aa17.54■□□□□ 0.4
GTF3C1-205ENST00000564747 FILIP1LQ4L180 1135 aa17.54■□□□□ 0.4
GTF3C1-205ENST00000564747 ANKRD18AQ8IVF6 992 aa17.54■□□□□ 0.4
GTF3C1-205ENST00000564747 FAM84BQ96KN1 310 aaPredicted RBP17.54■□□□□ 0.4
GTF3C1-205ENST00000564747 MTRQ99707 1265 aa17.54■□□□□ 0.4
GTF3C1-205ENST00000564747 NAA15Q9BXJ9 866 aaKnown RBP17.54■□□□□ 0.4
GTF3C1-205ENST00000564747 POLR3GO15318 223 aaPredicted RBP17.54■□□□□ 0.4
GTF3C1-205ENST00000564747 CALM1P0DP23 149 aa17.54■□□□□ 0.4
GTF3C1-205ENST00000564747 CALM2P0DP24 149 aa17.54■□□□□ 0.4
GTF3C1-205ENST00000564747 CALM3P0DP25 149 aa17.54■□□□□ 0.4
GTF3C1-205ENST00000564747 MCM7P33993 719 aa17.54■□□□□ 0.4
GTF3C1-205ENST00000564747 CAVIN4Q5BKX8 364 aa17.54■□□□□ 0.4
GTF3C1-205ENST00000564747 CACNA1SQ13698 1873 aa17.54■□□□□ 0.4
GTF3C1-205ENST00000564747 NLRP5P59047 1200 aa17.53■□□□□ 0.4
GTF3C1-205ENST00000564747 UBE4AQ14139 1066 aa17.53■□□□□ 0.4
GTF3C1-205ENST00000564747 ERFEQ4G0M1 354 aa17.53■□□□□ 0.4
GTF3C1-205ENST00000564747 RRAGBQ5VZM2 374 aa17.53■□□□□ 0.4
GTF3C1-205ENST00000564747 IQUBQ8NA54 791 aa17.53■□□□□ 0.4
GTF3C1-205ENST00000564747 RABGGTAQ92696 567 aa17.53■□□□□ 0.4
GTF3C1-205ENST00000564747 RNF225M0QZC1 329 aaPredicted RBP17.53■□□□□ 0.4
GTF3C1-205ENST00000564747 SEMA3EO15041 775 aa17.53■□□□□ 0.4
GTF3C1-205ENST00000564747 DDAH1O94760 285 aa17.53■□□□□ 0.4
GTF3C1-205ENST00000564747 CDC25AP30304 524 aa17.53■□□□□ 0.4
GTF3C1-205ENST00000564747 KRT31Q15323 416 aa17.53■□□□□ 0.4
GTF3C1-205ENST00000564747 RASGRP2Q7LDG7 609 aa17.53■□□□□ 0.4
GTF3C1-205ENST00000564747 GOLGA1Q92805 767 aa17.53■□□□□ 0.4
GTF3C1-205ENST00000564747 VPS16Q9H269 839 aa17.53■□□□□ 0.4
GTF3C1-205ENST00000564747 TAF1P21675 1872 aa17.53■□□□□ 0.4
GTF3C1-205ENST00000564747 MYH14Q7Z406 1995 aaKnown RBP17.52■□□□□ 0.4
GTF3C1-205ENST00000564747 KDM4FA0A1W2PPD8 638 aa17.52■□□□□ 0.4
GTF3C1-205ENST00000564747 ABL1P00519 1130 aa17.52■□□□□ 0.4
GTF3C1-205ENST00000564747 PDXDC2PQ6P474 469 aa17.52■□□□□ 0.4
GTF3C1-205ENST00000564747 CTCFLQ8NI51 663 aaPredicted RBP17.52■□□□□ 0.4
GTF3C1-205ENST00000564747 ZCCHC17Q9NP64 241 aaKnown RBP17.52■□□□□ 0.4
GTF3C1-205ENST00000564747 CALCOCO1Q9P1Z2 691 aa17.52■□□□□ 0.4
GTF3C1-205ENST00000564747 MINPP1Q9UNW1 487 aa17.52■□□□□ 0.4
GTF3C1-205ENST00000564747 PHLPP1O60346 1717 aa17.52■□□□□ 0.4
GTF3C1-205ENST00000564747 KIF5CO60282 957 aa17.52■□□□□ 0.4
GTF3C1-205ENST00000564747 KLRK1P26718 216 aa17.52■□□□□ 0.4
GTF3C1-205ENST00000564747 ZNF569Q5MCW4 686 aa17.52■□□□□ 0.4
GTF3C1-205ENST00000564747 ACRBPQ8NEB7 543 aa17.52■□□□□ 0.4
GTF3C1-205ENST00000564747 ARFGAP3Q9NP61 516 aa17.52■□□□□ 0.4
GTF3C1-205ENST00000564747 PUF60Q9UHX1 559 aaKnown RBP17.52■□□□□ 0.4
GTF3C1-205ENST00000564747 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.52■□□□□ 0.4
GTF3C1-205ENST00000564747 N4BP3O15049 544 aa17.51■□□□□ 0.39
GTF3C1-205ENST00000564747 ATP8B1O43520 1251 aa17.51■□□□□ 0.39
GTF3C1-205ENST00000564747 SCG2P13521 617 aa17.51■□□□□ 0.39
GTF3C1-205ENST00000564747 BSDC1Q9NW68 430 aaPredicted RBP17.51■□□□□ 0.39
GTF3C1-205ENST00000564747 MAPK8IP1Q9UQF2 711 aa17.51■□□□□ 0.39
GTF3C1-205ENST00000564747 DOT1LQ8TEK3 1739 aa17.51■□□□□ 0.39
GTF3C1-205ENST00000564747 CYP2D6P10635 497 aa17.51■□□□□ 0.39
GTF3C1-205ENST00000564747 TXLNAP40222 546 aa17.51■□□□□ 0.39
GTF3C1-205ENST00000564747 CNGA4Q8IV77 575 aa17.51■□□□□ 0.39
GTF3C1-205ENST00000564747 NSUN4Q96CB9 384 aaKnown RBP17.51■□□□□ 0.39
GTF3C1-205ENST00000564747 LRRC10BA6NIK2 292 aa17.51■□□□□ 0.39
GTF3C1-205ENST00000564747 CYP2C19P33261 490 aa17.51■□□□□ 0.39
GTF3C1-205ENST00000564747 MECOMQ03112 1051 aa17.51■□□□□ 0.39
GTF3C1-205ENST00000564747 UBXN6Q9BZV1 441 aa17.51■□□□□ 0.39
GTF3C1-205ENST00000564747 TAB2Q9NYJ8 693 aa17.51■□□□□ 0.39
GTF3C1-205ENST00000564747 LIMA1Q9UHB6 759 aaKnown RBP17.51■□□□□ 0.39
GTF3C1-205ENST00000564747 TFRCP02786 760 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms