RNA–Protein interactions for RNA: ENST00000564680.5

TREML3P-202, Transcript of triggering receptor expressed on myeloid cells like 3, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene TREML3P, Length 978 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREML3P-202ENST00000564680 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.83□□□□□ -0.2
TREML3P-202ENST00000564680 TANGO6Q9C0B7 1094 aa13.83□□□□□ -0.2
TREML3P-202ENST00000564680 VCPKMTQ9H867 229 aa13.83□□□□□ -0.2
TREML3P-202ENST00000564680 CLIP2Q9UDT6 1046 aa13.83□□□□□ -0.2
TREML3P-202ENST00000564680 SYNPO2Q9UMS6 1093 aa13.83□□□□□ -0.2
TREML3P-202ENST00000564680 SLC45A1Q9Y2W3 748 aa13.83□□□□□ -0.2
TREML3P-202ENST00000564680 TMX2Q9Y320 296 aa13.83□□□□□ -0.2
TREML3P-202ENST00000564680 TNKSO95271 1327 aa13.83□□□□□ -0.2
TREML3P-202ENST00000564680 ZSWIM8A7E2V4 1837 aa13.83□□□□□ -0.2
TREML3P-202ENST00000564680 A0A1W2PRG0 241 aa13.82□□□□□ -0.2
TREML3P-202ENST00000564680 WDR46O15213 610 aaKnown RBP13.82□□□□□ -0.2
TREML3P-202ENST00000564680 OSBPP22059 807 aa13.82□□□□□ -0.2
TREML3P-202ENST00000564680 HSPA4P34932 840 aa13.82□□□□□ -0.2
TREML3P-202ENST00000564680 C8orf34Q49A92 452 aa13.82□□□□□ -0.2
TREML3P-202ENST00000564680 TREML2Q5T2D2 321 aa13.82□□□□□ -0.2
TREML3P-202ENST00000564680 STOX1Q6ZVD7 989 aa13.82□□□□□ -0.2
TREML3P-202ENST00000564680 SMCR8Q8TEV9 937 aaPredicted RBP13.82□□□□□ -0.2
TREML3P-202ENST00000564680 ZKSCAN3Q9BRR0 538 aa13.82□□□□□ -0.2
TREML3P-202ENST00000564680 ZFYVE28Q9HCC9 887 aa13.82□□□□□ -0.2
TREML3P-202ENST00000564680 TCP11L1Q9NUJ3 509 aa13.82□□□□□ -0.2
TREML3P-202ENST00000564680 WBP1LQ9NX94 342 aa13.82□□□□□ -0.2
TREML3P-202ENST00000564680 TAF6LQ9Y6J9 622 aa13.82□□□□□ -0.2
TREML3P-202ENST00000564680 TRPA1O75762 1119 aa13.81□□□□□ -0.2
TREML3P-202ENST00000564680 TOP1P11387 765 aaKnown RBP13.81□□□□□ -0.2
TREML3P-202ENST00000564680 MOGSQ13724 837 aa13.81□□□□□ -0.2
TREML3P-202ENST00000564680 MB21D2Q8IYB1 491 aaPredicted RBP13.81□□□□□ -0.2
TREML3P-202ENST00000564680 SPICE1Q8N0Z3 855 aa13.81□□□□□ -0.2
TREML3P-202ENST00000564680 ZSCAN10Q96SZ4 725 aaPredicted RBP13.81□□□□□ -0.2
TREML3P-202ENST00000564680 PTPN18Q99952 460 aa13.81□□□□□ -0.2
TREML3P-202ENST00000564680 RPAP3Q9H6T3 665 aaPredicted RBP13.81□□□□□ -0.2
TREML3P-202ENST00000564680 KAT14Q9H8E8 782 aa13.81□□□□□ -0.2
TREML3P-202ENST00000564680 EMILIN3Q9NT22 766 aa13.81□□□□□ -0.2
TREML3P-202ENST00000564680 RNF186Q9NXI6 227 aa13.81□□□□□ -0.2
TREML3P-202ENST00000564680 MTMR7Q9Y216 660 aa13.81□□□□□ -0.2
TREML3P-202ENST00000564680 USP17L15C9J2P7 530 aa13.8□□□□□ -0.2
TREML3P-202ENST00000564680 USP17L13C9JLJ4 530 aa13.8□□□□□ -0.2
TREML3P-202ENST00000564680 USP17L11C9JVI0 530 aa13.8□□□□□ -0.2
TREML3P-202ENST00000564680 USP17L18D6R9N7 530 aa13.8□□□□□ -0.2
TREML3P-202ENST00000564680 USP17L22D6RA61 530 aa13.8□□□□□ -0.2
TREML3P-202ENST00000564680 USP17L17D6RBQ6 530 aa13.8□□□□□ -0.2
TREML3P-202ENST00000564680 USP17L19D6RCP7 530 aa13.8□□□□□ -0.2
TREML3P-202ENST00000564680 USP17L20D6RJB6 530 aa13.8□□□□□ -0.2
TREML3P-202ENST00000564680 IFIT3O14879 490 aaKnown RBP13.8□□□□□ -0.2
TREML3P-202ENST00000564680 MCM5P33992 734 aa13.8□□□□□ -0.2
TREML3P-202ENST00000564680 USP17L24Q0WX57 530 aa13.8□□□□□ -0.2
TREML3P-202ENST00000564680 CRHR2Q13324 411 aa13.8□□□□□ -0.2
TREML3P-202ENST00000564680 CCDC96Q2M329 555 aa13.8□□□□□ -0.2
TREML3P-202ENST00000564680 IFIT1BQ5T764 474 aaKnown RBP13.8□□□□□ -0.2
TREML3P-202ENST00000564680 GPAT2Q6NUI2 795 aa13.8□□□□□ -0.2
TREML3P-202ENST00000564680 CYB5R4Q7L1T6 521 aa13.8□□□□□ -0.2
TREML3P-202ENST00000564680 GMCL1P1Q8NEA9 526 aa13.8□□□□□ -0.2
TREML3P-202ENST00000564680 JAKMIP1Q96N16 626 aaKnown RBP13.8□□□□□ -0.2
TREML3P-202ENST00000564680 NEK1Q96PY6 1258 aa13.8□□□□□ -0.2
TREML3P-202ENST00000564680 UPF2Q9HAU5 1272 aaKnown RBP13.8□□□□□ -0.2
TREML3P-202ENST00000564680 IL17RBQ9NRM6 502 aa13.8□□□□□ -0.2
TREML3P-202ENST00000564680 ZSWIM5Q9P217 1185 aa13.8□□□□□ -0.2
TREML3P-202ENST00000564680 PRC1O43663 620 aa13.79□□□□□ -0.2
TREML3P-202ENST00000564680 NDUFB10O96000 172 aa13.79□□□□□ -0.2
TREML3P-202ENST00000564680 HMGB1P09429 215 aaKnown RBP13.79□□□□□ -0.2
TREML3P-202ENST00000564680 PSMA5P28066 241 aa13.79□□□□□ -0.2
TREML3P-202ENST00000564680 WTAPQ15007 396 aa13.79□□□□□ -0.2
TREML3P-202ENST00000564680 TMEM67Q5HYA8 995 aa13.79□□□□□ -0.2
TREML3P-202ENST00000564680 SLFN13Q68D06 897 aa13.79□□□□□ -0.2
TREML3P-202ENST00000564680 SAMD1Q6SPF0 538 aaPredicted RBP13.79□□□□□ -0.2
TREML3P-202ENST00000564680 DGKHQ86XP1 1220 aa13.79□□□□□ -0.2
TREML3P-202ENST00000564680 ENAHQ8N8S7 591 aaPredicted RBP13.79□□□□□ -0.2
TREML3P-202ENST00000564680 GTF3C2Q8WUA4 911 aaPredicted RBP13.79□□□□□ -0.2
TREML3P-202ENST00000564680 TTC14Q96N46 770 aa13.79□□□□□ -0.2
TREML3P-202ENST00000564680 USP26Q9BXU7 913 aa13.79□□□□□ -0.2
TREML3P-202ENST00000564680 TSKSQ9UJT2 592 aa13.79□□□□□ -0.2
TREML3P-202ENST00000564680 PLXNA1Q9UIW2 1896 aa13.78□□□□□ -0.2
TREML3P-202ENST00000564680 F5H6K3 240 aa13.78□□□□□ -0.2
TREML3P-202ENST00000564680 FLOT1O75955 427 aa13.78□□□□□ -0.2
TREML3P-202ENST00000564680 TBC1D8O95759 1140 aa13.78□□□□□ -0.2
TREML3P-202ENST00000564680 SLC1A4P43007 532 aa13.78□□□□□ -0.2
TREML3P-202ENST00000564680 CTCFP49711 727 aaPredicted RBP13.78□□□□□ -0.2
TREML3P-202ENST00000564680 FGD1P98174 961 aa13.78□□□□□ -0.2
TREML3P-202ENST00000564680 KLRC3Q07444 240 aa13.78□□□□□ -0.2
TREML3P-202ENST00000564680 IKQ13123 557 aaPredicted RBP13.78□□□□□ -0.2
TREML3P-202ENST00000564680 TSGA10IPQ3SY00 556 aa13.78□□□□□ -0.2
TREML3P-202ENST00000564680 FAM83BQ5T0W9 1011 aa13.78□□□□□ -0.2
TREML3P-202ENST00000564680 BLOC1S2Q6QNY1 142 aa13.78□□□□□ -0.2
TREML3P-202ENST00000564680 CHST3Q7LGC8 479 aa13.78□□□□□ -0.2
TREML3P-202ENST00000564680 SIAH1Q8IUQ4 282 aa13.78□□□□□ -0.2
TREML3P-202ENST00000564680 RASEFQ8IZ41 740 aa13.78□□□□□ -0.2
TREML3P-202ENST00000564680 PNMA1Q8ND90 353 aa13.78□□□□□ -0.2
TREML3P-202ENST00000564680 MKL1Q969V6 931 aa13.78□□□□□ -0.2
TREML3P-202ENST00000564680 TMEM87BQ96K49 555 aa13.78□□□□□ -0.2
TREML3P-202ENST00000564680 TMEM47Q9BQJ4 181 aa13.78□□□□□ -0.2
TREML3P-202ENST00000564680 ASCC2Q9H1I8 757 aaPredicted RBP13.78□□□□□ -0.2
TREML3P-202ENST00000564680 SNX14Q9Y5W7 946 aa13.78□□□□□ -0.2
TREML3P-202ENST00000564680 WDR19Q8NEZ3 1342 aa13.78□□□□□ -0.2
TREML3P-202ENST00000564680 ZNFX1Q9P2E3 1918 aaKnown RBP13.78□□□□□ -0.2
TREML3P-202ENST00000564680 FOXN1O15353 648 aa13.77□□□□□ -0.21
TREML3P-202ENST00000564680 CYP2C8P10632 490 aa13.77□□□□□ -0.21
TREML3P-202ENST00000564680 BMP3P12645 472 aa13.77□□□□□ -0.21
TREML3P-202ENST00000564680 CASTP20810 708 aaKnown RBP13.77□□□□□ -0.21
TREML3P-202ENST00000564680 HOXA7P31268 230 aaPredicted RBP13.77□□□□□ -0.21
TREML3P-202ENST00000564680 NFXL1Q6ZNB6 911 aa13.77□□□□□ -0.21
TREML3P-202ENST00000564680 DOCK3Q8IZD9 2030 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms