RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 CACNB2Q08289 660 aaPredicted RBP14.63□□□□□ -0.07
GTF3C1-204ENST00000564664 SBK1Q52WX2 424 aa14.63□□□□□ -0.07
GTF3C1-204ENST00000564664 MFSD14CQ5VZR4 134 aa14.63□□□□□ -0.07
GTF3C1-204ENST00000564664 SHCBP1Q8NEM2 672 aa14.63□□□□□ -0.07
GTF3C1-204ENST00000564664 DYNLL2Q96FJ2 89 aa14.63□□□□□ -0.07
GTF3C1-204ENST00000564664 STRBPQ96SI9 672 aaKnown RBP14.63□□□□□ -0.07
GTF3C1-204ENST00000564664 PUS7LQ9H0K6 701 aaKnown RBP14.63□□□□□ -0.07
GTF3C1-204ENST00000564664 BTBD7Q9P203 1132 aa14.63□□□□□ -0.07
GTF3C1-204ENST00000564664 ARPP21Q9UBL0 812 aaPredicted RBP14.63□□□□□ -0.07
GTF3C1-204ENST00000564664 PLXNB2O15031 1838 aa14.63□□□□□ -0.07
GTF3C1-204ENST00000564664 DDX60LQ5H9U9 1706 aaKnown RBP14.63□□□□□ -0.07
GTF3C1-204ENST00000564664 NAV1Q8NEY1 1877 aa14.63□□□□□ -0.07
GTF3C1-204ENST00000564664 ERC2O15083 957 aa14.62□□□□□ -0.07
GTF3C1-204ENST00000564664 RNF113AO15541 343 aaKnown RBP14.62□□□□□ -0.07
GTF3C1-204ENST00000564664 GNAT2P19087 354 aa14.62□□□□□ -0.07
GTF3C1-204ENST00000564664 DSG3P32926 999 aa14.62□□□□□ -0.07
GTF3C1-204ENST00000564664 ICA1Q05084 483 aa14.62□□□□□ -0.07
GTF3C1-204ENST00000564664 TRIM32Q13049 653 aa14.62□□□□□ -0.07
GTF3C1-204ENST00000564664 GRB14Q14449 540 aa14.62□□□□□ -0.07
GTF3C1-204ENST00000564664 CTR9Q6PD62 1173 aa14.62□□□□□ -0.07
GTF3C1-204ENST00000564664 SIAH1Q8IUQ4 282 aa14.62□□□□□ -0.07
GTF3C1-204ENST00000564664 SLC44A5Q8NCS7 719 aa14.62□□□□□ -0.07
GTF3C1-204ENST00000564664 TANGO6Q9C0B7 1094 aa14.62□□□□□ -0.07
GTF3C1-204ENST00000564664 VCPKMTQ9H867 229 aa14.62□□□□□ -0.07
GTF3C1-204ENST00000564664 SLC5A4Q9NY91 659 aa14.62□□□□□ -0.07
GTF3C1-204ENST00000564664 TTC41PQ6P2S7 1318 aa14.62□□□□□ -0.07
GTF3C1-204ENST00000564664 A0A1W2PPC1 479 aa14.61□□□□□ -0.07
GTF3C1-204ENST00000564664 WDR46O15213 610 aaKnown RBP14.61□□□□□ -0.07
GTF3C1-204ENST00000564664 MSCO60682 206 aa14.61□□□□□ -0.07
GTF3C1-204ENST00000564664 AKR1B1P15121 316 aa14.61□□□□□ -0.07
GTF3C1-204ENST00000564664 FXR1P51114 621 aaKnown RBP eCLIP14.61□□□□□ -0.07
GTF3C1-204ENST00000564664 ATP2B2Q01814 1243 aa14.61□□□□□ -0.07
GTF3C1-204ENST00000564664 EVX2Q03828 476 aa14.61□□□□□ -0.07
GTF3C1-204ENST00000564664 SLFNL1Q499Z3 407 aa14.61□□□□□ -0.07
GTF3C1-204ENST00000564664 CHRDL2Q6WN34 429 aa14.61□□□□□ -0.07
GTF3C1-204ENST00000564664 APPBP2Q92624 585 aa14.61□□□□□ -0.07
GTF3C1-204ENST00000564664 SPATC1LQ9H0A9 340 aa14.61□□□□□ -0.07
GTF3C1-204ENST00000564664 MROH8Q9H579 483 aa14.61□□□□□ -0.07
GTF3C1-204ENST00000564664 ZNF287Q9HBT7 754 aa14.61□□□□□ -0.07
GTF3C1-204ENST00000564664 WDR78Q5VTH9 848 aa14.6□□□□□ -0.07
GTF3C1-204ENST00000564664 LHX8Q68G74 356 aa14.6□□□□□ -0.07
GTF3C1-204ENST00000564664 ABRAQ8N0Z2 381 aa14.6□□□□□ -0.07
GTF3C1-204ENST00000564664 MOV10L1Q9BXT6 1211 aaKnown RBP14.6□□□□□ -0.07
GTF3C1-204ENST00000564664 PRO3102Q9H379 93 aa14.6□□□□□ -0.07
GTF3C1-204ENST00000564664 C11orf49Q9H6J7 331 aa14.6□□□□□ -0.07
GTF3C1-204ENST00000564664 GOPCQ9HD26 462 aa14.6□□□□□ -0.07
GTF3C1-204ENST00000564664 ADAMTS5Q9UNA0 930 aa14.6□□□□□ -0.07
GTF3C1-204ENST00000564664 TRIOBPQ9H2D6 2365 aa14.6□□□□□ -0.07
GTF3C1-204ENST00000564664 MYH7P12883 1935 aa14.59□□□□□ -0.07
GTF3C1-204ENST00000564664 GSG1L2A8MUP6 293 aa14.59□□□□□ -0.07
GTF3C1-204ENST00000564664 PATL2C9JE40 543 aaKnown RBP14.59□□□□□ -0.07
GTF3C1-204ENST00000564664 FLOT1O75955 427 aa14.59□□□□□ -0.07
GTF3C1-204ENST00000564664 SLC25A27O95847 323 aa14.59□□□□□ -0.07
GTF3C1-204ENST00000564664 MNX1P50219 401 aaPredicted RBP14.59□□□□□ -0.07
GTF3C1-204ENST00000564664 CCL14Q16627 93 aa14.59□□□□□ -0.07
GTF3C1-204ENST00000564664 OLFML2BQ68BL8 750 aa14.59□□□□□ -0.07
GTF3C1-204ENST00000564664 DPP9Q86TI2 863 aa14.59□□□□□ -0.07
GTF3C1-204ENST00000564664 MKNK2Q9HBH9 465 aa14.59□□□□□ -0.07
GTF3C1-204ENST00000564664 RBM27Q9P2N5 1060 aaKnown RBP14.59□□□□□ -0.07
GTF3C1-204ENST00000564664 CYP2D7A0A087X1C5 515 aa14.58□□□□□ -0.08
GTF3C1-204ENST00000564664 IGHA2P01877 340 aa14.58□□□□□ -0.08
GTF3C1-204ENST00000564664 CHGBP05060 677 aa14.58□□□□□ -0.08
GTF3C1-204ENST00000564664 EEF2P13639 858 aaKnown RBP14.58□□□□□ -0.08
GTF3C1-204ENST00000564664 COPB2P35606 906 aa14.58□□□□□ -0.08
GTF3C1-204ENST00000564664 KIAA1755Q5JYT7 1200 aa14.58□□□□□ -0.08
GTF3C1-204ENST00000564664 DIS3LQ8TF46 1054 aaKnown RBP14.58□□□□□ -0.08
GTF3C1-204ENST00000564664 OSBP2Q969R2 916 aa14.58□□□□□ -0.08
GTF3C1-204ENST00000564664 NYAP2Q9P242 653 aa14.58□□□□□ -0.08
GTF3C1-204ENST00000564664 BAZ2AQ9UIF9 1905 aaKnown RBP14.57□□□□□ -0.08
GTF3C1-204ENST00000564664 COL6A1P12109 1028 aa14.57□□□□□ -0.08
GTF3C1-204ENST00000564664 ERCC3P19447 782 aa14.57□□□□□ -0.08
GTF3C1-204ENST00000564664 CCND3P30281 292 aaPredicted RBP14.57□□□□□ -0.08
GTF3C1-204ENST00000564664 BMP8BP34820 402 aa14.57□□□□□ -0.08
GTF3C1-204ENST00000564664 AAMPQ13685 434 aa14.57□□□□□ -0.08
GTF3C1-204ENST00000564664 TICAM2Q86XR7 235 aa14.57□□□□□ -0.08
GTF3C1-204ENST00000564664 ZNF444Q8N0Y2 327 aaPredicted RBP14.57□□□□□ -0.08
GTF3C1-204ENST00000564664 NACAP1Q9BZK3 213 aa14.57□□□□□ -0.08
GTF3C1-204ENST00000564664 ZBTB47Q9UFB7 747 aaPredicted RBP14.57□□□□□ -0.08
GTF3C1-204ENST00000564664 SYNPO2Q9UMS6 1093 aa14.57□□□□□ -0.08
GTF3C1-204ENST00000564664 PCDHB15Q9Y5E8 787 aa14.57□□□□□ -0.08
GTF3C1-204ENST00000564664 MYH8P13535 1937 aa14.56□□□□□ -0.08
GTF3C1-204ENST00000564664 MINDY4BA8MYZ0 360 aa14.56□□□□□ -0.08
GTF3C1-204ENST00000564664 GPAA1O43292 621 aa14.56□□□□□ -0.08
GTF3C1-204ENST00000564664 FCER1AP12319 257 aa14.56□□□□□ -0.08
GTF3C1-204ENST00000564664 ADORA2AP29274 412 aa14.56□□□□□ -0.08
GTF3C1-204ENST00000564664 SPICE1Q8N0Z3 855 aa14.56□□□□□ -0.08
GTF3C1-204ENST00000564664 NPLOC4Q8TAT6 608 aa14.56□□□□□ -0.08
GTF3C1-204ENST00000564664 FLRT1Q9NZU1 646 aa14.56□□□□□ -0.08
GTF3C1-204ENST00000564664 DDX20Q9UHI6 824 aaKnown RBP14.56□□□□□ -0.08
GTF3C1-204ENST00000564664 APPP05067 770 aa14.55□□□□□ -0.08
GTF3C1-204ENST00000564664 SLC3A2P08195 630 aaKnown RBP14.55□□□□□ -0.08
GTF3C1-204ENST00000564664 RASA1P20936 1047 aa14.55□□□□□ -0.08
GTF3C1-204ENST00000564664 TDO2P48775 406 aa14.55□□□□□ -0.08
GTF3C1-204ENST00000564664 PLS1Q14651 629 aa14.55□□□□□ -0.08
GTF3C1-204ENST00000564664 TMEM132BQ14DG7 1078 aa14.55□□□□□ -0.08
GTF3C1-204ENST00000564664 NCAPG2Q86XI2 1143 aa14.55□□□□□ -0.08
GTF3C1-204ENST00000564664 MKL1Q969V6 931 aa14.55□□□□□ -0.08
GTF3C1-204ENST00000564664 ATG4CQ96DT6 458 aa14.55□□□□□ -0.08
GTF3C1-204ENST00000564664 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.55□□□□□ -0.08
GTF3C1-204ENST00000564664 NRBP1Q9UHY1 535 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms