RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 SPATA20Q8TB22 786 aa8.65□□□□□ -1.02
ATXN3-249ENST00000564606 NUP133Q8WUM0 1156 aa8.65□□□□□ -1.02
ATXN3-249ENST00000564606 PHKBQ93100 1093 aa8.65□□□□□ -1.02
ATXN3-249ENST00000564606 FBXW7Q969H0 707 aa8.65□□□□□ -1.02
ATXN3-249ENST00000564606 NUP58Q9BVL2 599 aa8.65□□□□□ -1.02
ATXN3-249ENST00000564606 FANCLQ9NW38 375 aa8.65□□□□□ -1.02
ATXN3-249ENST00000564606 MAGEC2Q9UBF1 373 aaPredicted RBP8.65□□□□□ -1.02
ATXN3-249ENST00000564606 FBXO2Q9UK22 296 aaPredicted RBP8.65□□□□□ -1.02
ATXN3-249ENST00000564606 MAN1B1Q9UKM7 699 aa8.65□□□□□ -1.02
ATXN3-249ENST00000564606 WWC3Q9ULE0 1092 aa8.65□□□□□ -1.02
ATXN3-249ENST00000564606 ASAP1Q9ULH1 1129 aa8.65□□□□□ -1.02
ATXN3-249ENST00000564606 ANKRD36CQ5JPF3 1778 aa8.65□□□□□ -1.02
ATXN3-249ENST00000564606 MYH3P11055 1940 aa8.64□□□□□ -1.03
ATXN3-249ENST00000564606 COL14A1Q05707 1796 aaKnown RBP8.64□□□□□ -1.03
ATXN3-249ENST00000564606 TNKSO95271 1327 aa8.64□□□□□ -1.03
ATXN3-249ENST00000564606 NEDD4P46934 1319 aa8.64□□□□□ -1.03
ATXN3-249ENST00000564606 SYNRGQ9UMZ2 1314 aa8.64□□□□□ -1.03
ATXN3-249ENST00000564606 ARAP2Q8WZ64 1704 aa8.64□□□□□ -1.03
ATXN3-249ENST00000564606 A0A1B0GTH6 734 aa8.64□□□□□ -1.03
ATXN3-249ENST00000564606 BICDL2A1A5D9 508 aa8.64□□□□□ -1.03
ATXN3-249ENST00000564606 BTBD18B2RXH4 712 aa8.64□□□□□ -1.03
ATXN3-249ENST00000564606 GPR37O15354 613 aa8.64□□□□□ -1.03
ATXN3-249ENST00000564606 H2AFXP16104 143 aaPredicted RBP8.64□□□□□ -1.03
ATXN3-249ENST00000564606 ZNF18P17022 549 aa8.64□□□□□ -1.03
ATXN3-249ENST00000564606 KRT83P78385 493 aa8.64□□□□□ -1.03
ATXN3-249ENST00000564606 MDM2Q00987 491 aaPredicted RBP8.64□□□□□ -1.03
ATXN3-249ENST00000564606 TBX2Q13207 712 aaPredicted RBP8.64□□□□□ -1.03
ATXN3-249ENST00000564606 RASGRF1Q13972 1273 aa8.64□□□□□ -1.03
ATXN3-249ENST00000564606 ELF2Q15723 593 aa8.64□□□□□ -1.03
ATXN3-249ENST00000564606 WHAMMP3Q1A5X7 153 aa8.64□□□□□ -1.03
ATXN3-249ENST00000564606 CYP26C1Q6V0L0 522 aa8.64□□□□□ -1.03
ATXN3-249ENST00000564606 SLF2Q8IX21 1173 aa8.64□□□□□ -1.03
ATXN3-249ENST00000564606 RETREG2Q8NC44 543 aa8.64□□□□□ -1.03
ATXN3-249ENST00000564606 CCDC85AQ96PX6 553 aaPredicted RBP8.64□□□□□ -1.03
ATXN3-249ENST00000564606 PHF20Q9BVI0 1012 aa8.64□□□□□ -1.03
ATXN3-249ENST00000564606 ARMT1Q9H993 441 aa8.64□□□□□ -1.03
ATXN3-249ENST00000564606 BSDC1Q9NW68 430 aaPredicted RBP8.64□□□□□ -1.03
ATXN3-249ENST00000564606 RWDD2AQ9UIY3 292 aa8.64□□□□□ -1.03
ATXN3-249ENST00000564606 LRP5O75197 1615 aa8.64□□□□□ -1.03
ATXN3-249ENST00000564606 C4AP0C0L4 1744 aa8.63□□□□□ -1.03
ATXN3-249ENST00000564606 C4BP0C0L5 1744 aa8.63□□□□□ -1.03
ATXN3-249ENST00000564606 MROH7-TTC4A0A0A0MT08 1334 aa8.63□□□□□ -1.03
ATXN3-249ENST00000564606 CTAGE9A4FU28 777 aa8.63□□□□□ -1.03
ATXN3-249ENST00000564606 CCDC151A5D8V7 595 aa8.63□□□□□ -1.03
ATXN3-249ENST00000564606 hCG_1984214I3L0E3 225 aa8.63□□□□□ -1.03
ATXN3-249ENST00000564606 BAG3O95817 575 aa8.63□□□□□ -1.03
ATXN3-249ENST00000564606 FGRP09769 529 aa8.63□□□□□ -1.03
ATXN3-249ENST00000564606 EEF1GP26641 437 aaKnown RBP8.63□□□□□ -1.03
ATXN3-249ENST00000564606 NLRP5P59047 1200 aa8.63□□□□□ -1.03
ATXN3-249ENST00000564606 MAP3K9P80192 1104 aa8.63□□□□□ -1.03
ATXN3-249ENST00000564606 CTDSPL2Q05D32 466 aa8.63□□□□□ -1.03
ATXN3-249ENST00000564606 PPP2R3AQ06190 1150 aa8.63□□□□□ -1.03
ATXN3-249ENST00000564606 CKAP4Q07065 602 aaKnown RBP8.63□□□□□ -1.03
ATXN3-249ENST00000564606 NR1I3Q14994 352 aa8.63□□□□□ -1.03
ATXN3-249ENST00000564606 SF3B3Q15393 1217 aaKnown RBP8.63□□□□□ -1.03
ATXN3-249ENST00000564606 HLFQ16534 295 aa8.63□□□□□ -1.03
ATXN3-249ENST00000564606 SBK1Q52WX2 424 aa8.63□□□□□ -1.03
ATXN3-249ENST00000564606 HSP90B2PQ58FF3 399 aa8.63□□□□□ -1.03
ATXN3-249ENST00000564606 TTC38Q5R3I4 469 aa8.63□□□□□ -1.03
ATXN3-249ENST00000564606 WWC2Q6AWC2 1192 aa8.63□□□□□ -1.03
ATXN3-249ENST00000564606 DGKHQ86XP1 1220 aa8.63□□□□□ -1.03
ATXN3-249ENST00000564606 ZNF713Q8N859 430 aaPredicted RBP8.63□□□□□ -1.03
ATXN3-249ENST00000564606 RUBCNQ92622 972 aa8.63□□□□□ -1.03
ATXN3-249ENST00000564606 DDX17Q92841 729 aaKnown RBP8.63□□□□□ -1.03
ATXN3-249ENST00000564606 SYTL4Q96C24 671 aaPredicted RBP8.63□□□□□ -1.03
ATXN3-249ENST00000564606 AK8Q96MA6 479 aa8.63□□□□□ -1.03
ATXN3-249ENST00000564606 RAB34Q9BZG1 259 aa8.63□□□□□ -1.03
ATXN3-249ENST00000564606 KAT14Q9H8E8 782 aa8.63□□□□□ -1.03
ATXN3-249ENST00000564606 CABP5Q9NP86 173 aa8.63□□□□□ -1.03
ATXN3-249ENST00000564606 LUC7LQ9NQ29 371 aaKnown RBP8.63□□□□□ -1.03
ATXN3-249ENST00000564606 BTG4Q9NY30 223 aa8.63□□□□□ -1.03
ATXN3-249ENST00000564606 SERTAD1Q9UHV2 236 aa8.63□□□□□ -1.03
ATXN3-249ENST00000564606 ZBTB1Q9Y2K1 713 aa8.63□□□□□ -1.03
ATXN3-249ENST00000564606 DISP2A7MBM2 1401 aa8.63□□□□□ -1.03
ATXN3-249ENST00000564606 ZNF804BA4D1E1 1349 aa8.62□□□□□ -1.03
ATXN3-249ENST00000564606 A0A0U1RQG5 324 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-249ENST00000564606 SPDYE16A6NNV3 312 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-249ENST00000564606 MINDY4BA8MYZ0 360 aa8.62□□□□□ -1.03
ATXN3-249ENST00000564606 PSMA7O14818 248 aa8.62□□□□□ -1.03
ATXN3-249ENST00000564606 RANBP6O60518 1105 aaKnown RBP8.62□□□□□ -1.03
ATXN3-249ENST00000564606 CHGBP05060 677 aa8.62□□□□□ -1.03
ATXN3-249ENST00000564606 CYLC1P35663 651 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-249ENST00000564606 ATP6V1AP38606 617 aa8.62□□□□□ -1.03
ATXN3-249ENST00000564606 PRPHP41219 470 aa8.62□□□□□ -1.03
ATXN3-249ENST00000564606 ATP2C1P98194 919 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-249ENST00000564606 CHRNDQ07001 517 aa8.62□□□□□ -1.03
ATXN3-249ENST00000564606 PAK1Q13153 545 aa8.62□□□□□ -1.03
ATXN3-249ENST00000564606 SF3B2Q13435 895 aaKnown RBP8.62□□□□□ -1.03
ATXN3-249ENST00000564606 COL9A3Q14050 684 aaPredicted RBP8.62□□□□□ -1.03
ATXN3-249ENST00000564606 KCNB1Q14721 858 aa8.62□□□□□ -1.03
ATXN3-249ENST00000564606 DDB1Q16531 1140 aa8.62□□□□□ -1.03
ATXN3-249ENST00000564606 KMT5BQ4FZB7 885 aa8.62□□□□□ -1.03
ATXN3-249ENST00000564606 STK11IPQ8N1F8 1099 aa8.62□□□□□ -1.03
ATXN3-249ENST00000564606 IGSF22Q8N9C0 903 aa8.62□□□□□ -1.03
ATXN3-249ENST00000564606 RASSF8Q8NHQ8 419 aa8.62□□□□□ -1.03
ATXN3-249ENST00000564606 HNRNPLLQ8WVV9 542 aaKnown RBP8.62□□□□□ -1.03
ATXN3-249ENST00000564606 NAP1L4Q99733 375 aaKnown RBP8.62□□□□□ -1.03
ATXN3-249ENST00000564606 TSGA10Q9BZW7 698 aa8.62□□□□□ -1.03
ATXN3-249ENST00000564606 NBPF3Q9H094 633 aa8.62□□□□□ -1.03
ATXN3-249ENST00000564606 HAUS4Q9H6D7 363 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 2906.7 ms