RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 ZSCAN30Q86W11 494 aa5.79□□□□□ -1.48
CAPN3-212ENST00000564503 CHD1LQ86WJ1 897 aa5.79□□□□□ -1.48
CAPN3-212ENST00000564503 GAS2L3Q86XJ1 694 aa5.79□□□□□ -1.48
CAPN3-212ENST00000564503 SHISA5Q8N114 240 aa5.79□□□□□ -1.48
CAPN3-212ENST00000564503 FBXL6Q8N531 539 aa5.79□□□□□ -1.48
CAPN3-212ENST00000564503 DDX54Q8TDD1 881 aaKnown RBP5.79□□□□□ -1.48
CAPN3-212ENST00000564503 GCC1Q96CN9 775 aa5.79□□□□□ -1.48
CAPN3-212ENST00000564503 CSRNP1Q96S65 589 aa5.79□□□□□ -1.48
CAPN3-212ENST00000564503 RBCK1Q9BYM8 510 aa5.79□□□□□ -1.48
CAPN3-212ENST00000564503 ZFYVE1Q9HBF4 777 aa5.79□□□□□ -1.48
CAPN3-212ENST00000564503 ATG3Q9NT62 314 aa5.79□□□□□ -1.48
CAPN3-212ENST00000564503 PTCH1Q13635 1447 aa5.79□□□□□ -1.48
CAPN3-212ENST00000564503 PPIP5K1Q6PFW1 1433 aa5.79□□□□□ -1.48
CAPN3-212ENST00000564503 TMEM238LA0A1B0GVL6 79 aa5.78□□□□□ -1.48
CAPN3-212ENST00000564503 ZFYVE9O95405 1425 aa5.78□□□□□ -1.48
CAPN3-212ENST00000564503 HOXA10P31260 410 aaPredicted RBP5.78□□□□□ -1.48
CAPN3-212ENST00000564503 ZNF445P59923 1031 aa5.78□□□□□ -1.48
CAPN3-212ENST00000564503 PTPN12Q05209 780 aaKnown RBP5.78□□□□□ -1.48
CAPN3-212ENST00000564503 AKAP4Q5JQC9 854 aa5.78□□□□□ -1.48
CAPN3-212ENST00000564503 PRPF40BQ6NWY9 871 aaKnown RBP5.78□□□□□ -1.48
CAPN3-212ENST00000564503 DTX1Q86Y01 620 aa5.78□□□□□ -1.48
CAPN3-212ENST00000564503 TMEM57Q8N5G2 664 aa5.78□□□□□ -1.48
CAPN3-212ENST00000564503 GIMAP7Q8NHV1 300 aa5.78□□□□□ -1.48
CAPN3-212ENST00000564503 EPS8L3Q8TE67 593 aaKnown RBP5.78□□□□□ -1.48
CAPN3-212ENST00000564503 EZH1Q92800 747 aaPredicted RBP5.78□□□□□ -1.48
CAPN3-212ENST00000564503 DMRTB1Q96MA1 342 aa5.78□□□□□ -1.48
CAPN3-212ENST00000564503 CORO1BQ9BR76 489 aa5.78□□□□□ -1.48
CAPN3-212ENST00000564503 KRTAP9-2Q9BYQ4 174 aa5.78□□□□□ -1.48
CAPN3-212ENST00000564503 ABCB6Q9NP58 842 aa5.78□□□□□ -1.48
CAPN3-212ENST00000564503 ZBTB40Q9NUA8 1239 aa5.78□□□□□ -1.48
CAPN3-212ENST00000564503 PIM2Q9P1W9 311 aa5.78□□□□□ -1.48
CAPN3-212ENST00000564503 PIK3R4Q99570 1358 aa5.78□□□□□ -1.48
CAPN3-212ENST00000564503 SETD1AO15047 1707 aaKnown RBP5.77□□□□□ -1.49
CAPN3-212ENST00000564503 BAG4O95429 457 aaKnown RBP5.77□□□□□ -1.49
CAPN3-212ENST00000564503 U2AF1L5P0DN76 240 aaPredicted RBP5.77□□□□□ -1.49
CAPN3-212ENST00000564503 ADMP35318 185 aa5.77□□□□□ -1.49
CAPN3-212ENST00000564503 TMPOP42166 694 aaKnown RBP5.77□□□□□ -1.49
CAPN3-212ENST00000564503 NUCB2P80303 420 aa5.77□□□□□ -1.49
CAPN3-212ENST00000564503 U2AF1Q01081 240 aaKnown RBP eCLIP5.77□□□□□ -1.49
CAPN3-212ENST00000564503 CALD1Q05682 793 aaKnown RBP5.77□□□□□ -1.49
CAPN3-212ENST00000564503 RPS26P11Q5JNZ5 115 aaPredicted RBP5.77□□□□□ -1.49
CAPN3-212ENST00000564503 HP1BP3Q5SSJ5 553 aaPredicted RBP5.77□□□□□ -1.49
CAPN3-212ENST00000564503 DYMQ7RTS9 669 aa5.77□□□□□ -1.49
CAPN3-212ENST00000564503 MTERF4Q7Z6M4 381 aaKnown RBP5.77□□□□□ -1.49
CAPN3-212ENST00000564503 GLIS3Q8NEA6 775 aa5.77□□□□□ -1.49
CAPN3-212ENST00000564503 SSH1Q8WYL5 1049 aa5.77□□□□□ -1.49
CAPN3-212ENST00000564503 TSR2Q969E8 191 aaKnown RBP5.77□□□□□ -1.49
CAPN3-212ENST00000564503 ZNF428Q96B54 188 aa5.77□□□□□ -1.49
CAPN3-212ENST00000564503 ALKBH8Q96BT7 664 aaKnown RBP5.77□□□□□ -1.49
CAPN3-212ENST00000564503 KIF2CQ99661 725 aa5.77□□□□□ -1.49
CAPN3-212ENST00000564503 OSBPL1AQ9BXW6 950 aa5.77□□□□□ -1.49
CAPN3-212ENST00000564503 RAD18Q9NS91 495 aa5.77□□□□□ -1.49
CAPN3-212ENST00000564503 NOB1Q9ULX3 412 aaKnown RBP5.77□□□□□ -1.49
CAPN3-212ENST00000564503 LEMD3Q9Y2U8 911 aa5.77□□□□□ -1.49
CAPN3-212ENST00000564503 ACTL7BQ9Y614 415 aa5.77□□□□□ -1.49
CAPN3-212ENST00000564503 OAS3Q9Y6K5 1087 aaKnown RBP5.77□□□□□ -1.49
CAPN3-212ENST00000564503 DDX49Q9Y6V7 483 aaKnown RBP5.77□□□□□ -1.49
CAPN3-212ENST00000564503 RPGRIP1LQ68CZ1 1315 aa5.76□□□□□ -1.49
CAPN3-212ENST00000564503 EVC2Q86UK5 1308 aa5.76□□□□□ -1.49
CAPN3-212ENST00000564503 FAM208AQ9UK61 1670 aaKnown RBP5.76□□□□□ -1.49
CAPN3-212ENST00000564503 FAM135BQ49AJ0 1406 aa5.76□□□□□ -1.49
CAPN3-212ENST00000564503 ASXL2Q76L83 1435 aa5.76□□□□□ -1.49
CAPN3-212ENST00000564503 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.76□□□□□ -1.49
CAPN3-212ENST00000564503 ZNF500O60304 480 aaPredicted RBP5.76□□□□□ -1.49
CAPN3-212ENST00000564503 CDC45O75419 566 aa5.76□□□□□ -1.49
CAPN3-212ENST00000564503 NFICP08651 508 aa5.76□□□□□ -1.49
CAPN3-212ENST00000564503 MCM5P33992 734 aa5.76□□□□□ -1.49
CAPN3-212ENST00000564503 TNNT2P45379 298 aaPredicted RBP5.76□□□□□ -1.49
CAPN3-212ENST00000564503 ZNF157P51786 506 aaPredicted RBP5.76□□□□□ -1.49
CAPN3-212ENST00000564503 GP2P55259 537 aaKnown RBP5.76□□□□□ -1.49
CAPN3-212ENST00000564503 FAAP100Q0VG06 881 aa5.76□□□□□ -1.49
CAPN3-212ENST00000564503 GRM2Q14416 872 aa5.76□□□□□ -1.49
CAPN3-212ENST00000564503 RABEP1Q15276 862 aa5.76□□□□□ -1.49
CAPN3-212ENST00000564503 TMC7Q7Z402 723 aa5.76□□□□□ -1.49
CAPN3-212ENST00000564503 PLEKHF1Q96S99 279 aa5.76□□□□□ -1.49
CAPN3-212ENST00000564503 YIPF2Q9BWQ6 316 aa5.76□□□□□ -1.49
CAPN3-212ENST00000564503 LNPKQ9C0E8 428 aa5.76□□□□□ -1.49
CAPN3-212ENST00000564503 SLC12A5Q9H2X9 1139 aa5.76□□□□□ -1.49
CAPN3-212ENST00000564503 C14orf93Q9H972 538 aaKnown RBP5.76□□□□□ -1.49
CAPN3-212ENST00000564503 BIN2Q9UBW5 565 aaPredicted RBP5.76□□□□□ -1.49
CAPN3-212ENST00000564503 PRKAG2Q9UGJ0 569 aa5.76□□□□□ -1.49
CAPN3-212ENST00000564503 TRAK1Q9UPV9 953 aa5.76□□□□□ -1.49
CAPN3-212ENST00000564503 GNEQ9Y223 722 aaKnown RBP5.76□□□□□ -1.49
CAPN3-212ENST00000564503 KIF24Q5T7B8 1368 aa5.76□□□□□ -1.49
CAPN3-212ENST00000564503 NRKQ7Z2Y5 1582 aa5.76□□□□□ -1.49
CAPN3-212ENST00000564503 ABCC3O15438 1527 aa5.75□□□□□ -1.49
CAPN3-212ENST00000564503 TMEM131LA2VDJ0 1609 aa5.75□□□□□ -1.49
CAPN3-212ENST00000564503 XRN1Q8IZH2 1706 aaKnown RBP5.75□□□□□ -1.49
CAPN3-212ENST00000564503 KIF3BO15066 747 aa5.75□□□□□ -1.49
CAPN3-212ENST00000564503 AOC2O75106 756 aa5.75□□□□□ -1.49
CAPN3-212ENST00000564503 BRD1O95696 1058 aa5.75□□□□□ -1.49
CAPN3-212ENST00000564503 WNT11O96014 354 aa5.75□□□□□ -1.49
CAPN3-212ENST00000564503 AP3B2Q13367 1082 aa5.75□□□□□ -1.49
CAPN3-212ENST00000564503 MCTP1Q6DN14 999 aa5.75□□□□□ -1.49
CAPN3-212ENST00000564503 ZAR1Q86SH2 424 aa5.75□□□□□ -1.49
CAPN3-212ENST00000564503 ARHGAP45Q92619 1136 aa5.75□□□□□ -1.49
CAPN3-212ENST00000564503 PDLIM2Q96JY6 352 aa5.75□□□□□ -1.49
CAPN3-212ENST00000564503 CWC22Q9HCG8 908 aaKnown RBP5.75□□□□□ -1.49
CAPN3-212ENST00000564503 FAM105AQ9NUU6 356 aa5.75□□□□□ -1.49
CAPN3-212ENST00000564503 NOL7Q9UMY1 257 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms