RNA–Protein interactions for RNA: ENST00000564011.5

LCMT1-204, Transcript of leucine carboxyl methyltransferase 1, humanhuman

TSL 5

Gene LCMT1, Length 1,168 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT1-204ENST00000564011 SNX17Q15036 470 aa12.69□□□□□ -0.38
LCMT1-204ENST00000564011 TTF1Q15361 905 aaPredicted RBP12.69□□□□□ -0.38
LCMT1-204ENST00000564011 TRIM60Q495X7 471 aa12.69□□□□□ -0.38
LCMT1-204ENST00000564011 NCAPG2Q86XI2 1143 aa12.69□□□□□ -0.38
LCMT1-204ENST00000564011 NUP133Q8WUM0 1156 aa12.69□□□□□ -0.38
LCMT1-204ENST00000564011 DDRGK1Q96HY6 314 aa12.69□□□□□ -0.38
LCMT1-204ENST00000564011 GAS2L1Q99501 681 aaPredicted RBP12.69□□□□□ -0.38
LCMT1-204ENST00000564011 SPATC1LQ9H0A9 340 aa12.69□□□□□ -0.38
LCMT1-204ENST00000564011 FLRT1Q9NZU1 646 aa12.69□□□□□ -0.38
LCMT1-204ENST00000564011 SWAP70Q9UH65 585 aa12.69□□□□□ -0.38
LCMT1-204ENST00000564011 MROH7Q68CQ1 1323 aa12.68□□□□□ -0.38
LCMT1-204ENST00000564011 PEX10O60683 326 aa12.68□□□□□ -0.38
LCMT1-204ENST00000564011 CNMDO75829 334 aa12.68□□□□□ -0.38
LCMT1-204ENST00000564011 CYP2E1P05181 493 aaPredicted RBP12.68□□□□□ -0.38
LCMT1-204ENST00000564011 ERCC3P19447 782 aa12.68□□□□□ -0.38
LCMT1-204ENST00000564011 ADCYAP1R1P41586 468 aa12.68□□□□□ -0.38
LCMT1-204ENST00000564011 FPGSQ05932 587 aa12.68□□□□□ -0.38
LCMT1-204ENST00000564011 KCTD2Q14681 263 aa12.68□□□□□ -0.38
LCMT1-204ENST00000564011 NPLOC4Q8TAT6 608 aa12.68□□□□□ -0.38
LCMT1-204ENST00000564011 MYLIPQ8WY64 445 aa12.68□□□□□ -0.38
LCMT1-204ENST00000564011 CRNKL1Q9BZJ0 848 aaKnown RBP12.68□□□□□ -0.38
LCMT1-204ENST00000564011 TSPYL2Q9H2G4 693 aaPredicted RBP12.68□□□□□ -0.38
LCMT1-204ENST00000564011 MTIF3Q9H2K0 278 aaKnown RBP12.68□□□□□ -0.38
LCMT1-204ENST00000564011 XPNPEP3Q9NQH7 507 aa12.68□□□□□ -0.38
LCMT1-204ENST00000564011 PDLIM7Q9NR12 457 aa12.68□□□□□ -0.38
LCMT1-204ENST00000564011 CNPY2Q9Y2B0 182 aa12.68□□□□□ -0.38
LCMT1-204ENST00000564011 ZNF236Q9UL36 1845 aa12.67□□□□□ -0.38
LCMT1-204ENST00000564011 TNFRSF10AO00220 468 aa12.67□□□□□ -0.38
LCMT1-204ENST00000564011 SURF6O75683 361 aaKnown RBP12.67□□□□□ -0.38
LCMT1-204ENST00000564011 FLOT1O75955 427 aa12.67□□□□□ -0.38
LCMT1-204ENST00000564011 TMEM179Q6ZVK1 233 aa12.67□□□□□ -0.38
LCMT1-204ENST00000564011 ERC1Q8IUD2 1116 aa12.67□□□□□ -0.38
LCMT1-204ENST00000564011 MAGEB6Q8N7X4 407 aa12.67□□□□□ -0.38
LCMT1-204ENST00000564011 MOV10L1Q9BXT6 1211 aaKnown RBP12.67□□□□□ -0.38
LCMT1-204ENST00000564011 SPC25Q9HBM1 224 aa12.67□□□□□ -0.38
LCMT1-204ENST00000564011 TMEM39AQ9NV64 488 aa12.67□□□□□ -0.38
LCMT1-204ENST00000564011 BTBD7Q9P203 1132 aa12.67□□□□□ -0.38
LCMT1-204ENST00000564011 AKR1A1P14550 325 aa12.66□□□□□ -0.38
LCMT1-204ENST00000564011 ZAP70P43403 619 aa12.66□□□□□ -0.38
LCMT1-204ENST00000564011 RARSP54136 660 aaKnown RBP12.66□□□□□ -0.38
LCMT1-204ENST00000564011 JAG1P78504 1218 aa12.66□□□□□ -0.38
LCMT1-204ENST00000564011 LRRC41Q15345 812 aa12.66□□□□□ -0.38
LCMT1-204ENST00000564011 C9orf50Q5SZB4 431 aa12.66□□□□□ -0.38
LCMT1-204ENST00000564011 MIGA1Q8NAN2 632 aa12.66□□□□□ -0.38
LCMT1-204ENST00000564011 FRAT1Q92837 279 aaPredicted RBP12.66□□□□□ -0.38
LCMT1-204ENST00000564011 FERMT2Q96AC1 680 aa12.66□□□□□ -0.38
LCMT1-204ENST00000564011 DBNDD2Q9BQY9 259 aa12.66□□□□□ -0.38
LCMT1-204ENST00000564011 TSEN34Q9BSV6 310 aaKnown RBP12.66□□□□□ -0.38
LCMT1-204ENST00000564011 PHF24Q9UPV7 400 aa12.66□□□□□ -0.38
LCMT1-204ENST00000564011 DIS3Q9Y2L1 958 aaKnown RBP12.66□□□□□ -0.38
LCMT1-204ENST00000564011 SIPA1L1O43166 1804 aa12.66□□□□□ -0.38
LCMT1-204ENST00000564011 LTBP2Q14767 1821 aa12.66□□□□□ -0.38
LCMT1-204ENST00000564011 MYH1P12882 1939 aa12.66□□□□□ -0.38
LCMT1-204ENST00000564011 MAGEB6P1A0A0J9YX57 407 aa12.65□□□□□ -0.38
LCMT1-204ENST00000564011 MOXD2PA6NHM9 499 aa12.65□□□□□ -0.38
LCMT1-204ENST00000564011 CCER2I3L3R5 266 aa12.65□□□□□ -0.38
LCMT1-204ENST00000564011 KIAA0355O15063 1070 aa12.65□□□□□ -0.38
LCMT1-204ENST00000564011 DYNLL1P63167 89 aaKnown RBP12.65□□□□□ -0.38
LCMT1-204ENST00000564011 TLE2Q04725 743 aa12.65□□□□□ -0.38
LCMT1-204ENST00000564011 HSP90AB4PQ58FF6 505 aa12.65□□□□□ -0.38
LCMT1-204ENST00000564011 CCDC129Q6ZRS4 1044 aa12.65□□□□□ -0.38
LCMT1-204ENST00000564011 ADGRA1Q86SQ6 560 aa12.65□□□□□ -0.38
LCMT1-204ENST00000564011 TRMT2AQ8IZ69 625 aaKnown RBP12.65□□□□□ -0.38
LCMT1-204ENST00000564011 MSL3Q8N5Y2 521 aaKnown RBP12.65□□□□□ -0.38
LCMT1-204ENST00000564011 ATXN2LQ8WWM7 1075 aaKnown RBP12.65□□□□□ -0.38
LCMT1-204ENST00000564011 CDCA7LQ96GN5 454 aa12.65□□□□□ -0.38
LCMT1-204ENST00000564011 MAML3Q96JK9 1138 aa12.65□□□□□ -0.38
LCMT1-204ENST00000564011 TOX2Q96NM4 488 aa12.65□□□□□ -0.38
LCMT1-204ENST00000564011 MMP19Q99542 508 aa12.65□□□□□ -0.38
LCMT1-204ENST00000564011 STARD7Q9NQZ5 370 aa12.65□□□□□ -0.38
LCMT1-204ENST00000564011 MCM9Q9NXL9 1143 aa12.65□□□□□ -0.38
LCMT1-204ENST00000564011 RAPGEFL1Q9UHV5 662 aa12.65□□□□□ -0.38
LCMT1-204ENST00000564011 CTDP1Q9Y5B0 961 aaPredicted RBP12.65□□□□□ -0.38
LCMT1-204ENST00000564011 CDK5RAP2Q96SN8 1893 aa12.64□□□□□ -0.39
LCMT1-204ENST00000564011 PNMA6EA0A0J9YXQ4 647 aa12.64□□□□□ -0.39
LCMT1-204ENST00000564011 WDR46O15213 610 aaKnown RBP12.64□□□□□ -0.39
LCMT1-204ENST00000564011 TLR3O15455 904 aaKnown RBP12.64□□□□□ -0.39
LCMT1-204ENST00000564011 PQBP1O60828 265 aaKnown RBP12.64□□□□□ -0.39
LCMT1-204ENST00000564011 DSG3P32926 999 aa12.64□□□□□ -0.39
LCMT1-204ENST00000564011 PPIGQ13427 754 aaKnown RBP eCLIP12.64□□□□□ -0.392e-7■■□□□ 11.8
LCMT1-204ENST00000564011 SEPT2Q15019 361 aa12.64□□□□□ -0.39
LCMT1-204ENST00000564011 ANO1Q5XXA6 986 aa12.64□□□□□ -0.39
LCMT1-204ENST00000564011 FTSJ3Q8IY81 847 aaKnown RBP12.64□□□□□ -0.39
LCMT1-204ENST00000564011 SLC44A5Q8NCS7 719 aa12.64□□□□□ -0.39
LCMT1-204ENST00000564011 TRPV1Q8NER1 839 aa12.64□□□□□ -0.39
LCMT1-204ENST00000564011 ACER1Q8TDN7 264 aa12.64□□□□□ -0.39
LCMT1-204ENST00000564011 TIFAQ96CG3 184 aa12.64□□□□□ -0.39
LCMT1-204ENST00000564011 CCDC17Q96LX7 622 aa12.64□□□□□ -0.39
LCMT1-204ENST00000564011 GLT1D1Q96MS3 346 aa12.64□□□□□ -0.39
LCMT1-204ENST00000564011 RLFQ13129 1914 aa12.64□□□□□ -0.39
LCMT1-204ENST00000564011 DNAJB2P25686 324 aa12.63□□□□□ -0.39
LCMT1-204ENST00000564011 ATP8B2P98198 1209 aa12.63□□□□□ -0.39
LCMT1-204ENST00000564011 FAM47AQ5JRC9 791 aa12.63□□□□□ -0.39
LCMT1-204ENST00000564011 ZKSCAN2Q63HK3 967 aa12.63□□□□□ -0.39
LCMT1-204ENST00000564011 PSRC1Q6PGN9 363 aaPredicted RBP12.63□□□□□ -0.39
LCMT1-204ENST00000564011 TMEM199Q8N511 208 aa12.63□□□□□ -0.39
LCMT1-204ENST00000564011 PCSK9Q8NBP7 692 aaKnown RBP12.63□□□□□ -0.39
LCMT1-204ENST00000564011 TINF2Q9BSI4 451 aa12.63□□□□□ -0.39
LCMT1-204ENST00000564011 TTYH1Q9H313 450 aaPredicted RBP12.63□□□□□ -0.39
LCMT1-204ENST00000564011 ZNF576Q9H609 170 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms