RNA–Protein interactions for RNA: ENST00000563741.5

SPSB3-204, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 5

Gene SPSB3, Length 1,746 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-204ENST00000563741 LDLRAD1Q5T700 205 aa22.57■■□□□ 1.2
SPSB3-204ENST00000563741 CATIPQ7Z7H3 387 aa22.57■■□□□ 1.2
SPSB3-204ENST00000563741 CCDC144CPQ8IYA2 1237 aa22.57■■□□□ 1.2
SPSB3-204ENST00000563741 NSUN7Q8NE18 718 aaKnown RBP22.57■■□□□ 1.2
SPSB3-204ENST00000563741 LLPHQ9BRT6 129 aaKnown RBP22.57■■□□□ 1.2
SPSB3-204ENST00000563741 MTMR4Q9NYA4 1195 aa22.57■■□□□ 1.2
SPSB3-204ENST00000563741 MPHOSPH10O00566 681 aaKnown RBP22.57■■□□□ 1.2
SPSB3-204ENST00000563741 DDAH1O94760 285 aa22.57■■□□□ 1.2
SPSB3-204ENST00000563741 CDC27P30260 824 aa22.57■■□□□ 1.2
SPSB3-204ENST00000563741 RASAL3Q86YV0 1011 aa22.57■■□□□ 1.2
SPSB3-204ENST00000563741 CLEC10AQ8IUN9 316 aa22.57■■□□□ 1.2
SPSB3-204ENST00000563741 KAT14Q9H8E8 782 aa22.57■■□□□ 1.2
SPSB3-204ENST00000563741 FAM217BQ9NTX9 383 aaPredicted RBP22.57■■□□□ 1.2
SPSB3-204ENST00000563741 CIZ1Q9ULV3 898 aaPredicted RBP22.57■■□□□ 1.2
SPSB3-204ENST00000563741 FZD1Q9UP38 647 aa22.57■■□□□ 1.2
SPSB3-204ENST00000563741 DHX16O60231 1041 aaKnown RBP22.56■■□□□ 1.2
SPSB3-204ENST00000563741 GDF11O95390 407 aa22.56■■□□□ 1.2
SPSB3-204ENST00000563741 GJB2P29033 226 aa22.56■■□□□ 1.2
SPSB3-204ENST00000563741 IREB2P48200 963 aaKnown RBP22.56■■□□□ 1.2
SPSB3-204ENST00000563741 MIGA2Q7L4E1 593 aa22.56■■□□□ 1.2
SPSB3-204ENST00000563741 SMARCC2Q8TAQ2 1214 aa22.56■■□□□ 1.2
SPSB3-204ENST00000563741 NUP133Q8WUM0 1156 aa22.56■■□□□ 1.2
SPSB3-204ENST00000563741 TMEM47Q9BQJ4 181 aa22.56■■□□□ 1.2
SPSB3-204ENST00000563741 CHMP5Q9NZZ3 219 aa22.56■■□□□ 1.2
SPSB3-204ENST00000563741 PTPDC1A2A3K4 754 aa22.55■■□□□ 1.2
SPSB3-204ENST00000563741 UNCXA6NJT0 531 aa22.55■■□□□ 1.2
SPSB3-204ENST00000563741 USP2O75604 605 aaPredicted RBP22.55■■□□□ 1.2
SPSB3-204ENST00000563741 PNMA1Q8ND90 353 aa22.55■■□□□ 1.2
SPSB3-204ENST00000563741 CHMP4CQ96CF2 233 aa22.55■■□□□ 1.2
SPSB3-204ENST00000563741 HOOK2Q96ED9 719 aa22.55■■□□□ 1.2
SPSB3-204ENST00000563741 ADD1P35611 737 aaKnown RBP22.54■■□□□ 1.2
SPSB3-204ENST00000563741 JAG1P78504 1218 aa22.54■■□□□ 1.2
SPSB3-204ENST00000563741 RTN1Q16799 776 aa22.54■■□□□ 1.2
SPSB3-204ENST00000563741 ABCB5Q2M3G0 1257 aa22.54■■□□□ 1.2
SPSB3-204ENST00000563741 TMEM179Q6ZVK1 233 aa22.54■■□□□ 1.2
SPSB3-204ENST00000563741 FANCBQ8NB91 859 aa22.54■■□□□ 1.2
SPSB3-204ENST00000563741 BEGAINQ9BUH8 593 aa22.54■■□□□ 1.2
SPSB3-204ENST00000563741 CPLX1O14810 134 aa22.54■■□□□ 1.2
SPSB3-204ENST00000563741 CALM1P0DP23 149 aa22.54■■□□□ 1.2
SPSB3-204ENST00000563741 CALM2P0DP24 149 aa22.54■■□□□ 1.2
SPSB3-204ENST00000563741 CALM3P0DP25 149 aa22.54■■□□□ 1.2
SPSB3-204ENST00000563741 GUCY1A2P33402 732 aa22.54■■□□□ 1.2
SPSB3-204ENST00000563741 ZIC5Q96T25 663 aa22.54■■□□□ 1.2
SPSB3-204ENST00000563741 TTLL1O95922 423 aa22.53■■□□□ 1.2
SPSB3-204ENST00000563741 GH2P01242 217 aa22.53■■□□□ 1.2
SPSB3-204ENST00000563741 TOP1P11387 765 aaKnown RBP22.53■■□□□ 1.2
SPSB3-204ENST00000563741 KIF23Q02241 960 aaPredicted RBP22.53■■□□□ 1.2
SPSB3-204ENST00000563741 PKP1Q13835 747 aa22.53■■□□□ 1.2
SPSB3-204ENST00000563741 FOXN1O15353 648 aa22.52■■□□□ 1.2
SPSB3-204ENST00000563741 PPFIA3O75145 1194 aa22.52■■□□□ 1.2
SPSB3-204ENST00000563741 SEPT2Q15019 361 aa22.52■■□□□ 1.2
SPSB3-204ENST00000563741 NTRK3Q16288 839 aa22.52■■□□□ 1.2
SPSB3-204ENST00000563741 SLC10A4Q96EP9 437 aa22.52■■□□□ 1.2
SPSB3-204ENST00000563741 DDX11Q96FC9 970 aa22.52■■□□□ 1.2
SPSB3-204ENST00000563741 HMGN5P82970 282 aaKnown RBP22.51■■□□□ 1.19
SPSB3-204ENST00000563741 PPP2R5BQ15173 497 aa22.51■■□□□ 1.19
SPSB3-204ENST00000563741 REM2Q8IYK8 340 aaPredicted RBP22.51■■□□□ 1.19
SPSB3-204ENST00000563741 ANKRD13AQ8IZ07 590 aa22.51■■□□□ 1.19
SPSB3-204ENST00000563741 KANSL2Q9H9L4 492 aa22.51■■□□□ 1.19
SPSB3-204ENST00000563741 CCDC196A0A1B0GTZ2 297 aa22.51■■□□□ 1.19
SPSB3-204ENST00000563741 PHF20L1A8MW92 1017 aa22.51■■□□□ 1.19
SPSB3-204ENST00000563741 ICA1Q05084 483 aa22.51■■□□□ 1.19
SPSB3-204ENST00000563741 PPP4R3BQ5MIZ7 849 aa22.51■■□□□ 1.19
SPSB3-204ENST00000563741 LRRC47Q8N1G4 583 aaKnown RBP22.51■■□□□ 1.19
SPSB3-204ENST00000563741 ZBTB21Q9ULJ3 1066 aa22.51■■□□□ 1.19
SPSB3-204ENST00000563741 OTOFQ9HC10 1997 aa22.5■■□□□ 1.19
SPSB3-204ENST00000563741 CDKL5O76039 1030 aa22.5■■□□□ 1.19
SPSB3-204ENST00000563741 DCAF15Q66K64 600 aa22.5■■□□□ 1.19
SPSB3-204ENST00000563741 CPLX2Q6PUV4 134 aaKnown RBP22.5■■□□□ 1.19
SPSB3-204ENST00000563741 CLMNQ96JQ2 1002 aa22.5■■□□□ 1.19
SPSB3-204ENST00000563741 CABP5Q9NP86 173 aa22.5■■□□□ 1.19
SPSB3-204ENST00000563741 CLIP2Q9UDT6 1046 aa22.5■■□□□ 1.19
SPSB3-204ENST00000563741 PCNTO95613 3336 aa22.5■■□□□ 1.19
SPSB3-204ENST00000563741 FDPSP14324 419 aaKnown RBP22.49■■□□□ 1.19
SPSB3-204ENST00000563741 CAP2P40123 477 aa22.49■■□□□ 1.19
SPSB3-204ENST00000563741 CTCFP49711 727 aaPredicted RBP22.49■■□□□ 1.19
SPSB3-204ENST00000563741 RAB3GAP1Q15042 981 aa22.49■■□□□ 1.19
SPSB3-204ENST00000563741 RASGRP2Q7LDG7 609 aa22.49■■□□□ 1.19
SPSB3-204ENST00000563741 CTCFLQ8NI51 663 aaPredicted RBP22.49■■□□□ 1.19
SPSB3-204ENST00000563741 MAP3K14Q99558 947 aa22.49■■□□□ 1.19
SPSB3-204ENST00000563741 RBM28Q9NW13 759 aaKnown RBP22.49■■□□□ 1.19
SPSB3-204ENST00000563741 NYAP2Q9P242 653 aa22.49■■□□□ 1.19
SPSB3-204ENST00000563741 EEF2P13639 858 aaKnown RBP22.48■■□□□ 1.19
SPSB3-204ENST00000563741 IFNAR1P17181 557 aa22.48■■□□□ 1.19
SPSB3-204ENST00000563741 SYT1P21579 422 aa22.48■■□□□ 1.19
SPSB3-204ENST00000563741 GRM4Q14833 912 aa22.48■■□□□ 1.19
SPSB3-204ENST00000563741 SIAH1Q8IUQ4 282 aa22.48■■□□□ 1.19
SPSB3-204ENST00000563741 CA12O43570 354 aa22.48■■□□□ 1.19
SPSB3-204ENST00000563741 PLEKHA8P1O95397 391 aa22.48■■□□□ 1.19
SPSB3-204ENST00000563741 MAP3K9P80192 1104 aa22.48■■□□□ 1.19
SPSB3-204ENST00000563741 NUCB2P80303 420 aa22.48■■□□□ 1.19
SPSB3-204ENST00000563741 SPRYD7Q5W111 196 aa22.48■■□□□ 1.19
SPSB3-204ENST00000563741 TMTC3Q6ZXV5 915 aa22.48■■□□□ 1.19
SPSB3-204ENST00000563741 CMTR1Q8N1G2 835 aaKnown RBP22.48■■□□□ 1.19
SPSB3-204ENST00000563741 PHKBQ93100 1093 aa22.48■■□□□ 1.19
SPSB3-204ENST00000563741 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.48■■□□□ 1.19
SPSB3-204ENST00000563741 KIF5BP33176 963 aa22.47■■□□□ 1.19
SPSB3-204ENST00000563741 ATP2B2Q01814 1243 aa22.47■■□□□ 1.19
SPSB3-204ENST00000563741 FUT2Q10981 343 aa22.47■■□□□ 1.19
SPSB3-204ENST00000563741 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.47■■□□□ 1.191e-7■■■□□ 19
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms