RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 PLA2G4AP47712 749 aa14.85□□□□□ -0.03
USB1-207ENST00000563149 TRIM14Q14142 442 aa14.85□□□□□ -0.03
USB1-207ENST00000563149 SF3B3Q15393 1217 aaKnown RBP14.85□□□□□ -0.03
USB1-207ENST00000563149 EARS2Q5JPH6 523 aaKnown RBP14.85□□□□□ -0.03
USB1-207ENST00000563149 CLEC4GQ6UXB4 293 aa14.85□□□□□ -0.03
USB1-207ENST00000563149 RASGRP2Q7LDG7 609 aa14.85□□□□□ -0.03
USB1-207ENST00000563149 FAM177A1Q8N128 213 aaPredicted RBP14.85□□□□□ -0.03
USB1-207ENST00000563149 BSDC1Q9NW68 430 aaPredicted RBP14.85□□□□□ -0.03
USB1-207ENST00000563149 LIMA1Q9UHB6 759 aaKnown RBP14.85□□□□□ -0.03
USB1-207ENST00000563149 PDS5AQ29RF7 1337 aaKnown RBP14.85□□□□□ -0.03
USB1-207ENST00000563149 A0A1B0GUL6 1792 aa14.84□□□□□ -0.03
USB1-207ENST00000563149 FAM205CA6NFA0 338 aa14.84□□□□□ -0.03
USB1-207ENST00000563149 MFAP3LO75121 409 aa14.84□□□□□ -0.03
USB1-207ENST00000563149 PLEKHA8P1O95397 391 aa14.84□□□□□ -0.03
USB1-207ENST00000563149 RBL2Q08999 1139 aa14.84□□□□□ -0.03
USB1-207ENST00000563149 NPY5RQ15761 445 aa14.84□□□□□ -0.03
USB1-207ENST00000563149 CEP112Q8N8E3 955 aa14.84□□□□□ -0.03
USB1-207ENST00000563149 CTCFLQ8NI51 663 aaPredicted RBP14.84□□□□□ -0.03
USB1-207ENST00000563149 CCDC12Q8WUD4 166 aaPredicted RBP14.84□□□□□ -0.03
USB1-207ENST00000563149 RMND1Q9NWS8 449 aa14.84□□□□□ -0.03
USB1-207ENST00000563149 TTF2Q9UNY4 1162 aaKnown RBP14.84□□□□□ -0.03
USB1-207ENST00000563149 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.84□□□□□ -0.03
USB1-207ENST00000563149 CNTNAP5Q8WYK1 1306 aa14.84□□□□□ -0.03
USB1-207ENST00000563149 MYH2Q9UKX2 1941 aa14.84□□□□□ -0.03
USB1-207ENST00000563149 ZNF335Q9H4Z2 1342 aaPredicted RBP14.83□□□□□ -0.03
USB1-207ENST00000563149 POTEB2H3BUK9 544 aa14.83□□□□□ -0.03
USB1-207ENST00000563149 ZBTB22O15209 634 aa14.83□□□□□ -0.03
USB1-207ENST00000563149 RGL2O15211 777 aa14.83□□□□□ -0.03
USB1-207ENST00000563149 GTPBP6O43824 516 aaPredicted RBP14.83□□□□□ -0.03
USB1-207ENST00000563149 KIF5CO60282 957 aa14.83□□□□□ -0.03
USB1-207ENST00000563149 SEMA3FQ13275 785 aa14.83□□□□□ -0.03
USB1-207ENST00000563149 ZNF174Q15697 407 aa14.83□□□□□ -0.03
USB1-207ENST00000563149 E2F4Q16254 413 aa14.83□□□□□ -0.03
USB1-207ENST00000563149 TEX35Q5T0J7 233 aa14.83□□□□□ -0.03
USB1-207ENST00000563149 ARL6IP4Q66PJ3 421 aaKnown RBP14.83□□□□□ -0.03
USB1-207ENST00000563149 CTR9Q6PD62 1173 aa14.83□□□□□ -0.03
USB1-207ENST00000563149 TMTC1Q8IUR5 882 aa14.83□□□□□ -0.03
USB1-207ENST00000563149 ANKRD20A12PQ8NF67 263 aa14.83□□□□□ -0.03
USB1-207ENST00000563149 RWDD2AQ9UIY3 292 aa14.83□□□□□ -0.03
USB1-207ENST00000563149 THRAP3Q9Y2W1 955 aaKnown RBP14.83□□□□□ -0.03
USB1-207ENST00000563149 LOC102724428A0A0B4J2F2 783 aa14.83□□□□□ -0.04
USB1-207ENST00000563149 PRDM1O75626 825 aa14.83□□□□□ -0.04
USB1-207ENST00000563149 SIK1P57059 783 aa14.83□□□□□ -0.04
USB1-207ENST00000563149 PTGDRQ13258 359 aa14.83□□□□□ -0.04
USB1-207ENST00000563149 KLHL10Q6JEL2 608 aa14.83□□□□□ -0.04
USB1-207ENST00000563149 CC2D1AQ6P1N0 951 aaPredicted RBP14.83□□□□□ -0.04
USB1-207ENST00000563149 UBXN6Q9BZV1 441 aa14.83□□□□□ -0.04
USB1-207ENST00000563149 MRPL44Q9H9J2 332 aaKnown RBP14.83□□□□□ -0.04
USB1-207ENST00000563149 SCN7AQ01118 1682 aa14.82□□□□□ -0.04
USB1-207ENST00000563149 SOWAHDA6NJG2 315 aa14.82□□□□□ -0.04
USB1-207ENST00000563149 SCG2P13521 617 aa14.82□□□□□ -0.04
USB1-207ENST00000563149 CALML3P27482 149 aa14.82□□□□□ -0.04
USB1-207ENST00000563149 LONP1P36776 959 aaKnown RBP14.82□□□□□ -0.04
USB1-207ENST00000563149 TXLNAP40222 546 aa14.82□□□□□ -0.04
USB1-207ENST00000563149 GYG1P46976 350 aa14.82□□□□□ -0.04
USB1-207ENST00000563149 STX17P56962 302 aa14.82□□□□□ -0.04
USB1-207ENST00000563149 DYNLL1P63167 89 aaKnown RBP14.82□□□□□ -0.04
USB1-207ENST00000563149 BRD3Q15059 726 aa14.82□□□□□ -0.04
USB1-207ENST00000563149 SBK1Q52WX2 424 aa14.82□□□□□ -0.04
USB1-207ENST00000563149 RAD9BQ6WBX8 426 aa14.82□□□□□ -0.04
USB1-207ENST00000563149 SRGAP1Q7Z6B7 1085 aa14.82□□□□□ -0.04
USB1-207ENST00000563149 DESI2Q9BSY9 194 aa14.82□□□□□ -0.04
USB1-207ENST00000563149 ARFGAP3Q9NP61 516 aa14.82□□□□□ -0.04
USB1-207ENST00000563149 SH3GLB2Q9NR46 395 aa14.82□□□□□ -0.04
USB1-207ENST00000563149 ATP8A2Q9NTI2 1148 aa14.82□□□□□ -0.04
USB1-207ENST00000563149 MYO1AQ9UBC5 1043 aa14.82□□□□□ -0.04
USB1-207ENST00000563149 COL1A1P02452 1464 aaPredicted RBP14.82□□□□□ -0.04
USB1-207ENST00000563149 NLRP5P59047 1200 aa14.81□□□□□ -0.04
USB1-207ENST00000563149 KARSQ15046 597 aaKnown RBP14.81□□□□□ -0.04
USB1-207ENST00000563149 PFKFB3Q16875 520 aaPredicted RBP14.81□□□□□ -0.04
USB1-207ENST00000563149 ZNF658Q5TYW1 1059 aaPredicted RBP14.81□□□□□ -0.04
USB1-207ENST00000563149 PDXDC2PQ6P474 469 aa14.81□□□□□ -0.04
USB1-207ENST00000563149 FBXO33Q7Z6M2 555 aa14.81□□□□□ -0.04
USB1-207ENST00000563149 SRBD1Q8N5C6 995 aaKnown RBP14.81□□□□□ -0.04
USB1-207ENST00000563149 FAM84BQ96KN1 310 aaPredicted RBP14.81□□□□□ -0.04
USB1-207ENST00000563149 CRNKL1Q9BZJ0 848 aaKnown RBP14.81□□□□□ -0.04
USB1-207ENST00000563149 CDC23Q9UJX2 597 aa14.81□□□□□ -0.04
USB1-207ENST00000563149 XDHP47989 1333 aa14.81□□□□□ -0.04
USB1-207ENST00000563149 CCDC151A5D8V7 595 aa14.8□□□□□ -0.04
USB1-207ENST00000563149 USP17L12C9JPN9 530 aa14.8□□□□□ -0.04
USB1-207ENST00000563149 USP17L21D6R901 530 aa14.8□□□□□ -0.04
USB1-207ENST00000563149 KIF5BP33176 963 aa14.8□□□□□ -0.04
USB1-207ENST00000563149 PAK1Q13153 545 aa14.8□□□□□ -0.04
USB1-207ENST00000563149 MTF1Q14872 753 aa14.8□□□□□ -0.04
USB1-207ENST00000563149 RRAGBQ5VZM2 374 aa14.8□□□□□ -0.04
USB1-207ENST00000563149 SMARCC1Q92922 1105 aaPredicted RBP14.8□□□□□ -0.04
USB1-207ENST00000563149 PARD6BQ9BYG5 372 aa14.8□□□□□ -0.04
USB1-207ENST00000563149 ARPP21Q9UBL0 812 aaPredicted RBP14.8□□□□□ -0.04
USB1-207ENST00000563149 CTNND2Q9UQB3 1225 aa14.8□□□□□ -0.04
USB1-207ENST00000563149 LAMB1P07942 1786 aa14.8□□□□□ -0.04
USB1-207ENST00000563149 COL16A1Q07092 1604 aaPredicted RBP14.8□□□□□ -0.04
USB1-207ENST00000563149 TBC1D8O95759 1140 aa14.8□□□□□ -0.04
USB1-207ENST00000563149 GYPCP04921 128 aa14.8□□□□□ -0.04
USB1-207ENST00000563149 CASP14P31944 242 aa14.8□□□□□ -0.04
USB1-207ENST00000563149 CYP2C19P33261 490 aa14.8□□□□□ -0.04
USB1-207ENST00000563149 ITPK1Q13572 414 aa14.8□□□□□ -0.04
USB1-207ENST00000563149 MSL3Q8N5Y2 521 aaKnown RBP14.8□□□□□ -0.04
USB1-207ENST00000563149 HNRNPLLQ8WVV9 542 aaKnown RBP14.8□□□□□ -0.04
USB1-207ENST00000563149 NSUN4Q96CB9 384 aaKnown RBP14.8□□□□□ -0.04
USB1-207ENST00000563149 MINPP1Q9UNW1 487 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms