RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 KLRC3Q07444 240 aa19.26■□□□□ 0.67
USB1-206ENST00000562534 STOX1Q6ZVD7 989 aa19.26■□□□□ 0.67
USB1-206ENST00000562534 ANKS1AQ92625 1134 aa19.26■□□□□ 0.67
USB1-206ENST00000562534 NEK1Q96PY6 1258 aa19.26■□□□□ 0.67
USB1-206ENST00000562534 UBAC1Q9BSL1 405 aa19.26■□□□□ 0.67
USB1-206ENST00000562534 MTA3Q9BTC8 594 aa19.26■□□□□ 0.67
USB1-206ENST00000562534 CFHR5Q9BXR6 569 aa19.26■□□□□ 0.67
USB1-206ENST00000562534 ZFYVE28Q9HCC9 887 aa19.26■□□□□ 0.67
USB1-206ENST00000562534 PNMA3Q9UL41 463 aa19.26■□□□□ 0.67
USB1-206ENST00000562534 TAF6LQ9Y6J9 622 aa19.26■□□□□ 0.67
USB1-206ENST00000562534 ERICH2A1L162 156 aa19.25■□□□□ 0.67
USB1-206ENST00000562534 USP17L15C9J2P7 530 aa19.25■□□□□ 0.67
USB1-206ENST00000562534 USP17L13C9JLJ4 530 aa19.25■□□□□ 0.67
USB1-206ENST00000562534 USP17L11C9JVI0 530 aa19.25■□□□□ 0.67
USB1-206ENST00000562534 USP17L18D6R9N7 530 aa19.25■□□□□ 0.67
USB1-206ENST00000562534 USP17L22D6RA61 530 aa19.25■□□□□ 0.67
USB1-206ENST00000562534 USP17L17D6RBQ6 530 aa19.25■□□□□ 0.67
USB1-206ENST00000562534 USP17L19D6RCP7 530 aa19.25■□□□□ 0.67
USB1-206ENST00000562534 USP17L20D6RJB6 530 aa19.25■□□□□ 0.67
USB1-206ENST00000562534 HMGB1P09429 215 aaKnown RBP19.25■□□□□ 0.67
USB1-206ENST00000562534 TOP1P11387 765 aaKnown RBP19.25■□□□□ 0.67
USB1-206ENST00000562534 MCM5P33992 734 aa19.25■□□□□ 0.67
USB1-206ENST00000562534 USP17L24Q0WX57 530 aa19.25■□□□□ 0.67
USB1-206ENST00000562534 SART3Q15020 963 aaKnown RBP19.25■□□□□ 0.67
USB1-206ENST00000562534 C8orf34Q49A92 452 aa19.25■□□□□ 0.67
USB1-206ENST00000562534 RASEFQ8IZ41 740 aa19.25■□□□□ 0.67
USB1-206ENST00000562534 ZKSCAN3Q9BRR0 538 aa19.25■□□□□ 0.67
USB1-206ENST00000562534 TAF1CQ15572 869 aaPredicted RBP19.24■□□□□ 0.67
USB1-206ENST00000562534 TREML2Q5T2D2 321 aa19.24■□□□□ 0.67
USB1-206ENST00000562534 CYB5R4Q7L1T6 521 aa19.24■□□□□ 0.67
USB1-206ENST00000562534 GMCL1P1Q8NEA9 526 aa19.24■□□□□ 0.67
USB1-206ENST00000562534 NKX2-3Q8TAU0 364 aa19.24■□□□□ 0.67
USB1-206ENST00000562534 LAMA4Q16363 1823 aa19.23■□□□□ 0.67
USB1-206ENST00000562534 THSD7BQ9C0I4 1608 aa19.23■□□□□ 0.67
USB1-206ENST00000562534 WDR46O15213 610 aaKnown RBP19.23■□□□□ 0.67
USB1-206ENST00000562534 RAD21O60216 631 aa19.23■□□□□ 0.67
USB1-206ENST00000562534 VCAM1P19320 739 aa19.23■□□□□ 0.67
USB1-206ENST00000562534 PSMA5P28066 241 aa19.23■□□□□ 0.67
USB1-206ENST00000562534 DGKZQ13574 1117 aa19.23■□□□□ 0.67
USB1-206ENST00000562534 RCSD1Q6JBY9 416 aa19.23■□□□□ 0.67
USB1-206ENST00000562534 CATSPERGQ6ZRH7 1159 aa19.23■□□□□ 0.67
USB1-206ENST00000562534 MB21D2Q8IYB1 491 aaPredicted RBP19.23■□□□□ 0.67
USB1-206ENST00000562534 TMTC2Q8N394 836 aa19.23■□□□□ 0.67
USB1-206ENST00000562534 PARK7Q99497 189 aaKnown RBP19.23■□□□□ 0.67
USB1-206ENST00000562534 TMEM47Q9BQJ4 181 aa19.23■□□□□ 0.67
USB1-206ENST00000562534 SNX14Q9Y5W7 946 aa19.23■□□□□ 0.67
USB1-206ENST00000562534 IFIT3O14879 490 aaKnown RBP19.22■□□□□ 0.67
USB1-206ENST00000562534 SEC24BO95487 1268 aa19.22■□□□□ 0.67
USB1-206ENST00000562534 IRX3P78415 501 aaPredicted RBP19.22■□□□□ 0.67
USB1-206ENST00000562534 SLFN13Q68D06 897 aa19.22■□□□□ 0.67
USB1-206ENST00000562534 DHX32Q7L7V1 743 aaKnown RBP19.22■□□□□ 0.67
USB1-206ENST00000562534 SPICE1Q8N0Z3 855 aa19.22■□□□□ 0.67
USB1-206ENST00000562534 TMEM87BQ96K49 555 aa19.22■□□□□ 0.67
USB1-206ENST00000562534 RPAP3Q9H6T3 665 aaPredicted RBP19.22■□□□□ 0.67
USB1-206ENST00000562534 HOXC10Q9NYD6 342 aa19.22■□□□□ 0.67
USB1-206ENST00000562534 TNKSO95271 1327 aa19.22■□□□□ 0.67
USB1-206ENST00000562534 GREB1LQ9C091 1923 aaPredicted RBP19.21■□□□□ 0.67
USB1-206ENST00000562534 TLR2O60603 784 aa19.21■□□□□ 0.67
USB1-206ENST00000562534 TBC1D8O95759 1140 aa19.21■□□□□ 0.67
USB1-206ENST00000562534 HSPA1AP0DMV8 641 aaKnown RBP19.21■□□□□ 0.67
USB1-206ENST00000562534 HSPA1BP0DMV9 641 aaKnown RBP19.21■□□□□ 0.67
USB1-206ENST00000562534 CRHR2Q13324 411 aa19.21■□□□□ 0.67
USB1-206ENST00000562534 COG2Q14746 738 aa19.21■□□□□ 0.67
USB1-206ENST00000562534 KIAA1755Q5JYT7 1200 aa19.21■□□□□ 0.67
USB1-206ENST00000562534 IFIT1BQ5T764 474 aaKnown RBP19.21■□□□□ 0.67
USB1-206ENST00000562534 LRRC47Q8N1G4 583 aaKnown RBP19.21■□□□□ 0.67
USB1-206ENST00000562534 ENAHQ8N8S7 591 aaPredicted RBP19.21■□□□□ 0.67
USB1-206ENST00000562534 IGDCC4Q8TDY8 1250 aa19.21■□□□□ 0.67
USB1-206ENST00000562534 ASCC2Q9H1I8 757 aaPredicted RBP19.21■□□□□ 0.67
USB1-206ENST00000562534 KAT14Q9H8E8 782 aa19.21■□□□□ 0.67
USB1-206ENST00000562534 PRC1O43663 620 aa19.2■□□□□ 0.66
USB1-206ENST00000562534 NDUFB10O96000 172 aa19.2■□□□□ 0.66
USB1-206ENST00000562534 SEC23AQ15436 765 aa19.2■□□□□ 0.66
USB1-206ENST00000562534 ADCK5Q3MIX3 580 aa19.2■□□□□ 0.66
USB1-206ENST00000562534 NOM1Q5C9Z4 860 aaKnown RBP19.2■□□□□ 0.66
USB1-206ENST00000562534 TMEM67Q5HYA8 995 aa19.2■□□□□ 0.66
USB1-206ENST00000562534 CHST3Q7LGC8 479 aa19.2■□□□□ 0.66
USB1-206ENST00000562534 SMCR8Q8TEV9 937 aaPredicted RBP19.2■□□□□ 0.66
USB1-206ENST00000562534 GMCL1Q96IK5 515 aa19.2■□□□□ 0.66
USB1-206ENST00000562534 P2RX7Q99572 595 aaKnown RBP19.2■□□□□ 0.66
USB1-206ENST00000562534 WDR19Q8NEZ3 1342 aa19.2■□□□□ 0.66
USB1-206ENST00000562534 CYP2C8P10632 490 aa19.19■□□□□ 0.66
USB1-206ENST00000562534 SLC1A4P43007 532 aa19.19■□□□□ 0.66
USB1-206ENST00000562534 GCLCP48506 637 aaPredicted RBP19.19■□□□□ 0.66
USB1-206ENST00000562534 CTCFP49711 727 aaPredicted RBP19.19■□□□□ 0.66
USB1-206ENST00000562534 ANTXR2P58335 489 aa19.19■□□□□ 0.66
USB1-206ENST00000562534 ANAPC15P60006 121 aa19.19■□□□□ 0.66
USB1-206ENST00000562534 EXOSC10Q01780 885 aaKnown RBP19.19■□□□□ 0.66
USB1-206ENST00000562534 WTAPQ15007 396 aa19.19■□□□□ 0.66
USB1-206ENST00000562534 GTF3C2Q8WUA4 911 aaPredicted RBP19.19■□□□□ 0.66
USB1-206ENST00000562534 JAKMIP1Q96N16 626 aaKnown RBP19.19■□□□□ 0.66
USB1-206ENST00000562534 TM6SF1Q9BZW5 370 aa19.19■□□□□ 0.66
USB1-206ENST00000562534 TANGO6Q9C0B7 1094 aa19.19■□□□□ 0.66
USB1-206ENST00000562534 CEP350Q5VT06 3117 aa19.18■□□□□ 0.66
USB1-206ENST00000562534 PTPRFP10586 1907 aa19.18■□□□□ 0.66
USB1-206ENST00000562534 BMP3P12645 472 aa19.18■□□□□ 0.66
USB1-206ENST00000562534 BLOC1S2Q6QNY1 142 aa19.18■□□□□ 0.66
USB1-206ENST00000562534 PNMA1Q8ND90 353 aa19.18■□□□□ 0.66
USB1-206ENST00000562534 CHURC1Q8WUH1 139 aa19.18■□□□□ 0.66
USB1-206ENST00000562534 DCAF4Q8WV16 495 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms