RNA–Protein interactions for RNA: ENST00000562477.1

TMEM249-202, Transcript of transmembrane protein 249, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TMEM249, Length 725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM249-202ENST00000562477 Q3C1V9 767 aa23.03■■□□□ 1.28
TMEM249-202ENST00000562477 FAM47AQ5JRC9 791 aa23.03■■□□□ 1.28
TMEM249-202ENST00000562477 CWC27Q6UX04 472 aaKnown RBP23.03■■□□□ 1.28
TMEM249-202ENST00000562477 VCPKMTQ9H867 229 aa23.03■■□□□ 1.28
TMEM249-202ENST00000562477 DIAPH3Q9NSV4 1193 aa23.03■■□□□ 1.28
TMEM249-202ENST00000562477 GREB1LQ9C091 1923 aaPredicted RBP23.03■■□□□ 1.28
TMEM249-202ENST00000562477 IGKV6D-41A0A0C4DH26 115 aa23.02■■□□□ 1.28
TMEM249-202ENST00000562477 MYCP01106 439 aaPredicted RBP23.02■■□□□ 1.28
TMEM249-202ENST00000562477 FGAP02671 866 aa23.02■■□□□ 1.28
TMEM249-202ENST00000562477 ZNF444Q8N0Y2 327 aaPredicted RBP23.02■■□□□ 1.28
TMEM249-202ENST00000562477 RAET1EQ8TD07 263 aa23.02■■□□□ 1.28
TMEM249-202ENST00000562477 ZNF333Q96JL9 665 aa23.02■■□□□ 1.28
TMEM249-202ENST00000562477 TANGO6Q9C0B7 1094 aa23.02■■□□□ 1.28
TMEM249-202ENST00000562477 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.02■■□□□ 1.28
TMEM249-202ENST00000562477 BRCA2P51587 3418 aa23.02■■□□□ 1.28
TMEM249-202ENST00000562477 SPDYE16A6NNV3 312 aaPredicted RBP23.01■■□□□ 1.27
TMEM249-202ENST00000562477 FLT3LGP49771 235 aa23.01■■□□□ 1.27
TMEM249-202ENST00000562477 ERVK-9P63128 1117 aa23.01■■□□□ 1.27
TMEM249-202ENST00000562477 ERVK-24P63145 666 aa23.01■■□□□ 1.27
TMEM249-202ENST00000562477 SKAP1Q86WV1 359 aa23.01■■□□□ 1.27
TMEM249-202ENST00000562477 GPRC5AQ8NFJ5 357 aa23.01■■□□□ 1.27
TMEM249-202ENST00000562477 SH2D4AQ9H788 454 aa23.01■■□□□ 1.27
TMEM249-202ENST00000562477 SLC3A2P08195 630 aaKnown RBP23■■□□□ 1.27
TMEM249-202ENST00000562477 PDE4BQ07343 736 aa23■■□□□ 1.27
TMEM249-202ENST00000562477 PORCNQ9H237 461 aa23■■□□□ 1.27
TMEM249-202ENST00000562477 IL25Q9H293 177 aa23■■□□□ 1.27
TMEM249-202ENST00000562477 ZNF287Q9HBT7 754 aa23■■□□□ 1.27
TMEM249-202ENST00000562477 BTBD7Q9P203 1132 aa23■■□□□ 1.27
TMEM249-202ENST00000562477 POTEFA5A3E0 1075 aa22.99■■□□□ 1.27
TMEM249-202ENST00000562477 RAD21O60216 631 aa22.99■■□□□ 1.27
TMEM249-202ENST00000562477 RGS19P49795 217 aa22.99■■□□□ 1.27
TMEM249-202ENST00000562477 HAND2P61296 217 aa22.99■■□□□ 1.27
TMEM249-202ENST00000562477 TFAP4Q01664 338 aa22.99■■□□□ 1.27
TMEM249-202ENST00000562477 GTF3C2Q8WUA4 911 aaPredicted RBP22.99■■□□□ 1.27
TMEM249-202ENST00000562477 LPAR1Q92633 364 aa22.99■■□□□ 1.27
TMEM249-202ENST00000562477 COA7Q96BR5 231 aa22.99■■□□□ 1.27
TMEM249-202ENST00000562477 CEP95Q96GE4 821 aa22.99■■□□□ 1.27
TMEM249-202ENST00000562477 NYAP2Q9P242 653 aa22.99■■□□□ 1.27
TMEM249-202ENST00000562477 CLIP2Q9UDT6 1046 aa22.99■■□□□ 1.27
TMEM249-202ENST00000562477 ANAPC4Q9UJX5 808 aa22.99■■□□□ 1.27
TMEM249-202ENST00000562477 GRK4P32298 578 aa22.98■■□□□ 1.27
TMEM249-202ENST00000562477 SAMD1Q6SPF0 538 aaPredicted RBP22.98■■□□□ 1.27
TMEM249-202ENST00000562477 NEDD1Q8NHV4 660 aa22.98■■□□□ 1.27
TMEM249-202ENST00000562477 MTMR4Q9NYA4 1195 aa22.98■■□□□ 1.27
TMEM249-202ENST00000562477 RABGAP1Q9Y3P9 1069 aa22.98■■□□□ 1.27
TMEM249-202ENST00000562477 PLIN4Q96Q06 1357 aa22.98■■□□□ 1.27
TMEM249-202ENST00000562477 HIP1O00291 1037 aa22.97■■□□□ 1.27
TMEM249-202ENST00000562477 TSPY3P0CV98 308 aa22.97■■□□□ 1.27
TMEM249-202ENST00000562477 TSPY8P0CW00 308 aa22.97■■□□□ 1.27
TMEM249-202ENST00000562477 ELNP15502 786 aa22.97■■□□□ 1.27
TMEM249-202ENST00000562477 LBX2Q6XYB7 198 aa22.97■■□□□ 1.27
TMEM249-202ENST00000562477 NBPF11Q86T75 865 aa22.97■■□□□ 1.27
TMEM249-202ENST00000562477 NUP88Q99567 741 aaPredicted RBP22.97■■□□□ 1.27
TMEM249-202ENST00000562477 NBPF3Q9H094 633 aa22.97■■□□□ 1.27
TMEM249-202ENST00000562477 GOPCQ9HD26 462 aa22.97■■□□□ 1.27
TMEM249-202ENST00000562477 FBXO28Q9NVF7 368 aa22.97■■□□□ 1.27
TMEM249-202ENST00000562477 GJD2Q9UKL4 321 aa22.97■■□□□ 1.27
TMEM249-202ENST00000562477 WDR46O15213 610 aaKnown RBP22.96■■□□□ 1.27
TMEM249-202ENST00000562477 ADCY3O60266 1144 aa22.96■■□□□ 1.27
TMEM249-202ENST00000562477 FLOT1O75955 427 aa22.96■■□□□ 1.27
TMEM249-202ENST00000562477 COG2Q14746 738 aa22.96■■□□□ 1.27
TMEM249-202ENST00000562477 MTFR1Q15390 333 aa22.96■■□□□ 1.27
TMEM249-202ENST00000562477 FAM83BQ5T0W9 1011 aa22.96■■□□□ 1.27
TMEM249-202ENST00000562477 LRRC47Q8N1G4 583 aaKnown RBP22.96■■□□□ 1.27
TMEM249-202ENST00000562477 ATG4CQ96DT6 458 aa22.96■■□□□ 1.27
TMEM249-202ENST00000562477 ZMYM6O95789 1325 aa22.96■■□□□ 1.27
TMEM249-202ENST00000562477 RLFQ13129 1914 aa22.96■■□□□ 1.27
TMEM249-202ENST00000562477 NMT2O60551 498 aa22.95■■□□□ 1.26
TMEM249-202ENST00000562477 NDUFB10O96000 172 aa22.95■■□□□ 1.26
TMEM249-202ENST00000562477 DSG3P32926 999 aa22.95■■□□□ 1.26
TMEM249-202ENST00000562477 MFAP1P55081 439 aaKnown RBP22.95■■□□□ 1.26
TMEM249-202ENST00000562477 TBC1D10CQ8IV04 446 aa22.95■■□□□ 1.26
TMEM249-202ENST00000562477 NKX2-3Q8TAU0 364 aa22.95■■□□□ 1.26
TMEM249-202ENST00000562477 ORC4O43929 436 aa22.94■■□□□ 1.26
TMEM249-202ENST00000562477 RANBP6O60518 1105 aaKnown RBP22.94■■□□□ 1.26
TMEM249-202ENST00000562477 TTLL1O95922 423 aa22.94■■□□□ 1.26
TMEM249-202ENST00000562477 MAPK4P31152 587 aa22.94■■□□□ 1.26
TMEM249-202ENST00000562477 IRF5Q13568 498 aa22.94■■□□□ 1.26
TMEM249-202ENST00000562477 CENPQQ7L2Z9 268 aaPredicted RBP22.94■■□□□ 1.26
TMEM249-202ENST00000562477 TOMM22Q9NS69 142 aa22.94■■□□□ 1.26
TMEM249-202ENST00000562477 HOXC10Q9NYD6 342 aa22.94■■□□□ 1.26
TMEM249-202ENST00000562477 BIN2Q9UBW5 565 aaPredicted RBP22.94■■□□□ 1.26
TMEM249-202ENST00000562477 MKI67P46013 3256 aaKnown RBP22.94■■□□□ 1.26
TMEM249-202ENST00000562477 TSPY2A6NKD2 308 aa22.93■■□□□ 1.26
TMEM249-202ENST00000562477 F5H6K3 240 aa22.93■■□□□ 1.26
TMEM249-202ENST00000562477 FGRP09769 529 aa22.93■■□□□ 1.26
TMEM249-202ENST00000562477 KLRC3Q07444 240 aa22.93■■□□□ 1.26
TMEM249-202ENST00000562477 RRP12Q5JTH9 1297 aaKnown RBP22.93■■□□□ 1.26
TMEM249-202ENST00000562477 GPR142Q7Z601 462 aa22.93■■□□□ 1.26
TMEM249-202ENST00000562477 SLAIN1Q8ND83 568 aa22.93■■□□□ 1.26
TMEM249-202ENST00000562477 MKL1Q969V6 931 aa22.93■■□□□ 1.26
TMEM249-202ENST00000562477 IL17RBQ9NRM6 502 aa22.93■■□□□ 1.26
TMEM249-202ENST00000562477 EN2P19622 333 aaPredicted RBP22.92■■□□□ 1.26
TMEM249-202ENST00000562477 CHMLP26374 656 aa22.92■■□□□ 1.26
TMEM249-202ENST00000562477 WDR78Q5VTH9 848 aa22.92■■□□□ 1.26
TMEM249-202ENST00000562477 PLEKHH3Q7Z736 793 aa22.92■■□□□ 1.26
TMEM249-202ENST00000562477 CCAR1Q8IX12 1150 aaKnown RBP22.92■■□□□ 1.26
TMEM249-202ENST00000562477 CHMP4CQ96CF2 233 aa22.92■■□□□ 1.26
TMEM249-202ENST00000562477 PLXNB2O15031 1838 aa22.92■■□□□ 1.26
TMEM249-202ENST00000562477 MYH4Q9Y623 1939 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms