RNA–Protein interactions for RNA: ENST00000562373.1

NR4A1-219, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 3

Gene NR4A1, Length 838 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-219ENST00000562373 ERVK-9P63128 1117 aa25.14■■□□□ 1.62
NR4A1-219ENST00000562373 ERVK-24P63145 666 aa25.14■■□□□ 1.62
NR4A1-219ENST00000562373 CTDSPL2Q05D32 466 aa25.14■■□□□ 1.62
NR4A1-219ENST00000562373 PPARAQ07869 468 aa25.14■■□□□ 1.62
NR4A1-219ENST00000562373 ZNF444Q8N0Y2 327 aaPredicted RBP25.14■■□□□ 1.62
NR4A1-219ENST00000562373 PORCNQ9H237 461 aa25.14■■□□□ 1.62
NR4A1-219ENST00000562373 KANSL2Q9H9L4 492 aa25.14■■□□□ 1.62
NR4A1-219ENST00000562373 ROBO3Q96MS0 1386 aa25.14■■□□□ 1.61
NR4A1-219ENST00000562373 RAD21O60216 631 aa25.13■■□□□ 1.61
NR4A1-219ENST00000562373 ADCY3O60266 1144 aa25.13■■□□□ 1.61
NR4A1-219ENST00000562373 SDSP20132 328 aa25.13■■□□□ 1.61
NR4A1-219ENST00000562373 MCMDC2Q4G0Z9 681 aa25.13■■□□□ 1.61
NR4A1-219ENST00000562373 SAMD1Q6SPF0 538 aaPredicted RBP25.13■■□□□ 1.61
NR4A1-219ENST00000562373 ZNF589Q86UQ0 364 aaPredicted RBP25.13■■□□□ 1.61
NR4A1-219ENST00000562373 TMEM106CQ9BVX2 250 aa25.13■■□□□ 1.61
NR4A1-219ENST00000562373 TANGO6Q9C0B7 1094 aa25.13■■□□□ 1.61
NR4A1-219ENST00000562373 VCPKMTQ9H867 229 aa25.13■■□□□ 1.61
NR4A1-219ENST00000562373 BTBD7Q9P203 1132 aa25.13■■□□□ 1.61
NR4A1-219ENST00000562373 CENPFP49454 3210 aa25.12■■□□□ 1.61
NR4A1-219ENST00000562373 FAM47AQ5JRC9 791 aa25.12■■□□□ 1.61
NR4A1-219ENST00000562373 GJD2Q9UKL4 321 aa25.12■■□□□ 1.61
NR4A1-219ENST00000562373 TACC3Q9Y6A5 838 aa25.12■■□□□ 1.61
NR4A1-219ENST00000562373 SPDYE16A6NNV3 312 aaPredicted RBP25.11■■□□□ 1.61
NR4A1-219ENST00000562373 KIAA0100Q14667 2235 aaKnown RBP25.1■■□□□ 1.61
NR4A1-219ENST00000562373 COG2Q14746 738 aa25.1■■□□□ 1.61
NR4A1-219ENST00000562373 SH2D4AQ9H788 454 aa25.1■■□□□ 1.61
NR4A1-219ENST00000562373 RABGAP1Q9Y3P9 1069 aa25.1■■□□□ 1.61
NR4A1-219ENST00000562373 CCAR1Q8IX12 1150 aaKnown RBP25.09■■□□□ 1.61
NR4A1-219ENST00000562373 SLAIN1Q8ND83 568 aa25.09■■□□□ 1.61
NR4A1-219ENST00000562373 GTF3C2Q8WUA4 911 aaPredicted RBP25.09■■□□□ 1.61
NR4A1-219ENST00000562373 CLIP2Q9UDT6 1046 aa25.09■■□□□ 1.61
NR4A1-219ENST00000562373 FGAP02671 866 aa25.08■■□□□ 1.61
NR4A1-219ENST00000562373 HSPD1P10809 573 aaKnown RBP25.08■■□□□ 1.61
NR4A1-219ENST00000562373 CYP2B6P20813 491 aa25.08■■□□□ 1.61
NR4A1-219ENST00000562373 TFAP4Q01664 338 aa25.08■■□□□ 1.61
NR4A1-219ENST00000562373 IRF5Q13568 498 aa25.08■■□□□ 1.61
NR4A1-219ENST00000562373 LPAR1Q92633 364 aa25.08■■□□□ 1.61
NR4A1-219ENST00000562373 IGKV6D-41A0A0C4DH26 115 aa25.07■■□□□ 1.6
NR4A1-219ENST00000562373 FLOT1O75955 427 aa25.07■■□□□ 1.6
NR4A1-219ENST00000562373 SLC3A2P08195 630 aaKnown RBP25.07■■□□□ 1.6
NR4A1-219ENST00000562373 CCL5P13501 91 aa25.07■■□□□ 1.6
NR4A1-219ENST00000562373 PDE4BQ07343 736 aa25.07■■□□□ 1.6
NR4A1-219ENST00000562373 WDR78Q5VTH9 848 aa25.07■■□□□ 1.6
NR4A1-219ENST00000562373 CWC27Q6UX04 472 aaKnown RBP25.07■■□□□ 1.6
NR4A1-219ENST00000562373 GPR142Q7Z601 462 aa25.07■■□□□ 1.6
NR4A1-219ENST00000562373 ATG4CQ96DT6 458 aa25.07■■□□□ 1.6
NR4A1-219ENST00000562373 CEP95Q96GE4 821 aa25.07■■□□□ 1.6
NR4A1-219ENST00000562373 NUP88Q99567 741 aaPredicted RBP25.07■■□□□ 1.6
NR4A1-219ENST00000562373 ZNF287Q9HBT7 754 aa25.07■■□□□ 1.6
NR4A1-219ENST00000562373 FBXO28Q9NVF7 368 aa25.07■■□□□ 1.6
NR4A1-219ENST00000562373 HOXC10Q9NYD6 342 aa25.07■■□□□ 1.6
NR4A1-219ENST00000562373 NYAP2Q9P242 653 aa25.07■■□□□ 1.6
NR4A1-219ENST00000562373 GREB1LQ9C091 1923 aaPredicted RBP25.07■■□□□ 1.6
NR4A1-219ENST00000562373 INHAP05111 366 aa25.06■■□□□ 1.6
NR4A1-219ENST00000562373 MAPK4P31152 587 aa25.06■■□□□ 1.6
NR4A1-219ENST00000562373 DSG3P32926 999 aa25.06■■□□□ 1.6
NR4A1-219ENST00000562373 ALX1Q15699 326 aa25.06■■□□□ 1.6
NR4A1-219ENST00000562373 FAM83BQ5T0W9 1011 aa25.06■■□□□ 1.6
NR4A1-219ENST00000562373 LBX2Q6XYB7 198 aa25.06■■□□□ 1.6
NR4A1-219ENST00000562373 PLEKHH3Q7Z736 793 aa25.06■■□□□ 1.6
NR4A1-219ENST00000562373 UNC93B1Q9H1C4 597 aa25.06■■□□□ 1.6
NR4A1-219ENST00000562373 GOPCQ9HD26 462 aa25.06■■□□□ 1.6
NR4A1-219ENST00000562373 PLXNB2O15031 1838 aa25.06■■□□□ 1.6
NR4A1-219ENST00000562373 CCDC171Q6TFL3 1326 aa25.06■■□□□ 1.6
NR4A1-219ENST00000562373 WDR46O15213 610 aaKnown RBP25.05■■□□□ 1.6
NR4A1-219ENST00000562373 TSPY3P0CV98 308 aa25.05■■□□□ 1.6
NR4A1-219ENST00000562373 TSPY8P0CW00 308 aa25.05■■□□□ 1.6
NR4A1-219ENST00000562373 GSPT1P15170 499 aaKnown RBP25.05■■□□□ 1.6
NR4A1-219ENST00000562373 UBXN2AP68543 259 aa25.05■■□□□ 1.6
NR4A1-219ENST00000562373 TRIM32Q13049 653 aa25.05■■□□□ 1.6
NR4A1-219ENST00000562373 NEDD1Q8NHV4 660 aa25.05■■□□□ 1.6
NR4A1-219ENST00000562373 PXYLP1Q8TE99 480 aa25.05■■□□□ 1.6
NR4A1-219ENST00000562373 CHMP4CQ96CF2 233 aa25.05■■□□□ 1.6
NR4A1-219ENST00000562373 RNF208Q9H0X6 261 aa25.05■■□□□ 1.6
NR4A1-219ENST00000562373 CWC22Q9HCG8 908 aaKnown RBP25.05■■□□□ 1.6
NR4A1-219ENST00000562373 MTMR4Q9NYA4 1195 aa25.05■■□□□ 1.6
NR4A1-219ENST00000562373 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.05■■□□□ 1.6
NR4A1-219ENST00000562373 RLFQ13129 1914 aa25.05■■□□□ 1.6
NR4A1-219ENST00000562373 HAND2P61296 217 aa25.04■■□□□ 1.6
NR4A1-219ENST00000562373 TICAM2Q86XR7 235 aa25.04■■□□□ 1.6
NR4A1-219ENST00000562373 NUDT12Q9BQG2 462 aa25.04■■□□□ 1.6
NR4A1-219ENST00000562373 DIAPH3Q9NSV4 1193 aa25.04■■□□□ 1.6
NR4A1-219ENST00000562373 F5H6K3 240 aa25.03■■□□□ 1.6
NR4A1-219ENST00000562373 CCNA1P78396 465 aa25.03■■□□□ 1.6
NR4A1-219ENST00000562373 KLRC3Q07444 240 aa25.03■■□□□ 1.6
NR4A1-219ENST00000562373 TTC22Q5TAA0 569 aa25.03■■□□□ 1.6
NR4A1-219ENST00000562373 LRRC47Q8N1G4 583 aaKnown RBP25.03■■□□□ 1.6
NR4A1-219ENST00000562373 MOV10L1Q9BXT6 1211 aaKnown RBP25.03■■□□□ 1.6
NR4A1-219ENST00000562373 ANAPC4Q9UJX5 808 aa25.03■■□□□ 1.6
NR4A1-219ENST00000562373 NMT2O60551 498 aa25.02■■□□□ 1.6
NR4A1-219ENST00000562373 NDUFB10O96000 172 aa25.02■■□□□ 1.6
NR4A1-219ENST00000562373 PLS1Q14651 629 aa25.02■■□□□ 1.6
NR4A1-219ENST00000562373 MORN1Q5T089 497 aa25.02■■□□□ 1.6
NR4A1-219ENST00000562373 TOMM22Q9NS69 142 aa25.02■■□□□ 1.6
NR4A1-219ENST00000562373 RANBP6O60518 1105 aaKnown RBP25.01■■□□□ 1.59
NR4A1-219ENST00000562373 CCL14Q16627 93 aa25.01■■□□□ 1.59
NR4A1-219ENST00000562373 RRP12Q5JTH9 1297 aaKnown RBP25.01■■□□□ 1.59
NR4A1-219ENST00000562373 TRIB2Q92519 343 aa25.01■■□□□ 1.59
NR4A1-219ENST00000562373 USP6NLQ92738 828 aa25.01■■□□□ 1.59
NR4A1-219ENST00000562373 MKL1Q969V6 931 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 155.3 ms