RNA–Protein interactions for RNA: ENST00000562047.1

EDC3-203, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 4

Gene EDC3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-203ENST00000562047 FLT3LGP49771 235 aa13.32□□□□□ -0.28
EDC3-203ENST00000562047 ERVK-9P63128 1117 aa13.32□□□□□ -0.28
EDC3-203ENST00000562047 ERVK-24P63145 666 aa13.32□□□□□ -0.28
EDC3-203ENST00000562047 COG2Q14746 738 aa13.32□□□□□ -0.28
EDC3-203ENST00000562047 MCMDC2Q4G0Z9 681 aa13.32□□□□□ -0.28
EDC3-203ENST00000562047 PPP4R3BQ5MIZ7 849 aa13.32□□□□□ -0.28
EDC3-203ENST00000562047 PLEKHM2Q8IWE5 1019 aa13.32□□□□□ -0.28
EDC3-203ENST00000562047 MB21D1Q8N884 522 aa13.32□□□□□ -0.28
EDC3-203ENST00000562047 SH3TC2Q8TF17 1288 aa13.32□□□□□ -0.28
EDC3-203ENST00000562047 SOCS4Q8WXH5 440 aa13.32□□□□□ -0.28
EDC3-203ENST00000562047 RILPL2Q969X0 211 aa13.32□□□□□ -0.28
EDC3-203ENST00000562047 SEC62Q99442 399 aaKnown RBP13.32□□□□□ -0.28
EDC3-203ENST00000562047 VCPKMTQ9H867 229 aa13.32□□□□□ -0.28
EDC3-203ENST00000562047 CWC22Q9HCG8 908 aaKnown RBP13.32□□□□□ -0.28
EDC3-203ENST00000562047 EPB41L4AQ9HCS5 686 aaPredicted RBP13.32□□□□□ -0.28
EDC3-203ENST00000562047 RBPJLQ9UBG7 517 aa13.32□□□□□ -0.28
EDC3-203ENST00000562047 MYH8P13535 1937 aa13.32□□□□□ -0.28
EDC3-203ENST00000562047 ADCY3O60266 1144 aa13.31□□□□□ -0.28
EDC3-203ENST00000562047 EEF2P13639 858 aaKnown RBP13.31□□□□□ -0.28
EDC3-203ENST00000562047 RASA1P20936 1047 aa13.31□□□□□ -0.28
EDC3-203ENST00000562047 ATP2B2Q01814 1243 aa13.31□□□□□ -0.28
EDC3-203ENST00000562047 TRMT44Q8IYL2 757 aaKnown RBP13.31□□□□□ -0.28
EDC3-203ENST00000562047 NKX2-3Q8TAU0 364 aa13.31□□□□□ -0.28
EDC3-203ENST00000562047 PAGR1Q9BTK6 254 aa13.31□□□□□ -0.28
EDC3-203ENST00000562047 TANGO6Q9C0B7 1094 aa13.31□□□□□ -0.28
EDC3-203ENST00000562047 SYNPO2Q9UMS6 1093 aa13.31□□□□□ -0.28
EDC3-203ENST00000562047 MGAMO43451 1857 aa13.3□□□□□ -0.28
EDC3-203ENST00000562047 WDR46O15213 610 aaKnown RBP13.3□□□□□ -0.28
EDC3-203ENST00000562047 PPARAQ07869 468 aa13.3□□□□□ -0.28
EDC3-203ENST00000562047 ALX1Q15699 326 aa13.3□□□□□ -0.28
EDC3-203ENST00000562047 SIAH1Q8IUQ4 282 aa13.3□□□□□ -0.28
EDC3-203ENST00000562047 NUDT12Q9BQG2 462 aa13.3□□□□□ -0.28
EDC3-203ENST00000562047 NYAP2Q9P242 653 aa13.3□□□□□ -0.28
EDC3-203ENST00000562047 GABRQQ9UN88 632 aa13.3□□□□□ -0.28
EDC3-203ENST00000562047 TSPY3P0CV98 308 aa13.29□□□□□ -0.28
EDC3-203ENST00000562047 TSPY8P0CW00 308 aa13.29□□□□□ -0.28
EDC3-203ENST00000562047 XRCC5P13010 732 aaKnown RBP13.29□□□□□ -0.28
EDC3-203ENST00000562047 PLEKHH3Q7Z736 793 aa13.29□□□□□ -0.28
EDC3-203ENST00000562047 TXNRD2Q9NNW7 524 aa13.29□□□□□ -0.28
EDC3-203ENST00000562047 ANAPC4Q9UJX5 808 aa13.29□□□□□ -0.28
EDC3-203ENST00000562047 IVNS1ABPQ9Y6Y0 642 aa13.29□□□□□ -0.28
EDC3-203ENST00000562047 POTEFA5A3E0 1075 aa13.28□□□□□ -0.28
EDC3-203ENST00000562047 SPDYE16A6NNV3 312 aaPredicted RBP13.28□□□□□ -0.28
EDC3-203ENST00000562047 SMIM22K7EJ46 135 aa13.28□□□□□ -0.28
EDC3-203ENST00000562047 FLOT1O75955 427 aa13.28□□□□□ -0.28
EDC3-203ENST00000562047 TTLL1O95922 423 aa13.28□□□□□ -0.28
EDC3-203ENST00000562047 SDSP20132 328 aa13.28□□□□□ -0.28
EDC3-203ENST00000562047 IRX6P78412 446 aaPredicted RBP13.28□□□□□ -0.28
EDC3-203ENST00000562047 SPICE1Q8N0Z3 855 aa13.28□□□□□ -0.28
EDC3-203ENST00000562047 STK11IPQ8N1F8 1099 aa13.28□□□□□ -0.28
EDC3-203ENST00000562047 FAM227BQ96M60 508 aa13.28□□□□□ -0.28
EDC3-203ENST00000562047 RNF208Q9H0X6 261 aa13.28□□□□□ -0.28
EDC3-203ENST00000562047 DIAPH3Q9NSV4 1193 aa13.28□□□□□ -0.28
EDC3-203ENST00000562047 GJD2Q9UKL4 321 aa13.28□□□□□ -0.28
EDC3-203ENST00000562047 PDE4DIPQ5VU43 2346 aa13.28□□□□□ -0.28
EDC3-203ENST00000562047 ZSWIM8A7E2V4 1837 aa13.27□□□□□ -0.28
EDC3-203ENST00000562047 A0A0D9SFI3 127 aa13.27□□□□□ -0.29
EDC3-203ENST00000562047 STRNO43815 780 aa13.27□□□□□ -0.29
EDC3-203ENST00000562047 RAD21O60216 631 aa13.27□□□□□ -0.29
EDC3-203ENST00000562047 PRDM1O75626 825 aa13.27□□□□□ -0.29
EDC3-203ENST00000562047 HMGCRP04035 888 aa13.27□□□□□ -0.29
EDC3-203ENST00000562047 INHAP05111 366 aa13.27□□□□□ -0.29
EDC3-203ENST00000562047 GJB1P08034 283 aa13.27□□□□□ -0.29
EDC3-203ENST00000562047 PCP11498 1178 aaKnown RBP13.27□□□□□ -0.29
EDC3-203ENST00000562047 CCL5P13501 91 aa13.27□□□□□ -0.29
EDC3-203ENST00000562047 DSG3P32926 999 aa13.27□□□□□ -0.29
EDC3-203ENST00000562047 RGS2P41220 211 aa13.27□□□□□ -0.29
EDC3-203ENST00000562047 NMIQ13287 307 aaPredicted RBP13.27□□□□□ -0.29
EDC3-203ENST00000562047 Q3C1V9 767 aa13.27□□□□□ -0.29
EDC3-203ENST00000562047 CCDC129Q6ZRS4 1044 aa13.27□□□□□ -0.29
EDC3-203ENST00000562047 GPR142Q7Z601 462 aa13.27□□□□□ -0.29
EDC3-203ENST00000562047 NEDD1Q8NHV4 660 aa13.27□□□□□ -0.29
EDC3-203ENST00000562047 MKL1Q969V6 931 aa13.27□□□□□ -0.29
EDC3-203ENST00000562047 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.27□□□□□ -0.29
EDC3-203ENST00000562047 MTMR4Q9NYA4 1195 aa13.27□□□□□ -0.29
EDC3-203ENST00000562047 CLIP2Q9UDT6 1046 aa13.27□□□□□ -0.29
EDC3-203ENST00000562047 ZMYM6O95789 1325 aa13.27□□□□□ -0.29
EDC3-203ENST00000562047 CCDC171Q6TFL3 1326 aa13.27□□□□□ -0.29
EDC3-203ENST00000562047 SLC15A5A6NIM6 579 aa13.26□□□□□ -0.29
EDC3-203ENST00000562047 TSPY2A6NKD2 308 aa13.26□□□□□ -0.29
EDC3-203ENST00000562047 F5H6K3 240 aa13.26□□□□□ -0.29
EDC3-203ENST00000562047 CNMDO75829 334 aa13.26□□□□□ -0.29
EDC3-203ENST00000562047 MYCP01106 439 aaPredicted RBP13.26□□□□□ -0.29
EDC3-203ENST00000562047 FGAP02671 866 aa13.26□□□□□ -0.29
EDC3-203ENST00000562047 HSPD1P10809 573 aaKnown RBP13.26□□□□□ -0.29
EDC3-203ENST00000562047 ELNP15502 786 aa13.26□□□□□ -0.29
EDC3-203ENST00000562047 EN2P19622 333 aaPredicted RBP13.26□□□□□ -0.29
EDC3-203ENST00000562047 NT5C2P49902 561 aa13.26□□□□□ -0.29
EDC3-203ENST00000562047 TFAP4Q01664 338 aa13.26□□□□□ -0.29
EDC3-203ENST00000562047 KLRC3Q07444 240 aa13.26□□□□□ -0.29
EDC3-203ENST00000562047 WDR78Q5VTH9 848 aa13.26□□□□□ -0.29
EDC3-203ENST00000562047 CLEC10AQ8IUN9 316 aa13.26□□□□□ -0.29
EDC3-203ENST00000562047 SHCBP1Q8NEM2 672 aa13.26□□□□□ -0.29
EDC3-203ENST00000562047 PLIN4Q96Q06 1357 aa13.26□□□□□ -0.29
EDC3-203ENST00000562047 SPATC1LQ9H0A9 340 aa13.26□□□□□ -0.29
EDC3-203ENST00000562047 PORCNQ9H237 461 aa13.26□□□□□ -0.29
EDC3-203ENST00000562047 DOCK3Q8IZD9 2030 aa13.25□□□□□ -0.29
EDC3-203ENST00000562047 RBBP6Q7Z6E9 1792 aaKnown RBP13.25□□□□□ -0.29
EDC3-203ENST00000562047 IGKV6D-41A0A0C4DH26 115 aa13.25□□□□□ -0.29
EDC3-203ENST00000562047 ORC4O43929 436 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms