RNA–Protein interactions for RNA: ENST00000561992.5

TCF4-211, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-211ENST00000561992 DEF6Q9H4E7 631 aa11.16□□□□□ -0.62
TCF4-211ENST00000561992 NLRP2Q9NX02 1062 aa11.16□□□□□ -0.62
TCF4-211ENST00000561992 HPCAL4Q9UM19 191 aa11.16□□□□□ -0.62
TCF4-211ENST00000561992 SETD1BQ9UPS6 1966 aaKnown RBP11.15□□□□□ -0.62
TCF4-211ENST00000561992 ALS2Q96Q42 1657 aa11.15□□□□□ -0.62
TCF4-211ENST00000561992 RIC1Q4ADV7 1423 aa11.15□□□□□ -0.62
TCF4-211ENST00000561992 ERICH2A1L162 156 aa11.15□□□□□ -0.62
TCF4-211ENST00000561992 N4BP3O15049 544 aa11.15□□□□□ -0.62
TCF4-211ENST00000561992 N4BP1O75113 896 aaKnown RBP11.15□□□□□ -0.62
TCF4-211ENST00000561992 SYF2O95926 243 aaKnown RBP11.15□□□□□ -0.62
TCF4-211ENST00000561992 ARID4AP29374 1257 aaPredicted RBP11.15□□□□□ -0.62
TCF4-211ENST00000561992 COPB1P53618 953 aaKnown RBP11.15□□□□□ -0.62
TCF4-211ENST00000561992 ERVK-24P63145 666 aa11.15□□□□□ -0.62
TCF4-211ENST00000561992 IFIT5Q13325 482 aaKnown RBP11.15□□□□□ -0.62
TCF4-211ENST00000561992 STIM1Q13586 685 aa11.15□□□□□ -0.62
TCF4-211ENST00000561992 SCARF1Q14162 830 aa11.15□□□□□ -0.62
TCF4-211ENST00000561992 PTPN21Q16825 1174 aa11.15□□□□□ -0.62
TCF4-211ENST00000561992 ZNF827Q17R98 1081 aa11.15□□□□□ -0.62
TCF4-211ENST00000561992 HSP90AA4PQ58FG1 418 aa11.15□□□□□ -0.62
TCF4-211ENST00000561992 AKNAD1Q5T1N1 836 aa11.15□□□□□ -0.62
TCF4-211ENST00000561992 SPATS2Q86XZ4 545 aaKnown RBP11.15□□□□□ -0.62
TCF4-211ENST00000561992 STAG1Q8WVM7 1258 aa11.15□□□□□ -0.62
TCF4-211ENST00000561992 SMARCC1Q92922 1105 aaPredicted RBP11.15□□□□□ -0.62
TCF4-211ENST00000561992 STRBPQ96SI9 672 aaKnown RBP11.15□□□□□ -0.62
TCF4-211ENST00000561992 RNF41Q9H4P4 317 aaPredicted RBP11.15□□□□□ -0.62
TCF4-211ENST00000561992 PCDHB6Q9Y5E3 794 aa11.15□□□□□ -0.62
TCF4-211ENST00000561992 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.15□□□□□ -0.62
TCF4-211ENST00000561992 SAR1BQ9Y6B6 198 aa11.15□□□□□ -0.62
TCF4-211ENST00000561992 EPN1Q9Y6I3 576 aaPredicted RBP11.15□□□□□ -0.62
TCF4-211ENST00000561992 MYO5AQ9Y4I1 1855 aaKnown RBP11.15□□□□□ -0.62
TCF4-211ENST00000561992 RTL9Q8NET4 1388 aa11.15□□□□□ -0.62
TCF4-211ENST00000561992 PAPPAQ13219 1627 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 ERVV-2B6SEH9 535 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 H7C1D1 291 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 NDUFA10O95299 355 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 APPP05067 770 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 ATP2B1P20020 1258 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 TCIRG1Q13488 830 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 KRT31Q15323 416 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 TSR1Q2NL82 804 aaKnown RBP11.14□□□□□ -0.63
TCF4-211ENST00000561992 TADA2BQ86TJ2 420 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 AMOTL1Q8IY63 956 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 OR8K1Q8NGG5 319 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 CEP89Q96ST8 783 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 CDC5LQ99459 802 aaKnown RBP11.14□□□□□ -0.63
TCF4-211ENST00000561992 CRACR2AQ9BSW2 395 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 TCRBV5S4A2TA0A5A2 114 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 CYP27B1O15528 508 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 CD44P16070 742 aaKnown RBP11.14□□□□□ -0.63
TCF4-211ENST00000561992 PDE6AP16499 860 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 MCAMP43121 646 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 GRIN1Q05586 938 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 WTAPQ15007 396 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 MMS22LQ6ZRQ5 1243 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 TTLL7Q6ZT98 887 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 ZNF572Q7Z3I7 529 aaPredicted RBP11.14□□□□□ -0.63
TCF4-211ENST00000561992 KRT28Q7Z3Y7 464 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 POTEDQ86YR6 584 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 RETREG2Q8NC44 543 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 NOA1Q8NC60 698 aaKnown RBP11.14□□□□□ -0.63
TCF4-211ENST00000561992 ACRBPQ8NEB7 543 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 FAM76AQ8TAV0 307 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 NOC3LQ8WTT2 800 aaKnown RBP11.14□□□□□ -0.63
TCF4-211ENST00000561992 CPLX3Q8WVH0 158 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 AIDAQ96BJ3 306 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 NUP88Q99567 741 aaPredicted RBP11.14□□□□□ -0.63
TCF4-211ENST00000561992 DNAJC7Q99615 494 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 NUP58Q9BVL2 599 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 NACAP1Q9BZK3 213 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 RIPOR2Q9Y4F9 1068 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 STRCQ7RTU9 1775 aa11.14□□□□□ -0.63
TCF4-211ENST00000561992 COL18A1P39060 1754 aa11.13□□□□□ -0.63
TCF4-211ENST00000561992 GOLGA8KD6RF30 607 aa11.13□□□□□ -0.63
TCF4-211ENST00000561992 KRT86O43790 486 aa11.13□□□□□ -0.63
TCF4-211ENST00000561992 EEF1GP26641 437 aaKnown RBP11.13□□□□□ -0.63
TCF4-211ENST00000561992 KRT9P35527 623 aa11.13□□□□□ -0.63
TCF4-211ENST00000561992 KRT2P35908 639 aa11.13□□□□□ -0.63
TCF4-211ENST00000561992 TRAPPC10P48553 1259 aa11.13□□□□□ -0.63
TCF4-211ENST00000561992 PPFIA1Q13136 1202 aa11.13□□□□□ -0.63
TCF4-211ENST00000561992 PAK1Q13153 545 aa11.13□□□□□ -0.63
TCF4-211ENST00000561992 TCP11X2Q5H9J9 407 aa11.13□□□□□ -0.63
TCF4-211ENST00000561992 SPECC1Q5M775 1068 aa11.13□□□□□ -0.63
TCF4-211ENST00000561992 MFSD6Q6ZSS7 791 aa11.13□□□□□ -0.63
TCF4-211ENST00000561992 RPAINQ86UA6 219 aa11.13□□□□□ -0.63
TCF4-211ENST00000561992 PACS2Q86VP3 889 aa11.13□□□□□ -0.63
TCF4-211ENST00000561992 CCDC170Q8IYT3 715 aa11.13□□□□□ -0.63
TCF4-211ENST00000561992 FNBP4Q8N3X1 1017 aaPredicted RBP11.13□□□□□ -0.63
TCF4-211ENST00000561992 NAPBQ9H115 298 aa11.13□□□□□ -0.63
TCF4-211ENST00000561992 ZSWIM5Q9P217 1185 aa11.13□□□□□ -0.63
TCF4-211ENST00000561992 PNPLA7Q6ZV29 1317 aa11.13□□□□□ -0.63
TCF4-211ENST00000561992 ZNF532Q9HCE3 1301 aa11.13□□□□□ -0.63
TCF4-211ENST00000561992 ZC3H4Q9UPT8 1303 aaKnown RBP11.13□□□□□ -0.63
TCF4-211ENST00000561992 MYL1P05976 194 aa11.13□□□□□ -0.63
TCF4-211ENST00000561992 RXRAP19793 462 aa11.13□□□□□ -0.63
TCF4-211ENST00000561992 CYLC1P35663 651 aaPredicted RBP11.13□□□□□ -0.63
TCF4-211ENST00000561992 AKAP17AQ02040 695 aaKnown RBP11.13□□□□□ -0.63
TCF4-211ENST00000561992 ZNF658Q5TYW1 1059 aaPredicted RBP11.13□□□□□ -0.63
TCF4-211ENST00000561992 CCNI2Q6ZMN8 369 aaPredicted RBP11.13□□□□□ -0.63
TCF4-211ENST00000561992 IFNL3Q8IZI9 196 aa11.13□□□□□ -0.63
TCF4-211ENST00000561992 ZBTB38Q8NAP3 1195 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms