RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 GABPAQ06546 454 aa9.93□□□□□ -0.82
GINS3-204ENST00000561952 USP17L24Q0WX57 530 aa9.93□□□□□ -0.82
GINS3-204ENST00000561952 IRF5Q13568 498 aa9.93□□□□□ -0.82
GINS3-204ENST00000561952 TMED8Q6PL24 325 aaPredicted RBP9.93□□□□□ -0.82
GINS3-204ENST00000561952 AMOTL1Q8IY63 956 aa9.93□□□□□ -0.82
GINS3-204ENST00000561952 PXYLP1Q8TE99 480 aa9.93□□□□□ -0.82
GINS3-204ENST00000561952 DDRGK1Q96HY6 314 aa9.93□□□□□ -0.82
GINS3-204ENST00000561952 GPATCH3Q96I76 525 aa9.93□□□□□ -0.82
GINS3-204ENST00000561952 TANGO6Q9C0B7 1094 aa9.93□□□□□ -0.82
GINS3-204ENST00000561952 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.93□□□□□ -0.82
GINS3-204ENST00000561952 PUS7LQ9H0K6 701 aaKnown RBP9.93□□□□□ -0.82
GINS3-204ENST00000561952 ECHDC1Q9NTX5 307 aa9.93□□□□□ -0.82
GINS3-204ENST00000561952 RBPJLQ9UBG7 517 aa9.93□□□□□ -0.82
GINS3-204ENST00000561952 ALPK3Q96L96 1907 aa9.93□□□□□ -0.82
GINS3-204ENST00000561952 COL11A1P12107 1806 aaPredicted RBP9.93□□□□□ -0.82
GINS3-204ENST00000561952 A0A1W2PRG0 241 aa9.92□□□□□ -0.82
GINS3-204ENST00000561952 USP17L12C9JPN9 530 aa9.92□□□□□ -0.82
GINS3-204ENST00000561952 USP17L21D6R901 530 aa9.92□□□□□ -0.82
GINS3-204ENST00000561952 H0YGN5 161 aa9.92□□□□□ -0.82
GINS3-204ENST00000561952 CNMDO75829 334 aa9.92□□□□□ -0.82
GINS3-204ENST00000561952 SGPL1O95470 568 aa9.92□□□□□ -0.82
GINS3-204ENST00000561952 ICA1Q05084 483 aa9.92□□□□□ -0.82
GINS3-204ENST00000561952 UBE3CQ15386 1083 aa9.92□□□□□ -0.82
GINS3-204ENST00000561952 ZSCAN25Q6NSZ9 544 aa9.92□□□□□ -0.82
GINS3-204ENST00000561952 POTEEQ6S8J3 1075 aa9.92□□□□□ -0.82
GINS3-204ENST00000561952 GPR142Q7Z601 462 aa9.92□□□□□ -0.82
GINS3-204ENST00000561952 RASEFQ8IZ41 740 aa9.92□□□□□ -0.82
GINS3-204ENST00000561952 SPICE1Q8N0Z3 855 aa9.92□□□□□ -0.82
GINS3-204ENST00000561952 OTUD7AQ8TE49 926 aaPredicted RBP9.92□□□□□ -0.82
GINS3-204ENST00000561952 TRIB2Q92519 343 aa9.92□□□□□ -0.82
GINS3-204ENST00000561952 C12orf42Q96LP6 360 aa9.92□□□□□ -0.82
GINS3-204ENST00000561952 CRBNQ96SW2 442 aa9.92□□□□□ -0.82
GINS3-204ENST00000561952 NUDT12Q9BQG2 462 aa9.92□□□□□ -0.82
GINS3-204ENST00000561952 KIAA1683Q9H0B3 1180 aa9.92□□□□□ -0.82
GINS3-204ENST00000561952 DCTPP1Q9H773 170 aa9.92□□□□□ -0.82
GINS3-204ENST00000561952 ATP8A2Q9NTI2 1148 aa9.92□□□□□ -0.82
GINS3-204ENST00000561952 GJD2Q9UKL4 321 aa9.92□□□□□ -0.82
GINS3-204ENST00000561952 PCDHB15Q9Y5E8 787 aa9.92□□□□□ -0.82
GINS3-204ENST00000561952 PARP14Q460N5 1801 aa9.91□□□□□ -0.82
GINS3-204ENST00000561952 FRMPD3Q5JV73 1810 aa9.91□□□□□ -0.82
GINS3-204ENST00000561952 SPDYE16A6NNV3 312 aaPredicted RBP9.91□□□□□ -0.82
GINS3-204ENST00000561952 ZKSCAN1P17029 563 aaPredicted RBP9.91□□□□□ -0.82
GINS3-204ENST00000561952 MAPK4P31152 587 aa9.91□□□□□ -0.82
GINS3-204ENST00000561952 CDK8P49336 464 aa9.91□□□□□ -0.82
GINS3-204ENST00000561952 CCL14Q16627 93 aa9.91□□□□□ -0.82
GINS3-204ENST00000561952 KIAA1755Q5JYT7 1200 aa9.91□□□□□ -0.82
GINS3-204ENST00000561952 C12orf60Q5U649 245 aa9.91□□□□□ -0.82
GINS3-204ENST00000561952 CATSPERGQ6ZRH7 1159 aa9.91□□□□□ -0.82
GINS3-204ENST00000561952 TMEM179Q6ZVK1 233 aa9.91□□□□□ -0.82
GINS3-204ENST00000561952 PLEKHH3Q7Z736 793 aa9.91□□□□□ -0.82
GINS3-204ENST00000561952 DIS3LQ8TF46 1054 aaKnown RBP9.91□□□□□ -0.82
GINS3-204ENST00000561952 SOCS4Q8WXH5 440 aa9.91□□□□□ -0.82
GINS3-204ENST00000561952 BTBD7Q9P203 1132 aa9.91□□□□□ -0.82
GINS3-204ENST00000561952 SWAP70Q9UH65 585 aa9.91□□□□□ -0.82
GINS3-204ENST00000561952 RLFQ13129 1914 aa9.91□□□□□ -0.82
GINS3-204ENST00000561952 MYH4Q9Y623 1939 aa9.91□□□□□ -0.82
GINS3-204ENST00000561952 A0A0G2JMZ2 1700 aa9.9□□□□□ -0.82
GINS3-204ENST00000561952 MINDY4BA8MYZ0 360 aa9.9□□□□□ -0.82
GINS3-204ENST00000561952 M0R2C6 588 aa9.9□□□□□ -0.82
GINS3-204ENST00000561952 RGS2P41220 211 aa9.9□□□□□ -0.82
GINS3-204ENST00000561952 PLS1Q14651 629 aa9.9□□□□□ -0.82
GINS3-204ENST00000561952 CTR9Q6PD62 1173 aa9.9□□□□□ -0.82
GINS3-204ENST00000561952 C16orf86Q6ZW13 317 aa9.9□□□□□ -0.82
GINS3-204ENST00000561952 KBTBD3Q8NAB2 608 aa9.9□□□□□ -0.82
GINS3-204ENST00000561952 GTF3C2Q8WUA4 911 aaPredicted RBP9.9□□□□□ -0.82
GINS3-204ENST00000561952 OSBP2Q969R2 916 aa9.9□□□□□ -0.82
GINS3-204ENST00000561952 GCC1Q96CN9 775 aa9.9□□□□□ -0.82
GINS3-204ENST00000561952 PAWRQ96IZ0 340 aaKnown RBP9.9□□□□□ -0.82
GINS3-204ENST00000561952 HTATIP2Q9BUP3 242 aa9.9□□□□□ -0.82
GINS3-204ENST00000561952 ARHGEF10LQ9HCE6 1279 aa9.9□□□□□ -0.82
GINS3-204ENST00000561952 HMX1Q9NP08 348 aaPredicted RBP9.9□□□□□ -0.82
GINS3-204ENST00000561952 PAK6Q9NQU5 681 aaPredicted RBP9.9□□□□□ -0.82
GINS3-204ENST00000561952 RABGAP1Q9Y3P9 1069 aa9.9□□□□□ -0.82
GINS3-204ENST00000561952 RPTORQ8N122 1335 aa9.89□□□□□ -0.83
GINS3-204ENST00000561952 RNF113AO15541 343 aaKnown RBP9.89□□□□□ -0.83
GINS3-204ENST00000561952 GPAA1O43292 621 aa9.89□□□□□ -0.83
GINS3-204ENST00000561952 FLOT1O75955 427 aa9.89□□□□□ -0.83
GINS3-204ENST00000561952 APPP05067 770 aa9.89□□□□□ -0.83
GINS3-204ENST00000561952 CCND3P30281 292 aaPredicted RBP9.89□□□□□ -0.83
GINS3-204ENST00000561952 TDO2P48775 406 aa9.89□□□□□ -0.83
GINS3-204ENST00000561952 CCNA1P78396 465 aa9.89□□□□□ -0.83
GINS3-204ENST00000561952 HABP4Q5JVS0 413 aaKnown RBP9.89□□□□□ -0.83
GINS3-204ENST00000561952 APPBP2Q92624 585 aa9.89□□□□□ -0.83
GINS3-204ENST00000561952 SEC62Q99442 399 aaKnown RBP9.89□□□□□ -0.83
GINS3-204ENST00000561952 APBA2Q99767 749 aa9.89□□□□□ -0.83
GINS3-204ENST00000561952 FSD1Q9BTV5 496 aa9.89□□□□□ -0.83
GINS3-204ENST00000561952 ARPP21Q9UBL0 812 aaPredicted RBP9.89□□□□□ -0.83
GINS3-204ENST00000561952 ZBTB47Q9UFB7 747 aaPredicted RBP9.89□□□□□ -0.83
GINS3-204ENST00000561952 IVNS1ABPQ9Y6Y0 642 aa9.89□□□□□ -0.83
GINS3-204ENST00000561952 GREB1LQ9C091 1923 aaPredicted RBP9.88□□□□□ -0.83
GINS3-204ENST00000561952 ZNFX1Q9P2E3 1918 aaKnown RBP9.88□□□□□ -0.83
GINS3-204ENST00000561952 PRDM1O75626 825 aa9.88□□□□□ -0.83
GINS3-204ENST00000561952 EEF2P13639 858 aaKnown RBP9.88□□□□□ -0.83
GINS3-204ENST00000561952 CACNB2Q08289 660 aaPredicted RBP9.88□□□□□ -0.83
GINS3-204ENST00000561952 MORN1Q5T089 497 aa9.88□□□□□ -0.83
GINS3-204ENST00000561952 ANKRD45Q5TZF3 282 aa9.88□□□□□ -0.83
GINS3-204ENST00000561952 UBE2Q1Q7Z7E8 422 aa9.88□□□□□ -0.83
GINS3-204ENST00000561952 ATG4CQ96DT6 458 aa9.88□□□□□ -0.83
GINS3-204ENST00000561952 STRBPQ96SI9 672 aaKnown RBP9.88□□□□□ -0.83
GINS3-204ENST00000561952 SH2D4AQ9H788 454 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms