RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 ERCC3P19447 782 aa22.26■■□□□ 1.15
COMMD4-204ENST00000561662 OLFML2BQ68BL8 750 aa22.26■■□□□ 1.15
COMMD4-204ENST00000561662 PPM1EQ8WY54 764 aa22.26■■□□□ 1.15
COMMD4-204ENST00000561662 SERPINB13Q9UIV8 391 aa22.26■■□□□ 1.15
COMMD4-204ENST00000561662 MYH1P12882 1939 aa22.25■■□□□ 1.15
COMMD4-204ENST00000561662 CCDC158Q5M9N0 1113 aa22.25■■□□□ 1.15
COMMD4-204ENST00000561662 SAMD1Q6SPF0 538 aaPredicted RBP22.25■■□□□ 1.15
COMMD4-204ENST00000561662 TNNQ9UQP3 1299 aa22.25■■□□□ 1.15
COMMD4-204ENST00000561662 TNFRSF10AO00220 468 aa22.24■■□□□ 1.15
COMMD4-204ENST00000561662 IDH1O75874 414 aaKnown RBP22.24■■□□□ 1.15
COMMD4-204ENST00000561662 GUCY1A2P33402 732 aa22.24■■□□□ 1.15
COMMD4-204ENST00000561662 PLS1Q14651 629 aa22.24■■□□□ 1.15
COMMD4-204ENST00000561662 SEPT2Q15019 361 aa22.24■■□□□ 1.15
COMMD4-204ENST00000561662 TNNI3KQ59H18 835 aa22.24■■□□□ 1.15
COMMD4-204ENST00000561662 TJAP1Q5JTD0 557 aa22.24■■□□□ 1.15
COMMD4-204ENST00000561662 TANGO6Q9C0B7 1094 aa22.24■■□□□ 1.15
COMMD4-204ENST00000561662 SPATC1LQ9H0A9 340 aa22.24■■□□□ 1.15
COMMD4-204ENST00000561662 CABP5Q9NP86 173 aa22.24■■□□□ 1.15
COMMD4-204ENST00000561662 FPGT-TNNI3KV9GXZ4 949 aa22.24■■□□□ 1.15
COMMD4-204ENST00000561662 PQBP1O60828 265 aaKnown RBP22.23■■□□□ 1.15
COMMD4-204ENST00000561662 SHMT1P34896 483 aa22.23■■□□□ 1.15
COMMD4-204ENST00000561662 PLCD1P51178 756 aa22.23■■□□□ 1.15
COMMD4-204ENST00000561662 EVX2Q03828 476 aa22.23■■□□□ 1.15
COMMD4-204ENST00000561662 PGK1P00558 417 aa22.22■■□□□ 1.15
COMMD4-204ENST00000561662 GNAI2P04899 355 aa22.22■■□□□ 1.15
COMMD4-204ENST00000561662 CLTBP09497 229 aa22.22■■□□□ 1.15
COMMD4-204ENST00000561662 RAG1P15918 1043 aa22.22■■□□□ 1.15
COMMD4-204ENST00000561662 DNAJB2P25686 324 aa22.22■■□□□ 1.15
COMMD4-204ENST00000561662 OS9Q13438 667 aaPredicted RBP22.22■■□□□ 1.15
COMMD4-204ENST00000561662 NCAPG2Q86XI2 1143 aa22.22■■□□□ 1.15
COMMD4-204ENST00000561662 MAGEB6Q8N7X4 407 aa22.22■■□□□ 1.15
COMMD4-204ENST00000561662 TLR7Q9NYK1 1049 aaKnown RBP22.22■■□□□ 1.15
COMMD4-204ENST00000561662 TACC3Q9Y6A5 838 aa22.22■■□□□ 1.15
COMMD4-204ENST00000561662 A0A1W2PRG0 241 aa22.21■■□□□ 1.15
COMMD4-204ENST00000561662 MPHOSPH10O00566 681 aaKnown RBP22.21■■□□□ 1.15
COMMD4-204ENST00000561662 COG2Q14746 738 aa22.21■■□□□ 1.15
COMMD4-204ENST00000561662 KIAA1755Q5JYT7 1200 aa22.21■■□□□ 1.15
COMMD4-204ENST00000561662 LENG1Q96BZ8 264 aaPredicted RBP22.21■■□□□ 1.15
COMMD4-204ENST00000561662 STRNO43815 780 aa22.2■■□□□ 1.14
COMMD4-204ENST00000561662 MAML3Q96JK9 1138 aa22.2■■□□□ 1.14
COMMD4-204ENST00000561662 EHD4Q9H223 541 aa22.2■■□□□ 1.14
COMMD4-204ENST00000561662 ZNF576Q9H609 170 aa22.2■■□□□ 1.14
COMMD4-204ENST00000561662 XPNPEP3Q9NQH7 507 aa22.2■■□□□ 1.14
COMMD4-204ENST00000561662 RARSP54136 660 aaKnown RBP22.19■■□□□ 1.14
COMMD4-204ENST00000561662 FPGSQ05932 587 aa22.19■■□□□ 1.14
COMMD4-204ENST00000561662 C1orf53Q5VUE5 145 aa22.19■■□□□ 1.14
COMMD4-204ENST00000561662 TTC6Q86TZ1 520 aa22.19■■□□□ 1.14
COMMD4-204ENST00000561662 TMEM39AQ9NV64 488 aa22.19■■□□□ 1.14
COMMD4-204ENST00000561662 HOXC10Q9NYD6 342 aa22.19■■□□□ 1.14
COMMD4-204ENST00000561662 PHF24Q9UPV7 400 aa22.19■■□□□ 1.14
COMMD4-204ENST00000561662 SMCHD1A6NHR9 2005 aa22.19■■□□□ 1.14
COMMD4-204ENST00000561662 ZNF236Q9UL36 1845 aa22.18■■□□□ 1.14
COMMD4-204ENST00000561662 TMEM265A0A087WTH1 108 aa22.18■■□□□ 1.14
COMMD4-204ENST00000561662 TAL1P17542 331 aaPredicted RBP22.18■■□□□ 1.14
COMMD4-204ENST00000561662 CLEC10AQ8IUN9 316 aa22.18■■□□□ 1.14
COMMD4-204ENST00000561662 ATG4CQ96DT6 458 aa22.18■■□□□ 1.14
COMMD4-204ENST00000561662 CCDC8Q9H0W5 538 aaPredicted RBP22.18■■□□□ 1.14
COMMD4-204ENST00000561662 SLC5A4Q9NY91 659 aa22.18■■□□□ 1.14
COMMD4-204ENST00000561662 DBNLQ9UJU6 430 aaKnown RBP22.18■■□□□ 1.14
COMMD4-204ENST00000561662 A0A1W2PQ45 241 aaPredicted RBP22.17■■□□□ 1.14
COMMD4-204ENST00000561662 A0A1W2PQY0 241 aa22.17■■□□□ 1.14
COMMD4-204ENST00000561662 KIAA0355O15063 1070 aa22.17■■□□□ 1.14
COMMD4-204ENST00000561662 POLR3DP05423 398 aaPredicted RBP22.17■■□□□ 1.14
COMMD4-204ENST00000561662 PGK2P07205 417 aa22.17■■□□□ 1.14
COMMD4-204ENST00000561662 RARBP10826 455 aa22.17■■□□□ 1.14
COMMD4-204ENST00000561662 SPICE1Q8N0Z3 855 aa22.17■■□□□ 1.14
COMMD4-204ENST00000561662 SHCBP1Q8NEM2 672 aa22.17■■□□□ 1.14
COMMD4-204ENST00000561662 CLUAP1Q96AJ1 413 aa22.17■■□□□ 1.14
COMMD4-204ENST00000561662 TIFAQ96CG3 184 aa22.17■■□□□ 1.14
COMMD4-204ENST00000561662 ANTXR1Q9H6X2 564 aa22.17■■□□□ 1.14
COMMD4-204ENST00000561662 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.16■■□□□ 1.14
COMMD4-204ENST00000561662 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.16■■□□□ 1.14
COMMD4-204ENST00000561662 GRXCR1A8MXD5 290 aa22.16■■□□□ 1.14
COMMD4-204ENST00000561662 FLOT1O75955 427 aa22.16■■□□□ 1.14
COMMD4-204ENST00000561662 PBX2P40425 430 aa22.16■■□□□ 1.14
COMMD4-204ENST00000561662 GPR108Q9NPR9 543 aa22.16■■□□□ 1.14
COMMD4-204ENST00000561662 BCAR3O75815 825 aa22.15■■□□□ 1.14
COMMD4-204ENST00000561662 CENPBP07199 599 aaPredicted RBP22.15■■□□□ 1.14
COMMD4-204ENST00000561662 CT47B1P0C2W7 299 aaPredicted RBP22.15■■□□□ 1.14
COMMD4-204ENST00000561662 TRIM27P14373 513 aa22.15■■□□□ 1.14
COMMD4-204ENST00000561662 DSG3P32926 999 aa22.15■■□□□ 1.14
COMMD4-204ENST00000561662 FAAP100Q0VG06 881 aa22.15■■□□□ 1.14
COMMD4-204ENST00000561662 CCDC85BQ15834 202 aaPredicted RBP22.15■■□□□ 1.14
COMMD4-204ENST00000561662 RNF180Q86T96 592 aa22.15■■□□□ 1.14
COMMD4-204ENST00000561662 PRDM12Q9H4Q4 367 aa22.15■■□□□ 1.14
COMMD4-204ENST00000561662 MROH8Q9H579 483 aa22.15■■□□□ 1.14
COMMD4-204ENST00000561662 SURF6O75683 361 aaKnown RBP22.14■■□□□ 1.13
COMMD4-204ENST00000561662 FCER1AP12319 257 aa22.14■■□□□ 1.13
COMMD4-204ENST00000561662 CCDC129Q6ZRS4 1044 aa22.14■■□□□ 1.13
COMMD4-204ENST00000561662 SLC44A5Q8NCS7 719 aa22.14■■□□□ 1.13
COMMD4-204ENST00000561662 ARHGAP45Q92619 1136 aa22.14■■□□□ 1.13
COMMD4-204ENST00000561662 FRAT1Q92837 279 aaPredicted RBP22.14■■□□□ 1.13
COMMD4-204ENST00000561662 ZNF512BQ96KM6 892 aaPredicted RBP22.14■■□□□ 1.13
COMMD4-204ENST00000561662 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.14■■□□□ 1.13
COMMD4-204ENST00000561662 A0A0G2JMZ2 1700 aa22.14■■□□□ 1.13
COMMD4-204ENST00000561662 C1orf115Q9H7X2 142 aa22.13■■□□□ 1.13
COMMD4-204ENST00000561662 CYP2D6P10635 497 aa22.12■■□□□ 1.13
COMMD4-204ENST00000561662 GABPAQ06546 454 aa22.12■■□□□ 1.13
COMMD4-204ENST00000561662 POLA2Q14181 598 aa22.12■■□□□ 1.13
COMMD4-204ENST00000561662 TMEM132BQ14DG7 1078 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms