RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	FSCN2	O14926	492 aa		9.64	□□□□□ -0.87
MARK3-223	ENST00000561071	ZNF157	P51786	506 aa	Predicted RBP	9.64	□□□□□ -0.87
MARK3-223	ENST00000561071	PTPN12	Q05209	780 aa	Known RBP	9.64	□□□□□ -0.87
MARK3-223	ENST00000561071	MPRIP	Q6WCQ1	1025 aa		9.64	□□□□□ -0.87
MARK3-223	ENST00000561071	FMR1NB	Q8N0W7	255 aa	Predicted RBP	9.64	□□□□□ -0.87
MARK3-223	ENST00000561071	GALNT11	Q8NCW6	608 aa		9.64	□□□□□ -0.87
MARK3-223	ENST00000561071	SYT17	Q9BSW7	474 aa		9.64	□□□□□ -0.87
MARK3-223	ENST00000561071	PANK3	Q9H999	370 aa		9.64	□□□□□ -0.87
MARK3-223	ENST00000561071	WASHC2A	Q641Q2	1341 aa		9.63	□□□□□ -0.87
MARK3-223	ENST00000561071	FBXO24	O75426	580 aa		9.63	□□□□□ -0.87
MARK3-223	ENST00000561071	XRCC5	P13010	732 aa	Known RBP	9.63	□□□□□ -0.87
MARK3-223	ENST00000561071	RBM25	P49756	843 aa	Known RBP	9.63	□□□□□ -0.87
MARK3-223	ENST00000561071	TRIM28	Q13263	835 aa	Known RBP	9.63	□□□□□ -0.87
MARK3-223	ENST00000561071	MEI1	Q5TIA1	1274 aa		9.63	□□□□□ -0.87
MARK3-223	ENST00000561071	FAM117B	Q6P1L5	589 aa		9.63	□□□□□ -0.87
MARK3-223	ENST00000561071	MRRF	Q96E11	262 aa	Known RBP	9.63	□□□□□ -0.87
MARK3-223	ENST00000561071	NOP53	Q9NZM5	478 aa	Known RBP	9.63	□□□□□ -0.87
MARK3-223	ENST00000561071	PCDH11X	Q9BZA7	1347 aa		9.62	□□□□□ -0.87
MARK3-223	ENST00000561071	PCDH11Y	Q9BZA8	1340 aa		9.62	□□□□□ -0.87
MARK3-223	ENST00000561071	TM4SF5	O14894	197 aa		9.62	□□□□□ -0.87
MARK3-223	ENST00000561071	EIF4A2	Q14240	407 aa	Known RBP	9.62	□□□□□ -0.87
MARK3-223	ENST00000561071	SMIM5	Q71RC9	77 aa		9.62	□□□□□ -0.87
MARK3-223	ENST00000561071	KLHDC7B	Q96G42	594 aa		9.62	□□□□□ -0.87
MARK3-223	ENST00000561071	KIAA1522	Q9P206	1035 aa	Predicted RBP	9.62	□□□□□ -0.87
MARK3-223	ENST00000561071	UTRN	P46939	3433 aa		9.62	□□□□□ -0.87
MARK3-223	ENST00000561071	KIF24	Q5T7B8	1368 aa		9.62	□□□□□ -0.87
MARK3-223	ENST00000561071	SPDYE3	A6NKU9	549 aa		9.61	□□□□□ -0.87
MARK3-223	ENST00000561071	RAC1	P63000	192 aa		9.61	□□□□□ -0.87
MARK3-223	ENST00000561071	TPTE2	Q6XPS3	522 aa		9.61	□□□□□ -0.87
MARK3-223	ENST00000561071	COL23A1	Q86Y22	540 aa	Predicted RBP	9.61	□□□□□ -0.87
MARK3-223	ENST00000561071	DTWD1	Q8N5C7	304 aa		9.61	□□□□□ -0.87
MARK3-223	ENST00000561071	PIGB	Q92521	554 aa		9.61	□□□□□ -0.87
MARK3-223	ENST00000561071	SEC31B	Q9NQW1	1179 aa		9.61	□□□□□ -0.87
MARK3-223	ENST00000561071	TTF2	Q9UNY4	1162 aa	Known RBP	9.61	□□□□□ -0.87
MARK3-223	ENST00000561071	DDX3Y	O15523	660 aa	Known RBP	9.6	□□□□□ -0.87
MARK3-223	ENST00000561071	B3GALT4	O96024	378 aa		9.6	□□□□□ -0.87
MARK3-223	ENST00000561071	GRIK4	Q16099	956 aa		9.6	□□□□□ -0.87
MARK3-223	ENST00000561071	PRRT3	Q5FWE3	981 aa		9.6	□□□□□ -0.87
MARK3-223	ENST00000561071	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	9.6	□□□□□ -0.87
MARK3-223	ENST00000561071	FBXO11	Q86XK2	927 aa		9.6	□□□□□ -0.87
MARK3-223	ENST00000561071	CRELD1	Q96HD1	420 aa		9.6	□□□□□ -0.87
MARK3-223	ENST00000561071	GPN3	Q9UHW5	284 aa	Predicted RBP	9.6	□□□□□ -0.87
MARK3-223	ENST00000561071	MAP2	P11137	1827 aa	Known RBP	9.6	□□□□□ -0.87
MARK3-223	ENST00000561071	PALLD	Q8WX93	1383 aa		9.6	□□□□□ -0.87
MARK3-223	ENST00000561071	C19orf57	Q0VDD7	668 aa		9.59	□□□□□ -0.87
MARK3-223	ENST00000561071	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	9.59	□□□□□ -0.87
MARK3-223	ENST00000561071	FOXD4L3	Q6VB84	417 aa	Predicted RBP	9.59	□□□□□ -0.87
MARK3-223	ENST00000561071	AMIGO3	Q86WK7	504 aa		9.59	□□□□□ -0.87
MARK3-223	ENST00000561071	OSGEP	Q9NPF4	335 aa		9.59	□□□□□ -0.87
MARK3-223	ENST00000561071	KCNK4	Q9NYG8	393 aa		9.59	□□□□□ -0.87
MARK3-223	ENST00000561071	LY75	O60449	1722 aa		9.59	□□□□□ -0.87
MARK3-223	ENST00000561071	TUBGCP6	Q96RT7	1819 aa		9.59	□□□□□ -0.88
MARK3-223	ENST00000561071	NCAPD2	Q15021	1401 aa		9.58	□□□□□ -0.88
MARK3-223	ENST00000561071	DLL1	O00548	723 aa		9.58	□□□□□ -0.88
MARK3-223	ENST00000561071	ADAM11	O75078	769 aa		9.58	□□□□□ -0.88
MARK3-223	ENST00000561071	PHKG2	P15735	406 aa		9.58	□□□□□ -0.88
MARK3-223	ENST00000561071	POLD1	P28340	1107 aa		9.58	□□□□□ -0.88
MARK3-223	ENST00000561071	ARL4D	P49703	201 aa		9.58	□□□□□ -0.88
MARK3-223	ENST00000561071	GSTM4	Q03013	218 aa		9.58	□□□□□ -0.88
MARK3-223	ENST00000561071	LDLRAD1	Q5T700	205 aa		9.58	□□□□□ -0.88
MARK3-223	ENST00000561071	SHISA2	Q6UWI4	295 aa		9.58	□□□□□ -0.88
MARK3-223	ENST00000561071	MORC1	Q86VD1	984 aa		9.58	□□□□□ -0.88
MARK3-223	ENST00000561071	MAP4K3	Q8IVH8	894 aa		9.58	□□□□□ -0.88
MARK3-223	ENST00000561071	KLHL23	Q8NBE8	558 aa		9.58	□□□□□ -0.88
MARK3-223	ENST00000561071	NLGN2	Q8NFZ4	835 aa		9.58	□□□□□ -0.88
MARK3-223	ENST00000561071	WNT8B	Q93098	351 aa		9.58	□□□□□ -0.88
MARK3-223	ENST00000561071	BACH2	Q9BYV9	841 aa		9.58	□□□□□ -0.88
MARK3-223	ENST00000561071	BCL11A	Q9H165	835 aa		9.58	□□□□□ -0.88
MARK3-223	ENST00000561071	ZFYVE1	Q9HBF4	777 aa		9.58	□□□□□ -0.88
MARK3-223	ENST00000561071	SRA1	Q9HD15	236 aa	Known RBP	9.58	□□□□□ -0.88
MARK3-223	ENST00000561071	ASAP1	Q9ULH1	1129 aa		9.58	□□□□□ -0.88
MARK3-223	ENST00000561071	PPM1H	Q9ULR3	514 aa		9.58	□□□□□ -0.88
MARK3-223	ENST00000561071	TOGARAM1	Q9Y4F4	1720 aa		9.58	□□□□□ -0.88
MARK3-223	ENST00000561071	RECK	O95980	971 aa		9.57	□□□□□ -0.88
MARK3-223	ENST00000561071	SPATA31C1	P0DKV0	1188 aa		9.57	□□□□□ -0.88
MARK3-223	ENST00000561071	ELN	P15502	786 aa		9.57	□□□□□ -0.88
MARK3-223	ENST00000561071	CD68	P34810	354 aa	Predicted RBP	9.57	□□□□□ -0.88
MARK3-223	ENST00000561071	NLRP12	P59046	1061 aa		9.57	□□□□□ -0.88
MARK3-223	ENST00000561071	GPR162	Q16538	588 aa		9.57	□□□□□ -0.88
MARK3-223	ENST00000561071	TSNAXIP1	Q2TAA8	658 aa		9.57	□□□□□ -0.88
MARK3-223	ENST00000561071	SOX17	Q9H6I2	414 aa	Predicted RBP	9.57	□□□□□ -0.88
MARK3-223	ENST00000561071	TMOD3	Q9NYL9	352 aa		9.57	□□□□□ -0.88
MARK3-223	ENST00000561071	ANKRD26	Q9UPS8	1709 aa		9.56	□□□□□ -0.88
MARK3-223	ENST00000561071	RNF225	M0QZC1	329 aa	Predicted RBP	9.56	□□□□□ -0.88
MARK3-223	ENST00000561071	ENC1	O14682	589 aa		9.56	□□□□□ -0.88
MARK3-223	ENST00000561071	CELA3A	P09093	270 aa		9.56	□□□□□ -0.88
MARK3-223	ENST00000561071	ITPK1	Q13572	414 aa		9.56	□□□□□ -0.88
MARK3-223	ENST00000561071	SUZ12	Q15022	739 aa	Known RBP	9.56	□□□□□ -0.88
MARK3-223	ENST00000561071	TAF1C	Q15572	869 aa	Predicted RBP	9.56	□□□□□ -0.88
MARK3-223	ENST00000561071	IFNL2	Q8IZJ0	200 aa		9.56	□□□□□ -0.88
MARK3-223	ENST00000561071	LINC00116	Q8NCU8	138 aa		9.56	□□□□□ -0.88
MARK3-223	ENST00000561071	SMARCC1	Q92922	1105 aa	Predicted RBP	9.56	□□□□□ -0.88
MARK3-223	ENST00000561071	NECAB3	Q96P71	396 aa	Predicted RBP	9.56	□□□□□ -0.88
MARK3-223	ENST00000561071	TRIM56	Q9BRZ2	755 aa	Known RBP	9.56	□□□□□ -0.88
MARK3-223	ENST00000561071	ATG3	Q9NT62	314 aa		9.56	□□□□□ -0.88
MARK3-223	ENST00000561071	TMEM39A	Q9NV64	488 aa		9.56	□□□□□ -0.88
MARK3-223	ENST00000561071	KNSTRN	Q9Y448	316 aa		9.56	□□□□□ -0.88
MARK3-223	ENST00000561071	ITGB4	P16144	1822 aa		9.56	□□□□□ -0.88
MARK3-223	ENST00000561071	PKD1L3	Q7Z443	1732 aa		9.56	□□□□□ -0.88
MARK3-223	ENST00000561071	PAGE1	O75459	146 aa		9.55	□□□□□ -0.88

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