RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 GLRX3O76003 335 aaKnown RBP19.15■□□□□ 0.66
LMX1B-204ENST00000561065 SLC34A2O95436 690 aa19.15■□□□□ 0.66
LMX1B-204ENST00000561065 SGPL1O95470 568 aa19.15■□□□□ 0.66
LMX1B-204ENST00000561065 GCC1Q96CN9 775 aa19.15■□□□□ 0.66
LMX1B-204ENST00000561065 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.15■□□□□ 0.66
LMX1B-204ENST00000561065 TMX2Q9Y320 296 aa19.15■□□□□ 0.66
LMX1B-204ENST00000561065 ZFYP08048 801 aaPredicted RBP19.14■□□□□ 0.65
LMX1B-204ENST00000561065 HDAC1Q13547 482 aaPredicted RBP19.14■□□□□ 0.65
LMX1B-204ENST00000561065 CCL14Q16627 93 aa19.14■□□□□ 0.65
LMX1B-204ENST00000561065 SBK1Q52WX2 424 aa19.14■□□□□ 0.65
LMX1B-204ENST00000561065 AMOTL1Q8IY63 956 aa19.14■□□□□ 0.65
LMX1B-204ENST00000561065 SPICE1Q8N0Z3 855 aa19.14■□□□□ 0.65
LMX1B-204ENST00000561065 DDRGK1Q96HY6 314 aa19.14■□□□□ 0.65
LMX1B-204ENST00000561065 CCDC17Q96LX7 622 aa19.14■□□□□ 0.65
LMX1B-204ENST00000561065 NUDT12Q9BQG2 462 aa19.14■□□□□ 0.65
LMX1B-204ENST00000561065 CRISPLD2Q9H0B8 497 aa19.14■□□□□ 0.65
LMX1B-204ENST00000561065 RWDD1Q9H446 243 aaPredicted RBP19.14■□□□□ 0.65
LMX1B-204ENST00000561065 ERC2O15083 957 aa19.13■□□□□ 0.65
LMX1B-204ENST00000561065 FARP2O94887 1054 aaPredicted RBP19.13■□□□□ 0.65
LMX1B-204ENST00000561065 RASA1P20936 1047 aa19.13■□□□□ 0.65
LMX1B-204ENST00000561065 MAP3K21Q5TCX8 1036 aa19.13■□□□□ 0.65
LMX1B-204ENST00000561065 GIMAP6Q6P9H5 292 aa19.13■□□□□ 0.65
LMX1B-204ENST00000561065 PLEKHH3Q7Z736 793 aa19.13■□□□□ 0.65
LMX1B-204ENST00000561065 STK11IPQ8N1F8 1099 aa19.13■□□□□ 0.65
LMX1B-204ENST00000561065 TANGO6Q9C0B7 1094 aa19.13■□□□□ 0.65
LMX1B-204ENST00000561065 VCPKMTQ9H867 229 aa19.13■□□□□ 0.65
LMX1B-204ENST00000561065 ARHGEF10LQ9HCE6 1279 aa19.13■□□□□ 0.65
LMX1B-204ENST00000561065 XRCC5P13010 732 aaKnown RBP19.12■□□□□ 0.65
LMX1B-204ENST00000561065 EEF2P13639 858 aaKnown RBP19.12■□□□□ 0.65
LMX1B-204ENST00000561065 ANKRD45Q5TZF3 282 aa19.12■□□□□ 0.65
LMX1B-204ENST00000561065 APBA2Q99767 749 aa19.12■□□□□ 0.65
LMX1B-204ENST00000561065 FSD1Q9BTV5 496 aa19.12■□□□□ 0.65
LMX1B-204ENST00000561065 FOXP2O15409 715 aa19.11■□□□□ 0.65
LMX1B-204ENST00000561065 ZMYM1Q5SVZ6 1142 aa19.11■□□□□ 0.65
LMX1B-204ENST00000561065 DIS3LQ8TF46 1054 aaKnown RBP19.11■□□□□ 0.65
LMX1B-204ENST00000561065 LPAR1Q92633 364 aa19.11■□□□□ 0.65
LMX1B-204ENST00000561065 RANBP2P49792 3224 aaKnown RBP19.11■□□□□ 0.65
LMX1B-204ENST00000561065 RPTORQ8N122 1335 aa19.1■□□□□ 0.65
LMX1B-204ENST00000561065 MINDY4BA8MYZ0 360 aa19.1■□□□□ 0.65
LMX1B-204ENST00000561065 PRKAR2AP13861 404 aaKnown RBP19.1■□□□□ 0.65
LMX1B-204ENST00000561065 ZKSCAN1P17029 563 aaPredicted RBP19.1■□□□□ 0.65
LMX1B-204ENST00000561065 RGS2P41220 211 aa19.1■□□□□ 0.65
LMX1B-204ENST00000561065 MAP2K5Q13163 448 aa19.1■□□□□ 0.65
LMX1B-204ENST00000561065 ATG4CQ96DT6 458 aa19.1■□□□□ 0.65
LMX1B-204ENST00000561065 MOV10L1Q9BXT6 1211 aaKnown RBP19.1■□□□□ 0.65
LMX1B-204ENST00000561065 FLRT1Q9NZU1 646 aa19.1■□□□□ 0.65
LMX1B-204ENST00000561065 SUPT16HQ9Y5B9 1047 aaKnown RBP19.1■□□□□ 0.65
LMX1B-204ENST00000561065 WDR46O15213 610 aaKnown RBP19.09■□□□□ 0.65
LMX1B-204ENST00000561065 GNAT2P19087 354 aa19.09■□□□□ 0.65
LMX1B-204ENST00000561065 PTPREP23469 700 aa19.09■□□□□ 0.65
LMX1B-204ENST00000561065 DSG3P32926 999 aa19.09■□□□□ 0.65
LMX1B-204ENST00000561065 TDO2P48775 406 aa19.09■□□□□ 0.65
LMX1B-204ENST00000561065 MNX1P50219 401 aaPredicted RBP19.09■□□□□ 0.65
LMX1B-204ENST00000561065 CCNA1P78396 465 aa19.09■□□□□ 0.65
LMX1B-204ENST00000561065 ATP2B2Q01814 1243 aa19.09■□□□□ 0.65
LMX1B-204ENST00000561065 GRB14Q14449 540 aa19.09■□□□□ 0.65
LMX1B-204ENST00000561065 COG2Q14746 738 aa19.09■□□□□ 0.65
LMX1B-204ENST00000561065 WDR78Q5VTH9 848 aa19.09■□□□□ 0.65
LMX1B-204ENST00000561065 CCDC129Q6ZRS4 1044 aa19.09■□□□□ 0.65
LMX1B-204ENST00000561065 CCAR1Q8IX12 1150 aaKnown RBP19.09■□□□□ 0.65
LMX1B-204ENST00000561065 IFNL3Q8IZI9 196 aa19.09■□□□□ 0.65
LMX1B-204ENST00000561065 SH2D4AQ9H788 454 aa19.09■□□□□ 0.65
LMX1B-204ENST00000561065 KANSL2Q9H9L4 492 aa19.09■□□□□ 0.65
LMX1B-204ENST00000561065 HMX1Q9NP08 348 aaPredicted RBP19.09■□□□□ 0.65
LMX1B-204ENST00000561065 FBXO28Q9NVF7 368 aa19.09■□□□□ 0.65
LMX1B-204ENST00000561065 STAP2Q9UGK3 403 aa19.09■□□□□ 0.65
LMX1B-204ENST00000561065 IGKV6D-41A0A0C4DH26 115 aa19.08■□□□□ 0.65
LMX1B-204ENST00000561065 H0YGN5 161 aa19.08■□□□□ 0.65
LMX1B-204ENST00000561065 FLOT1O75955 427 aa19.08■□□□□ 0.65
LMX1B-204ENST00000561065 TFRCP02786 760 aaKnown RBP19.08■□□□□ 0.65
LMX1B-204ENST00000561065 PDE1AP54750 535 aa19.08■□□□□ 0.65
LMX1B-204ENST00000561065 CACNB2Q08289 660 aaPredicted RBP19.08■□□□□ 0.65
LMX1B-204ENST00000561065 SPATC1LQ9H0A9 340 aa19.08■□□□□ 0.65
LMX1B-204ENST00000561065 ZNFX1Q9P2E3 1918 aaKnown RBP19.08■□□□□ 0.64
LMX1B-204ENST00000561065 SLC15A5A6NIM6 579 aa19.07■□□□□ 0.64
LMX1B-204ENST00000561065 PATL2C9JE40 543 aaKnown RBP19.07■□□□□ 0.64
LMX1B-204ENST00000561065 PRDM1O75626 825 aa19.07■□□□□ 0.64
LMX1B-204ENST00000561065 CCND3P30281 292 aaPredicted RBP19.07■□□□□ 0.64
LMX1B-204ENST00000561065 NPLOC4Q8TAT6 608 aa19.07■□□□□ 0.64
LMX1B-204ENST00000561065 CWC22Q9HCG8 908 aaKnown RBP19.07■□□□□ 0.64
LMX1B-204ENST00000561065 PLIN4Q96Q06 1357 aa19.07■□□□□ 0.64
LMX1B-204ENST00000561065 PLXNA1Q9UIW2 1896 aa19.07■□□□□ 0.64
LMX1B-204ENST00000561065 APPP05067 770 aa19.06■□□□□ 0.64
LMX1B-204ENST00000561065 SMC5Q8IY18 1101 aa19.06■□□□□ 0.64
LMX1B-204ENST00000561065 EXOC6Q8TAG9 804 aa19.06■□□□□ 0.64
LMX1B-204ENST00000561065 PAWRQ96IZ0 340 aaKnown RBP19.06■□□□□ 0.64
LMX1B-204ENST00000561065 LNPKQ9C0E8 428 aa19.06■□□□□ 0.64
LMX1B-204ENST00000561065 HOXC10Q9NYD6 342 aa19.06■□□□□ 0.64
LMX1B-204ENST00000561065 IGHA2P01877 340 aa19.05■□□□□ 0.64
LMX1B-204ENST00000561065 HOXC6P09630 235 aa19.05■□□□□ 0.64
LMX1B-204ENST00000561065 ERCC3P19447 782 aa19.05■□□□□ 0.64
LMX1B-204ENST00000561065 FAM83BQ5T0W9 1011 aa19.05■□□□□ 0.64
LMX1B-204ENST00000561065 VPS53Q5VIR6 699 aa19.05■□□□□ 0.64
LMX1B-204ENST00000561065 SAMD1Q6SPF0 538 aaPredicted RBP19.05■□□□□ 0.64
LMX1B-204ENST00000561065 TRMT44Q8IYL2 757 aaKnown RBP19.05■□□□□ 0.64
LMX1B-204ENST00000561065 MB21D1Q8N884 522 aa19.05■□□□□ 0.64
LMX1B-204ENST00000561065 NUP88Q99567 741 aaPredicted RBP19.05■□□□□ 0.64
LMX1B-204ENST00000561065 MKNK2Q9HBH9 465 aa19.05■□□□□ 0.64
LMX1B-204ENST00000561065 OGDHLQ9ULD0 1010 aa19.05■□□□□ 0.64
LMX1B-204ENST00000561065 IGHDP01880 384 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms